RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 LCA5Q86VQ0 697 aa19.38■□□□□ 0.69
SRSF1-206ENST00000583741 CENPLQ8N0S6 344 aaPredicted RBP19.38■□□□□ 0.69
SRSF1-206ENST00000583741 ZNF808Q8N4W9 903 aaPredicted RBP19.38■□□□□ 0.69
SRSF1-206ENST00000583741 RAB42Q8N4Z0 105 aa19.38■□□□□ 0.69
SRSF1-206ENST00000583741 ANKRD42Q8N9B4 389 aa19.38■□□□□ 0.69
SRSF1-206ENST00000583741 CD200R1Q8TD46 325 aa19.38■□□□□ 0.69
SRSF1-206ENST00000583741 LURAP1Q96LR2 239 aa19.38■□□□□ 0.69
SRSF1-206ENST00000583741 RIC8BQ9NVN3 520 aa19.38■□□□□ 0.69
SRSF1-206ENST00000583741 GALPQ9UBC7 116 aa19.38■□□□□ 0.69
SRSF1-206ENST00000583741 SEC14L3Q9UDX4 400 aa19.38■□□□□ 0.69
SRSF1-206ENST00000583741 TSR3Q9UJK0 312 aaKnown RBP19.38■□□□□ 0.69
SRSF1-206ENST00000583741 RUVBL1Q9Y265 456 aaKnown RBP19.38■□□□□ 0.69
SRSF1-206ENST00000583741 CACNA1CQ13936 2221 aa19.38■□□□□ 0.69
SRSF1-206ENST00000583741 WFS1O76024 890 aa19.37■□□□□ 0.69
SRSF1-206ENST00000583741 CCDC166P0CW27 439 aa19.37■□□□□ 0.69
SRSF1-206ENST00000583741 PTGER4P35408 488 aa19.37■□□□□ 0.69
SRSF1-206ENST00000583741 SLC26A3P40879 764 aa19.37■□□□□ 0.69
SRSF1-206ENST00000583741 PMP22Q01453 160 aa19.37■□□□□ 0.69
SRSF1-206ENST00000583741 PCOLCEQ15113 449 aa19.37■□□□□ 0.69
SRSF1-206ENST00000583741 ZNF630Q2M218 657 aaPredicted RBP19.37■□□□□ 0.69
SRSF1-206ENST00000583741 HKDC1Q2TB90 917 aa19.37■□□□□ 0.69
SRSF1-206ENST00000583741 PAQR3Q6TCH7 311 aa19.37■□□□□ 0.69
SRSF1-206ENST00000583741 RIPOR1Q6ZS17 1223 aa19.37■□□□□ 0.69
SRSF1-206ENST00000583741 OTOAQ7RTW8 1153 aa19.37■□□□□ 0.69
SRSF1-206ENST00000583741 PLD6Q8N2A8 252 aaKnown RBP19.37■□□□□ 0.69
SRSF1-206ENST00000583741 GIMAP7Q8NHV1 300 aa19.37■□□□□ 0.69
SRSF1-206ENST00000583741 KCTD4Q8WVF5 259 aa19.37■□□□□ 0.69
SRSF1-206ENST00000583741 YIPF2Q9BWQ6 316 aa19.37■□□□□ 0.69
SRSF1-206ENST00000583741 C14orf105Q9NVL8 296 aa19.37■□□□□ 0.69
SRSF1-206ENST00000583741 GRID1Q9ULK0 1009 aa19.37■□□□□ 0.69
SRSF1-206ENST00000583741 DHRS7Q9Y394 339 aa19.37■□□□□ 0.69
SRSF1-206ENST00000583741 SCN2AQ99250 2005 aa19.37■□□□□ 0.69
SRSF1-206ENST00000583741 LOC102723996A0A087X1L8 192 aa19.36■□□□□ 0.69
SRSF1-206ENST00000583741 IGKV1-8A0A0C4DH67 115 aa19.36■□□□□ 0.69
SRSF1-206ENST00000583741 KLHL2O95198 593 aa19.36■□□□□ 0.69
SRSF1-206ENST00000583741 RASAL1O95294 804 aa19.36■□□□□ 0.69
SRSF1-206ENST00000583741 HEXBP07686 556 aa19.36■□□□□ 0.69
SRSF1-206ENST00000583741 CHN1P15882 459 aa19.36■□□□□ 0.69
SRSF1-206ENST00000583741 EMP3P54852 163 aa19.36■□□□□ 0.69
SRSF1-206ENST00000583741 SYT16Q17RD7 645 aa19.36■□□□□ 0.69
SRSF1-206ENST00000583741 TSNAXIP1Q2TAA8 658 aa19.36■□□□□ 0.69
SRSF1-206ENST00000583741 CSNK1A1LQ8N752 337 aa19.36■□□□□ 0.69
SRSF1-206ENST00000583741 ANKRD49Q8WVL7 239 aa19.36■□□□□ 0.69
SRSF1-206ENST00000583741 UBXN10Q96LJ8 280 aa19.36■□□□□ 0.69
SRSF1-206ENST00000583741 SLC30A3Q99726 388 aa19.36■□□□□ 0.69
SRSF1-206ENST00000583741 TRIM8Q9BZR9 551 aa19.36■□□□□ 0.69
SRSF1-206ENST00000583741 RNF32Q9H0A6 362 aa19.36■□□□□ 0.69
SRSF1-206ENST00000583741 ZNF358Q9NW07 568 aa19.36■□□□□ 0.69
SRSF1-206ENST00000583741 SPATA7Q9P0W8 599 aa19.36■□□□□ 0.69
SRSF1-206ENST00000583741 SLC17A7Q9P2U7 560 aa19.36■□□□□ 0.69
SRSF1-206ENST00000583741 CDC14AQ9UNH5 594 aa19.36■□□□□ 0.69
SRSF1-206ENST00000583741 PLLPQ9Y342 182 aa19.36■□□□□ 0.69
SRSF1-206ENST00000583741 NF1P21359 2839 aa19.36■□□□□ 0.69
SRSF1-206ENST00000583741 CRYABP02511 175 aaKnown RBP19.35■□□□□ 0.69
SRSF1-206ENST00000583741 LTA4HP09960 611 aaKnown RBP19.35■□□□□ 0.69
SRSF1-206ENST00000583741 CMPK1P30085 196 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 DLG1Q12959 904 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 CSHL1Q14406 222 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 FAM83EQ2M2I3 478 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.35■□□□□ 0.69
SRSF1-206ENST00000583741 SUSD1Q6UWL2 747 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 RPTNQ6XPR3 784 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 SPNS2Q8IVW8 549 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 ARHGEF39Q8N4T4 335 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 NKAPQ8N5F7 415 aaKnown RBP19.35■□□□□ 0.69
SRSF1-206ENST00000583741 DNAJB8Q8NHS0 232 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 MGARPQ8TDB4 240 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 NXNL1Q96CM4 212 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 MVB12AQ96EY5 273 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 MMABQ96EY8 250 aaPredicted RBP19.35■□□□□ 0.69
SRSF1-206ENST00000583741 FAM111AQ96PZ2 611 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 PLCD4Q9BRC7 762 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 TGIF2Q9GZN2 237 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 ZNF700Q9H0M5 742 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 C12orf65Q9H3J6 166 aaKnown RBP19.35■□□□□ 0.69
SRSF1-206ENST00000583741 CHST11Q9NPF2 352 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 OR5H15A6NDH6 313 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 FOXS1O43638 330 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 PRAMEF2O60811 474 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 ERGP11308 486 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 GYS2P54840 703 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 IL2P60568 153 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 SNRPNP63162 240 aaKnown RBP19.35■□□□□ 0.69
SRSF1-206ENST00000583741 TTLL9Q3SXZ7 439 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 TMEM205Q6UW68 189 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 NEK10Q6ZWH5 1172 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 PAQR7Q86WK9 346 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 ZC3H7AQ8IWR0 971 aaKnown RBP19.35■□□□□ 0.69
SRSF1-206ENST00000583741 CPNE9Q8IYJ1 553 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 SPATA6LQ8N4H0 392 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 FOPNLQ96NB1 174 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 MKKSQ9NPJ1 570 aaPredicted RBP19.35■□□□□ 0.69
SRSF1-206ENST00000583741 IGSF5Q9NSI5 407 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 TMEM216Q9P0N5 145 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 KLHL42Q9P2K6 505 aa19.35■□□□□ 0.69
SRSF1-206ENST00000583741 MTORP42345 2549 aa19.34■□□□□ 0.69
SRSF1-206ENST00000583741 KPNA5O15131 536 aa19.34■□□□□ 0.69
SRSF1-206ENST00000583741 MATN4O95460 622 aa19.34■□□□□ 0.69
SRSF1-206ENST00000583741 COX6B1P14854 86 aa19.34■□□□□ 0.69
SRSF1-206ENST00000583741 ADORA2A-AS1P86434 159 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms