RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 CLPTM1O96005 669 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 HTR1BP28222 390 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 GRK3P35626 688 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 ALDH3A2P51648 485 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 PRDX1Q06830 199 aaKnown RBP21.66■■□□□ 1.06
CCDC47-204ENST00000582252 DAG1Q14118 895 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 IYDQ6PHW0 289 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 TBC1D19Q8N5T2 526 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 TSTD1Q8NFU3 115 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 CLDN23Q96B33 292 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 MYOCQ99972 504 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 CHRDQ9H2X0 955 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 NTN4Q9HB63 628 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 EXO1Q9UQ84 846 aaKnown RBP21.66■■□□□ 1.06
CCDC47-204ENST00000582252 MYRFQ9Y2G1 1151 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 H7BY64 318 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 DLGAP1O14490 977 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 CAPN5O15484 640 aaPredicted RBP21.66■■□□□ 1.06
CCDC47-204ENST00000582252 GBAP04062 536 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 SMIM18P0DKX4 95 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 PSMB5P28074 263 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 GSTM2P28161 218 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 NDUFS1P28331 727 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 CAPGP40121 348 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 TPMTP51580 245 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 ARSFP54793 590 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 ABATP80404 500 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 VAC14Q08AM6 782 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 EPS8Q12929 822 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 GK3PQ14409 553 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 NFATC4Q14934 902 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 CLCA4Q14CN2 919 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 TEAD4Q15561 434 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 LIN52Q52LA3 116 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 LRRC23Q53EV4 343 aaPredicted RBP21.66■■□□□ 1.06
CCDC47-204ENST00000582252 ZNF385BQ569K4 471 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 RNF220Q5VTB9 566 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 TMEM214Q6NUQ4 689 aaKnown RBP21.66■■□□□ 1.06
CCDC47-204ENST00000582252 LINC01555Q8NAE3 123 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 CYGBQ8WWM9 190 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 WDR92Q96MX6 357 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 PRAP1Q96NZ9 151 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 ASPSCR1Q9BZE9 553 aa21.66■■□□□ 1.06
CCDC47-204ENST00000582252 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.66■■□□□ 1.06
CCDC47-204ENST00000582252 G3V2T6 193 aa21.65■■□□□ 1.06
CCDC47-204ENST00000582252 H0YAE9 185 aa21.65■■□□□ 1.06
CCDC47-204ENST00000582252 UPK1AO00322 258 aa21.65■■□□□ 1.06
CCDC47-204ENST00000582252 LATO43561 262 aa21.65■■□□□ 1.06
CCDC47-204ENST00000582252 APBB3O95704 486 aa21.65■■□□□ 1.06
CCDC47-204ENST00000582252 ALBP02768 609 aa21.65■■□□□ 1.06
CCDC47-204ENST00000582252 IL3P08700 152 aa21.65■■□□□ 1.06
CCDC47-204ENST00000582252 HNRNPA2B1P22626 353 aaKnown RBP21.65■■□□□ 1.06
CCDC47-204ENST00000582252 KDELR2P33947 212 aa21.65■■□□□ 1.06
CCDC47-204ENST00000582252 RPE65Q16518 533 aa21.65■■□□□ 1.06
CCDC47-204ENST00000582252 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.65■■□□□ 1.06
CCDC47-204ENST00000582252 ZNF551Q7Z340 670 aaPredicted RBP21.65■■□□□ 1.06
CCDC47-204ENST00000582252 ADCK2Q7Z695 626 aa21.65■■□□□ 1.06
CCDC47-204ENST00000582252 CLEC4FQ8N1N0 589 aa21.65■■□□□ 1.06
CCDC47-204ENST00000582252 ANKRD53Q8N9V6 530 aa21.65■■□□□ 1.06
CCDC47-204ENST00000582252 RGMAQ96B86 450 aa21.65■■□□□ 1.06
CCDC47-204ENST00000582252 RMND5BQ96G75 393 aaPredicted RBP21.65■■□□□ 1.06
CCDC47-204ENST00000582252 FGF22Q9HCT0 170 aa21.65■■□□□ 1.06
CCDC47-204ENST00000582252 USP36Q9P275 1121 aaKnown RBP21.65■■□□□ 1.06
CCDC47-204ENST00000582252 ADAM29Q9UKF5 820 aa21.65■■□□□ 1.06
CCDC47-204ENST00000582252 BDP1A6H8Y1 2624 aa21.65■■□□□ 1.06
CCDC47-204ENST00000582252 PLPP1O14494 284 aa21.64■■□□□ 1.06
CCDC47-204ENST00000582252 OR1F1O43749 312 aa21.64■■□□□ 1.06
CCDC47-204ENST00000582252 TBX19O60806 448 aa21.64■■□□□ 1.06
CCDC47-204ENST00000582252 CLEC3AO75596 197 aa21.64■■□□□ 1.06
CCDC47-204ENST00000582252 H6PDO95479 791 aa21.64■■□□□ 1.06
CCDC47-204ENST00000582252 ZNF682O95780 498 aa21.64■■□□□ 1.06
CCDC47-204ENST00000582252 TPP2P29144 1249 aaPredicted RBP21.64■■□□□ 1.06
CCDC47-204ENST00000582252 RPL5P46777 297 aaKnown RBP21.64■■□□□ 1.06
CCDC47-204ENST00000582252 MAPK12P53778 367 aa21.64■■□□□ 1.06
CCDC47-204ENST00000582252 CSNK1G2P78368 415 aa21.64■■□□□ 1.06
CCDC47-204ENST00000582252 RGNQ15493 299 aa21.64■■□□□ 1.06
CCDC47-204ENST00000582252 NKG7Q16617 165 aa21.64■■□□□ 1.06
CCDC47-204ENST00000582252 STK32CQ86UX6 486 aa21.64■■□□□ 1.06
CCDC47-204ENST00000582252 NUDT13Q86X67 352 aa21.64■■□□□ 1.06
CCDC47-204ENST00000582252 PTOV1Q86YD1 416 aa21.64■■□□□ 1.06
CCDC47-204ENST00000582252 SPEM1Q8N4L4 309 aa21.64■■□□□ 1.06
CCDC47-204ENST00000582252 FAM47BQ8NA70 645 aa21.64■■□□□ 1.06
CCDC47-204ENST00000582252 OR52E1Q8NGJ3 308 aa21.64■■□□□ 1.06
CCDC47-204ENST00000582252 OR5K1Q8NHB7 308 aa21.64■■□□□ 1.06
CCDC47-204ENST00000582252 KIR3DX1Q9H7L2 352 aa21.64■■□□□ 1.06
CCDC47-204ENST00000582252 PLEKHM1Q9Y4G2 1056 aa21.64■■□□□ 1.06
CCDC47-204ENST00000582252 SMIM31A0A1B0GVY4 71 aa21.63■■□□□ 1.05
CCDC47-204ENST00000582252 TRBC2A0A5B9 178 aa21.63■■□□□ 1.05
CCDC47-204ENST00000582252 NDUFS4O43181 175 aa21.63■■□□□ 1.05
CCDC47-204ENST00000582252 IGLV3-19P01714 112 aa21.63■■□□□ 1.05
CCDC47-204ENST00000582252 EFNA1P20827 205 aaPredicted RBP21.63■■□□□ 1.05
CCDC47-204ENST00000582252 PCGF2P35227 344 aa21.63■■□□□ 1.05
CCDC47-204ENST00000582252 MAGEA2P43356 314 aa21.63■■□□□ 1.05
CCDC47-204ENST00000582252 CYP4F2P78329 520 aa21.63■■□□□ 1.05
CCDC47-204ENST00000582252 ZXDAP98168 799 aa21.63■■□□□ 1.05
CCDC47-204ENST00000582252 MC1RQ01726 317 aa21.63■■□□□ 1.05
CCDC47-204ENST00000582252 FADDQ13158 208 aa21.63■■□□□ 1.05
CCDC47-204ENST00000582252 HEPACAMQ14CZ8 416 aa21.63■■□□□ 1.05
CCDC47-204ENST00000582252 OTUD3Q5T2D3 398 aaPredicted RBP21.63■■□□□ 1.05
CCDC47-204ENST00000582252 ENPP7Q6UWV6 458 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms