RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 SGTAO43765 313 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 PBLDP30039 288 aaPredicted RBP13.15□□□□□ -0.3
RNF43-205ENST00000581868 HLA-FP30511 346 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 ETV3P41162 512 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 HNF4AP41235 474 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 MVDP53602 400 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 CCL23P55773 120 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 ZNF45Q02386 682 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 SF3B4Q15427 424 aaKnown RBP eCLIP13.15□□□□□ -0.34e-6■■■□□ 16.3
RNF43-205ENST00000581868 MLIPQ5VWP3 458 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 CCBE1Q6UXH8 406 aaPredicted RBP13.15□□□□□ -0.3
RNF43-205ENST00000581868 HSD11B1LQ7Z5J1 315 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 DEFB128Q7Z7B8 93 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 SLC43A3Q8NBI5 491 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 CHTF18Q8WVB6 975 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 COQ8BQ96D53 544 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 TXNDC15Q96J42 360 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 IL21Q9HBE4 155 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 MRPL17Q9NRX2 175 aaKnown RBP13.15□□□□□ -0.3
RNF43-205ENST00000581868 UGT2A1Q9Y4X1 527 aa13.15□□□□□ -0.3
RNF43-205ENST00000581868 LAMA3Q16787 3333 aa13.15□□□□□ -0.31
RNF43-205ENST00000581868 HAT1O14929 419 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 TSPAN6O43657 245 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 KIAA0513O60268 411 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 EFEMP2O95967 443 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 ADRA2AP08913 450 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 GSTM1P09488 218 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 GABRB1P18505 474 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 TIA1P31483 386 aaKnown RBP eCLIP13.14□□□□□ -0.311e-7■■■■□ 21.9
RNF43-205ENST00000581868 CA8P35219 290 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 UGT2B15P54855 530 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 C21orf58P58505 322 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 TSTQ16762 297 aaKnown RBP13.14□□□□□ -0.31
RNF43-205ENST00000581868 LRIT3Q3SXY7 679 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 FBXO43Q4G163 708 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 GCNT6Q5T4J0 391 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.14□□□□□ -0.317e-12■■■■□ 23.4
RNF43-205ENST00000581868 GDPD3Q7L5L3 318 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 TMPRSS11BQ86T26 416 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 METTL3Q86U44 580 aaKnown RBP13.14□□□□□ -0.31
RNF43-205ENST00000581868 FAM217AQ8IXS0 508 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 DENND6BQ8NEG7 585 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 ATL1Q8WXF7 558 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 TMEM159Q96B96 161 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 FAM129BQ96TA1 746 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 NXF2Q9GZY0 626 aaKnown RBP13.14□□□□□ -0.31
RNF43-205ENST00000581868 C14orf119Q9NWQ9 140 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 ZNF232Q9UNY5 417 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 PPIL1Q9Y3C6 166 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 PCDHGB6Q9Y5F9 930 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 CFAP20Q9Y6A4 193 aaKnown RBP13.14□□□□□ -0.31
RNF43-205ENST00000581868 THSD7BQ9C0I4 1608 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 CTDSP2O14595 271 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 POP4O95707 220 aaKnown RBP13.14□□□□□ -0.31
RNF43-205ENST00000581868 ZNF8P17098 575 aaPredicted RBP13.14□□□□□ -0.31
RNF43-205ENST00000581868 PRKCDQ05655 676 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 KCNC3Q14003 757 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 PTGES3Q15185 160 aaKnown RBP13.14□□□□□ -0.31
RNF43-205ENST00000581868 BCL2A1Q16548 175 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 FAM180BQ6P0A1 224 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 RNF130Q86XS8 419 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 RAVER1Q8IY67 606 aaKnown RBP13.14□□□□□ -0.31
RNF43-205ENST00000581868 CELF2-AS1Q8N7Q2 184 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 CAPSLQ8WWF8 208 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 NEIL2Q969S2 332 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 EFHD2Q96C19 240 aaPredicted RBP13.14□□□□□ -0.31
RNF43-205ENST00000581868 PKP4Q99569 1192 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 TSEN34Q9BSV6 310 aaKnown RBP13.14□□□□□ -0.31
RNF43-205ENST00000581868 RIOK2Q9BVS4 552 aaKnown RBP13.14□□□□□ -0.31
RNF43-205ENST00000581868 NUAK2Q9H093 628 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 EHD1Q9H4M9 534 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 BRF2Q9HAW0 419 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 EHD3Q9NZN3 535 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 RAB23Q9ULC3 237 aa13.14□□□□□ -0.31
RNF43-205ENST00000581868 PDE4DIPQ5VU43 2346 aa13.13□□□□□ -0.31
RNF43-205ENST00000581868 PRAMEF33A0A0G2JMD5 474 aa13.13□□□□□ -0.31
RNF43-205ENST00000581868 RNASET2O00584 256 aaKnown RBP13.13□□□□□ -0.31
RNF43-205ENST00000581868 ZW10O43264 779 aa13.13□□□□□ -0.31
RNF43-205ENST00000581868 SSX4O60224 188 aa13.13□□□□□ -0.31
RNF43-205ENST00000581868 PRAMEF10O60809 474 aa13.13□□□□□ -0.31
RNF43-205ENST00000581868 TNFRSF21O75509 655 aa13.13□□□□□ -0.31
RNF43-205ENST00000581868 SLCO2B1O94956 709 aa13.13□□□□□ -0.31
RNF43-205ENST00000581868 PTTG1O95997 202 aa13.13□□□□□ -0.31
RNF43-205ENST00000581868 TGFB1P01137 390 aa13.13□□□□□ -0.31
RNF43-205ENST00000581868 SOD2P04179 222 aa13.13□□□□□ -0.31
RNF43-205ENST00000581868 IMPA1P29218 277 aa13.13□□□□□ -0.31
RNF43-205ENST00000581868 SOAT1P35610 550 aa13.13□□□□□ -0.31
RNF43-205ENST00000581868 CHI3L1P36222 383 aaPredicted RBP13.13□□□□□ -0.31
RNF43-205ENST00000581868 CTSCP53634 463 aa13.13□□□□□ -0.31
RNF43-205ENST00000581868 POM121L1PQ3SYA9 428 aa13.13□□□□□ -0.31
RNF43-205ENST00000581868 SPIN4Q56A73 249 aa13.13□□□□□ -0.31
RNF43-205ENST00000581868 SPANXN2Q5MJ10 180 aa13.13□□□□□ -0.31
RNF43-205ENST00000581868 DEPDC1Q5TB30 811 aa13.13□□□□□ -0.31
RNF43-205ENST00000581868 ZDHHC20Q5W0Z9 365 aa13.13□□□□□ -0.31
RNF43-205ENST00000581868 GAREM2Q75VX8 874 aa13.13□□□□□ -0.31
RNF43-205ENST00000581868 RAD9AQ99638 391 aa13.13□□□□□ -0.31
RNF43-205ENST00000581868 ERVK13-1Q9NX77 482 aa13.13□□□□□ -0.31
RNF43-205ENST00000581868 CCDC59Q9P031 241 aaKnown RBP13.13□□□□□ -0.31
RNF43-205ENST00000581868 PEX16Q9Y5Y5 336 aa13.13□□□□□ -0.31
RNF43-205ENST00000581868 NRG2O14511 850 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms