RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 H7BY64 318 aa12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 TERTO14746 1132 aaKnown RBP12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 SRPX2O60687 465 aaPredicted RBP12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 LBPP18428 481 aa12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 CXCR2P25025 360 aa12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 GDF5P43026 501 aa12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 AGTR2P50052 363 aa12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 CDH13P55290 713 aa12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 CSNK1G2P78368 415 aa12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 KLF10Q13118 480 aa12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 MAD2L1Q13257 205 aaPredicted RBP12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 UBAP2LQ14157 1087 aaKnown RBP12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 SPRED3Q2MJR0 410 aa12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 C18orf21Q32NC0 220 aaPredicted RBP12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 VWA5B1Q5TIE3 1220 aa12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 NXPE4Q6UWF7 544 aa12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 CCDC81Q6ZN84 652 aa12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 SPATA19Q7Z5L4 167 aa12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 TMPRSS11BQ86T26 416 aa12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 MCATQ8IVS2 390 aaKnown RBP12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 PARP9Q8IXQ6 854 aa12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 RERGQ96A58 199 aaPredicted RBP12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 ZNF501Q96CX3 271 aaPredicted RBP12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 PRAP1Q96NZ9 151 aa12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 OR52B2Q96RD2 323 aa12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 SLC29A3Q9BZD2 475 aa12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 PITHD1Q9GZP4 211 aaPredicted RBP12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 EHD1Q9H4M9 534 aa12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 FAM60AQ9NP50 221 aa12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 TMEM45AQ9NWC5 275 aa12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 IRAK4Q9NWZ3 460 aa12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 AP1M2Q9Y6Q5 423 aa12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 SPTA1P02549 2419 aa12.87□□□□□ -0.35
CSNK1D-220ENST00000581737 TRBC2A0A5B9 178 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 E7EQ34 232 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 E2F3O00716 465 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 TXNDC9O14530 226 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 PRAMEF10O60809 474 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 CTSVO60911 334 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 OR2B3O76000 313 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 WFS1O76024 890 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 T-ENOLP0DO92 83 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 COX4I1P13073 169 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 CCR10P46092 362 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 GABRA4P48169 554 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 YBX1P67809 324 aaKnown RBP12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 STX5Q13190 355 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 RIPK1Q13546 671 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 LAPTM5Q13571 262 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 CYLC2Q14093 348 aaPredicted RBP12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 RPS6KA2Q15349 733 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 TGIF1Q15583 401 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 GSTA3Q16772 222 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 DEFB110Q30KQ9 67 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 PAGE2BQ5JRK9 111 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 ATG9BQ674R7 924 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 TLDC1Q6P9B6 456 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 RNF165Q6ZSG1 346 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 GOLGA7Q7Z5G4 137 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 MILR1Q7Z6M3 343 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 TMEM126BQ8IUX1 230 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 FAM9CQ8IZT9 166 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 KRT78Q8N1N4 520 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 ZNF655Q8N720 491 aaPredicted RBP12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 OR4K1Q8NGD4 311 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 ESAMQ96AP7 390 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 SERPINI1Q99574 410 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 CTRCQ99895 268 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 EFCAB11Q9BUY7 163 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 NLNQ9BYT8 704 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 WDR55Q9H6Y2 383 aaPredicted RBP12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 APMAPQ9HDC9 416 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 TRPS1Q9UHF7 1281 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 BCAP29Q9UHQ4 241 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 PILRAQ9UKJ1 303 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 ACSL6Q9UKU0 697 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 SRPK3Q9UPE1 567 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 SH2B3Q9UQQ2 575 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 B3GALT1Q9Y5Z6 326 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 SPTBP11277 2137 aa12.86□□□□□ -0.35
CSNK1D-220ENST00000581737 KCNE1BA0A087WTH5 132 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 A0A0J9YVX5 310 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 BBIP1A8MTZ0 92 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 TMEM233B4DJY2 109 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 C9orf172C9J069 976 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 HAT1O14929 419 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 ZSCAN9O15535 394 aaPredicted RBP12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 SCRG1O75711 98 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 KRT6AP02538 564 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 KRT6BP04259 564 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 HBQ1P09105 142 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 C1GALT1C1LP0DN25 315 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 IDO1P14902 403 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 PIK3R1P27986 724 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 GSTM2P28161 218 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 SLC5A2P31639 672 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 PGM1P36871 562 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 KRT6CP48668 564 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 REEP5Q00765 189 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 IRF8Q02556 426 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms