RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 MMP24Q9Y5R2 645 aa3.74□□□□□ -1.81
SMCHD1-204ENST00000581226 ILVBLA1L0T0 632 aa3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 TCP10L2B9ZVM9 353 aa3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 RNF103O00237 685 aa3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 CTDSPLO15194 276 aa3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 MLNRO43193 412 aa3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 ACSL4O60488 711 aa3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 SNAP91O60641 907 aa3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 SLU7O95391 586 aaKnown RBP3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 HPRP00739 348 aa3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 GATA1P15976 413 aaPredicted RBP3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 ZNF10P21506 573 aaPredicted RBP3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 EDNRAP25101 427 aa3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 FEN1P39748 380 aaKnown RBP3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 OR3A1P47881 315 aa3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 NDST2P52849 883 aa3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 LMO4P61968 165 aa3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 KIAA0141Q14154 515 aaPredicted RBP3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 ZRANB3Q5FWF4 1079 aa3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 ARMCX4Q5H9R4 360 aa3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 TCEAL6Q6IPX3 200 aa3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 TICAM2Q86XR7 235 aa3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 DND1Q8IYX4 353 aaKnown RBP3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 OR8H3Q8N146 312 aa3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 Q8N377 158 aa3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 KIAA0895Q8NCT3 520 aa3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 OR5M9Q8NGP3 310 aa3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 NPRL2Q8WTW4 380 aa3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 PRMT1Q99873 361 aaKnown RBP3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 ARMCX3Q9UH62 379 aaPredicted RBP3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 GTF3C4Q9UKN8 822 aa3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 HBS1LQ9Y450 684 aaKnown RBP3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 ZHX2Q9Y6X8 837 aa3.73□□□□□ -1.81
SMCHD1-204ENST00000581226 IGHV3-20A0A0C4DH32 117 aa3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 IGHV3-38A0A0C4DH36 116 aa3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 ZNF732B4DXR9 585 aa3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 TRAFD1O14545 582 aaPredicted RBP3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 SLC30A4O14863 429 aa3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 SIGLEC5O15389 551 aa3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 SCO2O43819 266 aa3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 IGHV3-13P01766 116 aa3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 KRT3P12035 628 aa3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 CCND3P30281 292 aaPredicted RBP3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 PKLRP30613 574 aa3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 SLC1A3P43003 542 aa3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 DSCR10P59022 87 aa3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 RPP38P78345 283 aaKnown RBP3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 ZNF146Q15072 292 aa3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 MAPK11Q15759 364 aa3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 SLC27A4Q6P1M0 643 aa3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 CDHR3Q6ZTQ4 885 aa3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 TDHQ8IZJ6 230 aa3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 LYG1Q8N1E2 194 aa3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 ABHD12Q8N2K0 398 aa3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 UBLCP1Q8WVY7 318 aaPredicted RBP3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 PDLIM5Q96HC4 596 aaKnown RBP3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 ADPGKQ9BRR6 497 aa3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 ATG101Q9BSB4 218 aa3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 GRPEL1Q9HAV7 217 aa3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 VPS18Q9P253 973 aa3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 CTSZQ9UBR2 303 aa3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 ZNF510Q9Y2H8 683 aa3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 MRPS18CQ9Y3D5 142 aaKnown RBP3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 COL2A1P02458 1487 aaPredicted RBP3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 COL5A2P05997 1499 aaPredicted RBP3.72□□□□□ -1.81
SMCHD1-204ENST00000581226 IGLV4-3A0A075B6K6 122 aa3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 C2orf92A0A1B0GVN3 265 aa3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 A0A1W2PPR1 153 aa3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 TNFSF12O43508 249 aa3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 HSP90AB1P08238 724 aaKnown RBP3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 SELEP16581 610 aa3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 CAPN2P17655 700 aa3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 FKBP3Q00688 224 aaKnown RBP3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 CD300CQ08708 224 aa3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 SCARB2Q14108 478 aa3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 NHSL2Q5HYW2 709 aa3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 C17orf107Q6ZR85 190 aa3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 Q6ZVQ6 151 aa3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 Q71RC1 249 aaPredicted RBP3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 LMNTD2Q8IXW0 634 aa3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 SMYD1Q8NB12 490 aa3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 OR2L2Q8NH16 312 aa3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 GOT1L1Q8NHS2 421 aaPredicted RBP3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 AFAP1L1Q8TED9 768 aa3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 CKAP2Q8WWK9 683 aa3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 CHCHD5Q9BSY4 110 aa3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 TRIM6Q9C030 488 aaPredicted RBP3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 MTIF3Q9H2K0 278 aaKnown RBP3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 TUBB1Q9H4B7 451 aa3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 ZWILCHQ9H900 591 aa3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 MRGBPQ9NV56 204 aa3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 SLCO1C1Q9NYB5 712 aa3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 SEPT10Q9P0V9 454 aa3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 DNAJB9Q9UBS3 223 aa3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 CDH7Q9ULB5 785 aa3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 GPR132Q9UNW8 380 aa3.71□□□□□ -1.82
SMCHD1-204ENST00000581226 PFASO15067 1338 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 OOEPA6NGQ2 149 aa3.7□□□□□ -1.82
SMCHD1-204ENST00000581226 ANKDD1BA6NHY2 528 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms