RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 H7BY64 318 aa12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 TXNDC9O14530 226 aa12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 ZNF354AO60765 605 aaPredicted RBP12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 ADAM11O75078 769 aa12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 ERN1O75460 977 aaKnown RBP12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 PROSCO94903 275 aa12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 KRT1P04264 644 aa12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 CYP1A2P05177 515 aa12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 TNNT1P13805 278 aa12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 PSMB4P28070 264 aa12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 LOXP28300 417 aaPredicted RBP12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 OPRM1P35372 400 aa12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 GEMP55040 296 aa12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 OCRLQ01968 901 aa12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 FAM27E3Q08E93 113 aa12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 KLHL30Q0D2K2 578 aa12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 ITIH4Q14624 930 aa12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 RAB42Q8N4Z0 105 aa12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 ZNF441Q8N8Z8 693 aa12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 NEIL3Q8TAT5 605 aa12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 ASZ1Q8WWH4 475 aa12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 HSPBAP1Q96EW2 488 aa12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 PRAP1Q96NZ9 151 aa12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 SHARPINQ9H0F6 387 aa12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 RHBGQ9H310 441 aa12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 CXorf56Q9H5V9 222 aa12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 ZNF703Q9H7S9 590 aaPredicted RBP12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 NDRG3Q9UGV2 375 aa12.93□□□□□ -0.34
CSNK1D-213ENST00000580446 CHST10O43529 356 aa12.92□□□□□ -0.34
CSNK1D-213ENST00000580446 PHF2O75151 1096 aa12.92□□□□□ -0.34
CSNK1D-213ENST00000580446 PLAUP00749 431 aa12.92□□□□□ -0.34
CSNK1D-213ENST00000580446 APOA4P06727 396 aa12.92□□□□□ -0.34
CSNK1D-213ENST00000580446 TMIGD3P0DMS9 266 aaPredicted RBP12.92□□□□□ -0.34
CSNK1D-213ENST00000580446 PAX1P15863 534 aa12.92□□□□□ -0.34
CSNK1D-213ENST00000580446 MSNP26038 577 aaKnown RBP12.92□□□□□ -0.34
CSNK1D-213ENST00000580446 FOXN2P32314 431 aa12.92□□□□□ -0.34
CSNK1D-213ENST00000580446 COILP38432 576 aaPredicted RBP12.92□□□□□ -0.34
CSNK1D-213ENST00000580446 SEMA3AQ14563 771 aa12.92□□□□□ -0.34
CSNK1D-213ENST00000580446 POU6F1Q14863 301 aa12.92□□□□□ -0.34
CSNK1D-213ENST00000580446 BTLAQ7Z6A9 289 aa12.92□□□□□ -0.34
CSNK1D-213ENST00000580446 PCGF5Q86SE9 256 aa12.92□□□□□ -0.34
CSNK1D-213ENST00000580446 LDB1Q86U70 411 aaPredicted RBP12.92□□□□□ -0.34
CSNK1D-213ENST00000580446 LIX1Q8N485 282 aa12.92□□□□□ -0.34
CSNK1D-213ENST00000580446 B3GNT7Q8NFL0 401 aa12.92□□□□□ -0.34
CSNK1D-213ENST00000580446 SLC44A1Q8WWI5 657 aa12.92□□□□□ -0.34
CSNK1D-213ENST00000580446 ANKRD9Q96BM1 317 aaPredicted RBP12.92□□□□□ -0.34
CSNK1D-213ENST00000580446 TBC1D20Q96BZ9 403 aa12.92□□□□□ -0.34
CSNK1D-213ENST00000580446 JSRP1Q96MG2 331 aaPredicted RBP12.92□□□□□ -0.34
CSNK1D-213ENST00000580446 RASL10BQ96S79 203 aa12.92□□□□□ -0.34
CSNK1D-213ENST00000580446 AARSD1Q9BTE6 412 aaKnown RBP12.92□□□□□ -0.34
CSNK1D-213ENST00000580446 GBA3Q9H227 469 aa12.92□□□□□ -0.34
CSNK1D-213ENST00000580446 PNO1Q9NRX1 252 aaKnown RBP12.92□□□□□ -0.34
CSNK1D-213ENST00000580446 YARS2Q9Y2Z4 477 aaKnown RBP12.92□□□□□ -0.34
CSNK1D-213ENST00000580446 ATG4BQ9Y4P1 393 aa12.92□□□□□ -0.34
CSNK1D-213ENST00000580446 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.92□□□□□ -0.34
CSNK1D-213ENST00000580446 ARHGAP21Q5T5U3 1957 aa12.92□□□□□ -0.34
CSNK1D-213ENST00000580446 SCN3AQ9NY46 2000 aa12.91□□□□□ -0.34
CSNK1D-213ENST00000580446 PKMP14618 531 aaKnown RBP12.91□□□□□ -0.34
CSNK1D-213ENST00000580446 SRD5A1P18405 259 aa12.91□□□□□ -0.34
CSNK1D-213ENST00000580446 AOAHP28039 575 aa12.91□□□□□ -0.34
CSNK1D-213ENST00000580446 CRYZQ08257 329 aaKnown RBP12.91□□□□□ -0.34
CSNK1D-213ENST00000580446 DUSP8Q13202 625 aa12.91□□□□□ -0.34
CSNK1D-213ENST00000580446 NAA25Q14CX7 972 aa12.91□□□□□ -0.34
CSNK1D-213ENST00000580446 DCST1Q5T197 706 aa12.91□□□□□ -0.34
CSNK1D-213ENST00000580446 PRAMEF20Q5VT98 475 aa12.91□□□□□ -0.34
CSNK1D-213ENST00000580446 NSUN5P2Q63ZY6 315 aa12.91□□□□□ -0.34
CSNK1D-213ENST00000580446 RTL4Q6ZR62 310 aa12.91□□□□□ -0.34
CSNK1D-213ENST00000580446 C22orf34Q6ZV56 151 aa12.91□□□□□ -0.34
CSNK1D-213ENST00000580446 GCNT2Q8N0V5 402 aa12.91□□□□□ -0.34
CSNK1D-213ENST00000580446 SMPDL3AQ92484 453 aa12.91□□□□□ -0.34
CSNK1D-213ENST00000580446 OR1F2PQ96R84 312 aa12.91□□□□□ -0.34
CSNK1D-213ENST00000580446 TIMP4Q99727 224 aa12.91□□□□□ -0.34
CSNK1D-213ENST00000580446 TBL1YQ9BQ87 522 aa12.91□□□□□ -0.34
CSNK1D-213ENST00000580446 MED18Q9BUE0 208 aa12.91□□□□□ -0.34
CSNK1D-213ENST00000580446 HOMER3Q9NSC5 361 aa12.91□□□□□ -0.34
CSNK1D-213ENST00000580446 SACM1LQ9NTJ5 587 aa12.91□□□□□ -0.34
CSNK1D-213ENST00000580446 LAMP3Q9UQV4 416 aa12.91□□□□□ -0.34
CSNK1D-213ENST00000580446 SLC6A5Q9Y345 797 aa12.91□□□□□ -0.34
CSNK1D-213ENST00000580446 MYOCOSA0A1B0GUC4 107 aa12.9□□□□□ -0.34
CSNK1D-213ENST00000580446 TCRBV16S1A1N1A0A5B0 115 aa12.9□□□□□ -0.34
CSNK1D-213ENST00000580446 LRRC3CA6NJW4 275 aa12.9□□□□□ -0.34
CSNK1D-213ENST00000580446 AHRRA9YTQ3 701 aa12.9□□□□□ -0.34
CSNK1D-213ENST00000580446 H7C0S8 307 aa12.9□□□□□ -0.34
CSNK1D-213ENST00000580446 NDUFS7O75251 213 aa12.9□□□□□ -0.34
CSNK1D-213ENST00000580446 ZNF16P17020 682 aaPredicted RBP12.9□□□□□ -0.34
CSNK1D-213ENST00000580446 CRYGSP22914 178 aa12.9□□□□□ -0.34
CSNK1D-213ENST00000580446 CDKN1AP38936 164 aa12.9□□□□□ -0.34
CSNK1D-213ENST00000580446 SLCO1A2P46721 670 aa12.9□□□□□ -0.34
CSNK1D-213ENST00000580446 PRDX1Q06830 199 aaKnown RBP12.9□□□□□ -0.34
CSNK1D-213ENST00000580446 DEFB134Q4QY38 66 aa12.9□□□□□ -0.34
CSNK1D-213ENST00000580446 MFSD7Q6UXD7 560 aa12.9□□□□□ -0.34
CSNK1D-213ENST00000580446 OTOAQ7RTW8 1153 aa12.9□□□□□ -0.34
CSNK1D-213ENST00000580446 SLC26A11Q86WA9 606 aa12.9□□□□□ -0.34
CSNK1D-213ENST00000580446 FAM136AQ96C01 138 aa12.9□□□□□ -0.34
CSNK1D-213ENST00000580446 MARK4Q96L34 752 aa12.9□□□□□ -0.34
CSNK1D-213ENST00000580446 ERGIC2Q96RQ1 377 aa12.9□□□□□ -0.34
CSNK1D-213ENST00000580446 SLC30A3Q99726 388 aa12.9□□□□□ -0.34
CSNK1D-213ENST00000580446 L2HGDHQ9H9P8 463 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms