RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 LRRC70Q7Z2Q7 622 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 GOLGA7Q7Z5G4 137 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 THOC6Q86W42 341 aaKnown RBP3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 ZNF575Q86XF7 245 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 PLD3Q8IV08 490 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 SRRM1Q8IYB3 904 aaKnown RBP3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 LAS2Q8IYD9 372 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 SYTL1Q8IYJ3 562 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 OR4N4Q8N0Y3 316 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 CNPY4Q8N129 248 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 TCAIMQ8N3R3 496 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 AFAP1L2Q8N4X5 818 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 PTGR2Q8N8N7 351 aaPredicted RBP3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 ANKS4BQ8N8V4 417 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 L3MBTL4Q8NA19 623 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 OR52B6Q8NGF0 335 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 WDR36Q8NI36 951 aaKnown RBP3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 WDR20Q8TBZ3 569 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 MAGEC3Q8TD91 643 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 MCOLN3Q8TDD5 553 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 TCP10LQ8TDR4 215 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 CREB3L4Q8TEY5 395 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 SKA2Q8WVK7 121 aaPredicted RBP3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 SLC5A11Q8WWX8 675 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 ZUFSPQ96AP4 578 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 ZBTB9Q96C00 473 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 C11orf24Q96F05 449 aaPredicted RBP3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 ZDHHC12Q96GR4 267 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 SMIM10Q96HG1 83 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 FOPNLQ96NB1 174 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 SLC46A1Q96NT5 459 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 MRPL57Q9BQC6 102 aaKnown RBP3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 DDA1Q9BW61 102 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 ACAT2Q9BWD1 397 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 ZNF717Q9BY31 904 aaPredicted RBP3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 C20orf27Q9GZN8 174 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 EHD1Q9H4M9 534 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 NT5DC2Q9H857 520 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 AKIRIN1Q9H9L7 192 aaPredicted RBP3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 POLR1BQ9H9Y6 1135 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 PELI2Q9HAT8 420 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 LHX9Q9NQ69 397 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 ACSS2Q9NR19 701 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 FGF21Q9NSA1 209 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 GEMIN8Q9NWZ8 242 aaKnown RBP3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 GPRC5BQ9NZH0 403 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 CPSF2Q9P2I0 782 aaKnown RBP3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 KLHL3Q9UH77 587 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 SLC22A14Q9Y267 594 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 PLLPQ9Y342 182 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 TSC22D4Q9Y3Q8 395 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 LOXL2Q9Y4K0 774 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 CCL27Q9Y4X3 112 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 CLDN16Q9Y5I7 305 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 B3GALT1Q9Y5Z6 326 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 FREM3P0C091 2139 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 ATRXP46100 2492 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 TLN1Q9Y490 2541 aaKnown RBP3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 IGLV3-12A0A075B6K2 115 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 UQCRHLA0A096LP55 91 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 TRBC2A0A5B9 178 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 TLDC2A0PJX2 215 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 FEZF1A0PJY2 475 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 ZNF839A8K0R7 811 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 EFCAB7A8K855 629 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 SYCE1LA8MT33 242 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 SUPT3HB4E1H0 165 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 NPIPB8E9PQR5 432 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 H0YGG7 62 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 H3BQF6 201 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 TMX2-CTNND1H3BSU7 103 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 H7BY64 318 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 FFAR3O14843 346 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 NVLO15381 856 aaKnown RBP3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 FOXS1O43638 330 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 DNAJB6O75190 326 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 ERLIN1O75477 346 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 SUPT3HO75486 399 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 STK16O75716 305 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 WDR47O94967 919 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 SCELO95171 688 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 ETHE1O95571 254 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 MT-ND3P03897 115 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 BPGMP07738 259 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 UQCRHP07919 91 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 RBP1P09455 135 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 C1GALT1C1LP0DN25 315 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 JUPP14923 745 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 EZRP15311 586 aaKnown RBP3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 KRT15P19012 456 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 IMPDH1P20839 514 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 CDH3P22223 829 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 F8A1P23610 371 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 ATP5F1P24539 256 aaPredicted RBP3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 EEF1DP29692 281 aaKnown RBP3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 CMPK1P30085 196 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 ALDH3A1P30838 453 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 SLC5A2P31639 672 aa3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 HNRNPH1P31943 449 aaKnown RBP3.6□□□□□ -1.83
SMARCE1-215ENST00000578995 HTR6P50406 440 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms