RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 ABI3BPQ7Z7G0 1075 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 HIPK1Q86Z02 1210 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 ZDHHC13Q8IUH4 622 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 GJD3Q8N144 294 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 ZNF655Q8N720 491 aaPredicted RBP10.64□□□□□ -0.71
SKA2-204ENST00000578519 MFSD9Q8NBP5 474 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 OR52N2Q8NGI0 321 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 OR2A1Q8NGT9 310 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 WDR48Q8TAF3 677 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 FBXO30Q8TB52 745 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.64□□□□□ -0.714e-17■■■■■ 47.6
SKA2-204ENST00000578519 LZICQ8WZA0 190 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 MIEF2Q96C03 454 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 ZBED6CLQ96FA7 236 aaPredicted RBP10.64□□□□□ -0.71
SKA2-204ENST00000578519 VPS50Q96JG6 964 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 LMAN1LQ9HAT1 526 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 NEUROD4Q9HD90 331 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 GIMAP4Q9NUV9 329 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 POT1Q9NUX5 634 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 TAS2R9Q9NYW1 312 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 EHD3Q9NZN3 535 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 DLGAP2Q9P1A6 1054 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 PSME2Q9UL46 239 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 FAF1Q9UNN5 650 aaPredicted RBP10.64□□□□□ -0.71
SKA2-204ENST00000578519 TICRRQ7Z2Z1 1910 aa10.64□□□□□ -0.71
SKA2-204ENST00000578519 PRRC2BQ5JSZ5 2229 aaKnown RBP10.64□□□□□ -0.71
SKA2-204ENST00000578519 LRRK1Q38SD2 2015 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 TRPM6Q9BX84 2022 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 SAC3D1A6NKF1 404 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 SAP18O00422 153 aaKnown RBP10.63□□□□□ -0.71
SKA2-204ENST00000578519 PDPK1O15530 556 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 PRICKLE3O43900 615 aaPredicted RBP10.63□□□□□ -0.71
SKA2-204ENST00000578519 SH3BP5O60239 455 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 HPRP00739 348 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 SERPINA1P01009 418 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 IL3P08700 152 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 CHRM5P08912 532 aaPredicted RBP10.63□□□□□ -0.71
SKA2-204ENST00000578519 PTPN6P29350 595 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 KDELR2P33947 212 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 BSGP35613 385 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 GZMMP51124 257 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 MANFP55145 182 aaKnown RBP10.63□□□□□ -0.71
SKA2-204ENST00000578519 RELAQ04206 551 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 PLCL1Q15111 1095 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 NRF1Q16656 503 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 ZNF630Q2M218 657 aaPredicted RBP10.63□□□□□ -0.71
SKA2-204ENST00000578519 LEXMQ3ZCV2 418 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 GTDC1Q4AE62 458 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.63□□□□□ -0.71
SKA2-204ENST00000578519 GCNT6Q5T4J0 391 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 HMBOX1Q6NT76 420 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 ARMC6Q6NXE6 501 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 BHLHB9Q6PI77 547 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 EIF3MQ7L2H7 374 aaKnown RBP10.63□□□□□ -0.71
SKA2-204ENST00000578519 SAMD14Q8IZD0 417 aaPredicted RBP10.63□□□□□ -0.71
SKA2-204ENST00000578519 ZCCHC7Q8N3Z6 543 aaKnown RBP10.63□□□□□ -0.71
SKA2-204ENST00000578519 DHRSXQ8N5I4 330 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 FAM47BQ8NA70 645 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 LINC01555Q8NAE3 123 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 TMEM145Q8NBT3 493 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 ZNF740Q8NDX6 193 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 OR2L3Q8NG85 312 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 OR5K1Q8NHB7 308 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 ZFP90Q8TF47 636 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 TSACCQ96A04 125 aaPredicted RBP10.63□□□□□ -0.71
SKA2-204ENST00000578519 KLHDC7BQ96G42 594 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 TOE1Q96GM8 510 aaKnown RBP10.63□□□□□ -0.71
SKA2-204ENST00000578519 KCNC2Q96PR1 638 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 F2RL3Q96RI0 385 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 SLC35A5Q9BS91 424 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 DPH7Q9BTV6 452 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 YTHDF1Q9BYJ9 559 aaKnown RBP10.63□□□□□ -0.71
SKA2-204ENST00000578519 TRIM8Q9BZR9 551 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 FAM192AQ9GZU8 254 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 PRO3102Q9H379 93 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 XKR8Q9H6D3 395 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 DDX31Q9H8H2 851 aaKnown RBP10.63□□□□□ -0.71
SKA2-204ENST00000578519 ACSS1Q9NUB1 689 aaPredicted RBP10.63□□□□□ -0.71
SKA2-204ENST00000578519 CUEDC1Q9NWM3 386 aaPredicted RBP10.63□□□□□ -0.71
SKA2-204ENST00000578519 LYARQ9NX58 379 aaKnown RBP10.63□□□□□ -0.71
SKA2-204ENST00000578519 WSB2Q9NYS7 404 aaPredicted RBP10.63□□□□□ -0.71
SKA2-204ENST00000578519 IFT80Q9P2H3 777 aaPredicted RBP10.63□□□□□ -0.71
SKA2-204ENST00000578519 GMPR2Q9P2T1 348 aaKnown RBP10.63□□□□□ -0.71
SKA2-204ENST00000578519 DUSP12Q9UNI6 340 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 SH2B3Q9UQQ2 575 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 PLEKHM1Q9Y4G2 1056 aa10.63□□□□□ -0.71
SKA2-204ENST00000578519 OR52A4PA6NMU1 304 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 PLPP1O14494 284 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 PRKD3O94806 890 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 KCNK5O95279 499 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 ALBP02768 609 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 ASGR2P07307 311 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 UBTFL6P0CB48 400 aaPredicted RBP10.62□□□□□ -0.71
SKA2-204ENST00000578519 CHRNB1P11230 501 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 ITGA2P17301 1181 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 CDH2P19022 906 aaPredicted RBP10.62□□□□□ -0.71
SKA2-204ENST00000578519 TPP2P29144 1249 aaPredicted RBP10.62□□□□□ -0.71
SKA2-204ENST00000578519 NTSP30990 170 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 PCGF2P35227 344 aa10.62□□□□□ -0.71
SKA2-204ENST00000578519 SOX11P35716 441 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms