RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	NAV3	Q8IVL0	2385 aa		4.16	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TRGV8	A0A0C4DH27	118 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	DYTN	A2CJ06	578 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CTAGE9	A4FU28	777 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	LRIT2	A6NDA9	550 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NPEPPSL1	A6NEC2	478 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	LRRC14B	A6NHZ5	514 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SAGE2P	A6NJ88	616 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329		A8MUA0	341 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329		B4DXG7	233 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329		E5RI56	91 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NPIPA5	E9PKD4	350 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PGRMC1	O00264	195 aa	Known RBP	4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CCL21	O00585	134 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SLC16A5	O15375	505 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NDUFS4	O43181	175 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	HNRNPR	O43390	633 aa	Known RBP	4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ASNA1	O43681	348 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	OR1F1	O43749	312 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ZBTB14	O43829	449 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	KDM1A	O60341	852 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	B4GALT2	O60909	372 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	VPS26A	O75436	327 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	FAM155B	O75949	473 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TOX	O94900	526 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SEC31A	O94979	1220 aa	Known RBP	4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	RASAL1	O95294	804 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NADK	O95544	446 aa	Predicted RBP	4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	GUCA1C	O95843	209 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	GAS8	O95995	478 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PTMA	P06454	111 aa	Known RBP	4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	C8G	P07360	202 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	FH	P07954	510 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CYC1	P08574	325 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CELA3A	P09093	270 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CTAGE8	P0CG41	777 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MTHFD2	P13995	350 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ENDOU	P21128	410 aa	Known RBP	4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	HTR1E	P28566	365 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PPARG	P37231	505 aa	Predicted RBP	4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	HNF4A	P41235	474 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	RPL21	P46778	160 aa	Known RBP	4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	FNTA	P49354	379 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ITGA8	P53708	1063 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	DLX5	P56178	289 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	GPX6	P59796	221 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	FOXO1	Q12778	655 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SP140	Q13342	867 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PWP1	Q13610	501 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	FRG1	Q14331	258 aa	Known RBP	4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TSN	Q15631	228 aa	Known RBP	4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NSDHL	Q15738	373 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	BBS9	Q3SYG4	887 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MINDY4	Q4G0A6	757 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SPANXN3	Q5MJ09	141 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	DUPD1	Q68J44	220 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CASC4	Q6P4E1	433 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TTC23L	Q6PF05	361 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	POMZP3	Q6PJE2	187 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NXPE4	Q6UWF7	544 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SEM1	Q6ZVN7	128 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ADCK2	Q7Z695	626 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	THOC6	Q86W42	341 aa	Known RBP	4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	C17orf64	Q86WR6	236 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	RPS19BP1	Q86WX3	136 aa	Known RBP	4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SPPL2C	Q8IUH8	684 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ANKMY2	Q8IV38	441 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	LIX1L	Q8IVB5	337 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SULF2	Q8IWU5	870 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CTAGE4	Q8IX94	777 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	LMNTD2	Q8IXW0	634 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SLC34A3	Q8N130	599 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ZNF808	Q8N4W9	903 aa	Predicted RBP	4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	OTUD6B	Q8N6M0	293 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	OR52N2	Q8NGI0	321 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	DNAJB8	Q8NHS0	232 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	C16orf52	Q8NHV5	167 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MAGEC3	Q8TD91	643 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PTPMT1	Q8WUK0	201 aa	Predicted RBP	4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SREK1	Q8WXA9	508 aa	Known RBP	4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NRGN	Q92686	78 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ANKRD9	Q96BM1	317 aa	Predicted RBP	4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TBC1D20	Q96BZ9	403 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	RHBDF1	Q96CC6	855 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	LRRC45	Q96CN5	670 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MS4A6E	Q96DS6	147 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	THAP11	Q96EK4	314 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	WDR34	Q96EX3	536 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PBK	Q96KB5	322 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	UBXN10	Q96LJ8	280 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MAGEB10	Q96LZ2	347 aa	Predicted RBP	4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	FOPNL	Q96NB1	174 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	OR1F2P	Q96R84	312 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ANP32E	Q9BTT0	268 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	YIPF2	Q9BWQ6	316 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CDCP1	Q9H5V8	836 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CAB39L	Q9H9S4	337 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SH2D2A	Q9NP31	389 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	UTP6	Q9NYH9	597 aa	Known RBP	4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms