RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 TTC9Q92623 222 aa13.26□□□□□ -0.29
RNF43-202ENST00000577625 HTRA1Q92743 480 aa13.26□□□□□ -0.29
RNF43-202ENST00000577625 MTFMTQ96DP5 389 aaKnown RBP13.26□□□□□ -0.29
RNF43-202ENST00000577625 MRGPRX1Q96LB2 322 aa13.26□□□□□ -0.29
RNF43-202ENST00000577625 FRG2BQ96QU4 278 aa13.26□□□□□ -0.29
RNF43-202ENST00000577625 COQ7Q99807 217 aa13.26□□□□□ -0.29
RNF43-202ENST00000577625 CD93Q9NPY3 652 aa13.26□□□□□ -0.29
RNF43-202ENST00000577625 KCNN3Q9UGI6 736 aa13.26□□□□□ -0.29
RNF43-202ENST00000577625 FZD4Q9ULV1 537 aa13.26□□□□□ -0.29
RNF43-202ENST00000577625 OAZ3Q9UMX2 235 aa13.26□□□□□ -0.29
RNF43-202ENST00000577625 AQP12BA6NM10 295 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 B8ZZF3 427 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 E7EQ34 232 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 NME4O00746 187 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 TOR1BO14657 336 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 MAT2AP31153 395 aaKnown RBP13.25□□□□□ -0.29
RNF43-202ENST00000577625 PPP2CBP62714 309 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 PPP2CAP67775 309 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 CCINQ13939 588 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 NPTX1Q15818 432 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 CTF1Q16619 201 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 SPATS1Q496A3 300 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 HABP4Q5JVS0 413 aaKnown RBP13.25□□□□□ -0.29
RNF43-202ENST00000577625 RBM48Q5RL73 367 aaKnown RBP13.25□□□□□ -0.29
RNF43-202ENST00000577625 TMEM92Q6UXU6 159 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 AQP12AQ8IXF9 295 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 DPP10Q8N608 796 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 GRPEL2Q8TAA5 225 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 PHF10Q8WUB8 498 aaKnown RBP13.25□□□□□ -0.29
RNF43-202ENST00000577625 GAS2L1Q99501 681 aaPredicted RBP13.25□□□□□ -0.29
RNF43-202ENST00000577625 IRF2BPLQ9H1B7 796 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 PHPT1Q9NRX4 125 aaPredicted RBP13.25□□□□□ -0.29
RNF43-202ENST00000577625 ZNF221Q9UK13 617 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 AURKCQ9UQB9 309 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 UGT2A1Q9Y4X1 527 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 DNMT3AQ9Y6K1 912 aaPredicted RBP13.25□□□□□ -0.29
RNF43-202ENST00000577625 MAU2Q9Y6X3 613 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 TBC1D3DA0A087WVF3 549 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 TBC1D3IA0A087WXS9 549 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 TBC1D3EA0A087X179 549 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 TBC1D3KA0A087X1G2 549 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 DHRS12A0PJE2 317 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 TBC1D3FA6NER0 549 aaPredicted RBP13.25□□□□□ -0.29
RNF43-202ENST00000577625 GPR89AB7ZAQ6 455 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 TBC1D3LB9A6J9 549 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 EI24O14681 340 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 UPK1BO75841 260 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 KCNK2O95069 426 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 TBC1D3HP0C7X1 549 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 GPR89BP0CG08 455 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 FCGR1AP12314 374 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 HSD17B1P14061 328 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 PCSK2P16519 638 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 HTR1BP28222 390 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 PKLRP30613 574 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 HNF4AP41235 474 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 RPS9P46781 194 aaKnown RBP13.25□□□□□ -0.29
RNF43-202ENST00000577625 CTAG1AP78358 180 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 SLC13A2Q13183 592 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 CAPRIN1Q14444 709 aaKnown RBP13.25□□□□□ -0.29
RNF43-202ENST00000577625 PTGR1Q14914 329 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 PLCL1Q15111 1095 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 SKIV2LQ15477 1246 aaKnown RBP13.25□□□□□ -0.29
RNF43-202ENST00000577625 USP39Q53GS9 565 aaKnown RBP13.25□□□□□ -0.29
RNF43-202ENST00000577625 XKR6Q5GH73 641 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 TBC1D3GQ6DHY5 549 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 TBC1D3CQ6IPX1 549 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 UNC5DQ6UXZ4 953 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 USP30Q70CQ3 517 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 FAM124AQ86V42 546 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 CCDC28AQ8IWP9 274 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 TBC1D3Q8IZP1 549 aaPredicted RBP13.25□□□□□ -0.29
RNF43-202ENST00000577625 SPARTQ8N0X7 666 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 LIX1Q8N485 282 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 GLB1L3Q8NCI6 653 aaPredicted RBP13.25□□□□□ -0.29
RNF43-202ENST00000577625 OR9A1PQ8NGU1 263 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 CMTM7Q96FZ5 175 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 PHF7Q9BWX1 381 aaPredicted RBP13.25□□□□□ -0.29
RNF43-202ENST00000577625 FZD3Q9NPG1 666 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 GPRC5BQ9NZH0 403 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 NPAP1Q9NZP6 1156 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 SPEF1Q9Y4P9 236 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 PCDHGA8Q9Y5G5 932 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 PCDHA9Q9Y5H5 950 aa13.25□□□□□ -0.29
RNF43-202ENST00000577625 MN1Q10571 1320 aaPredicted RBP13.24□□□□□ -0.29
RNF43-202ENST00000577625 FAM149AA5PLN7 773 aa13.24□□□□□ -0.29
RNF43-202ENST00000577625 DLGAP3O95886 979 aa13.24□□□□□ -0.29
RNF43-202ENST00000577625 PTTG1O95997 202 aa13.24□□□□□ -0.29
RNF43-202ENST00000577625 GLULP15104 373 aa13.24□□□□□ -0.29
RNF43-202ENST00000577625 NDUFV2P19404 249 aa13.24□□□□□ -0.29
RNF43-202ENST00000577625 ATP6V1B2P21281 511 aa13.24□□□□□ -0.29
RNF43-202ENST00000577625 PSMA4P25789 261 aaKnown RBP13.24□□□□□ -0.29
RNF43-202ENST00000577625 GRK3P35626 688 aa13.24□□□□□ -0.29
RNF43-202ENST00000577625 CASP2P42575 452 aa13.24□□□□□ -0.29
RNF43-202ENST00000577625 TBPL1P62380 186 aa13.24□□□□□ -0.29
RNF43-202ENST00000577625 GALK2Q01415 458 aa13.24□□□□□ -0.29
RNF43-202ENST00000577625 DOC2AQ14183 400 aa13.24□□□□□ -0.29
RNF43-202ENST00000577625 CCDC85BQ15834 202 aaPredicted RBP13.24□□□□□ -0.29
RNF43-202ENST00000577625 ZNF181Q2M3W8 571 aa13.24□□□□□ -0.29
RNF43-202ENST00000577625 METRNLQ641Q3 311 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms