RNA–Protein interactions for RNA: ENST00000576502.5

NDE1-211, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-211ENST00000576502 MOCOSQ96EN8 888 aa13.05□□□□□ -0.32
NDE1-211ENST00000576502 NPLQ9BXD5 320 aaPredicted RBP13.05□□□□□ -0.32
NDE1-211ENST00000576502 FUT8Q9BYC5 575 aa13.05□□□□□ -0.32
NDE1-211ENST00000576502 CD244Q9BZW8 370 aa13.05□□□□□ -0.32
NDE1-211ENST00000576502 ROGDIQ9GZN7 287 aa13.05□□□□□ -0.32
NDE1-211ENST00000576502 COPS7BQ9H9Q2 264 aaPredicted RBP13.05□□□□□ -0.32
NDE1-211ENST00000576502 SNX15Q9NRS6 342 aa13.05□□□□□ -0.32
NDE1-211ENST00000576502 COPG2Q9UBF2 871 aa13.05□□□□□ -0.32
NDE1-211ENST00000576502 TMCO1Q9UM00 188 aa13.05□□□□□ -0.32
NDE1-211ENST00000576502 MRPS33Q9Y291 106 aaKnown RBP13.05□□□□□ -0.32
NDE1-211ENST00000576502 A0A096LPK6 155 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 K7EPI3 171 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 TAPBPO15533 448 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 B3GALT2O43825 422 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 PRMT3O60678 531 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 JRKO75564 520 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 KLHL2O95198 593 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 C2P06681 752 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 GFAPP14136 432 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 EPB42P16452 691 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 MSH2P43246 934 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 GLRBP48167 497 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 TAS2R50P59544 299 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 RAB8AP61006 207 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 PHEXP78562 749 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 Q0VFX4 171 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 CHIT1Q13231 466 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 BMPR2Q13873 1038 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 ZNF169Q14929 603 aaPredicted RBP13.04□□□□□ -0.32
NDE1-211ENST00000576502 TSNAXIP1Q2TAA8 658 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 BTBD16Q32M84 506 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 C18orf21Q32NC0 220 aaPredicted RBP13.04□□□□□ -0.32
NDE1-211ENST00000576502 PLEKHN1Q494U1 663 aaPredicted RBP13.04□□□□□ -0.32
NDE1-211ENST00000576502 ABHD17BQ5VST6 288 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 PLAG1Q6DJT9 500 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 QSOX2Q6ZRP7 698 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 LINC00696Q6ZRV3 163 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 ANKRD37Q7Z713 158 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 Q8NA96 180 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 SUN3Q8TAQ9 357 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 BRIX1Q8TDN6 353 aaKnown RBP13.04□□□□□ -0.32
NDE1-211ENST00000576502 CREB3L4Q8TEY5 395 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 SLC44A1Q8WWI5 657 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 NXNL1Q96CM4 212 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 WDR34Q96EX3 536 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 ATOH8Q96SQ7 321 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 CENPKQ9BS16 269 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 REXO4Q9GZR2 422 aaKnown RBP13.04□□□□□ -0.32
NDE1-211ENST00000576502 IGSF5Q9NSI5 407 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 LUZP4Q9P127 313 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 PTGFRNQ9P2B2 879 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 ADGRE2Q9UHX3 823 aa13.04□□□□□ -0.32
NDE1-211ENST00000576502 TNPO3Q9Y5L0 923 aaKnown RBP13.04□□□□□ -0.32
NDE1-211ENST00000576502 TRAV17A0A0B4J275 112 aa13.03□□□□□ -0.32
NDE1-211ENST00000576502 UBXN8O00124 270 aa13.03□□□□□ -0.32
NDE1-211ENST00000576502 CLDN4O14493 209 aa13.03□□□□□ -0.32
NDE1-211ENST00000576502 ERI3O43414 337 aaKnown RBP13.03□□□□□ -0.32
NDE1-211ENST00000576502 CDC123O75794 336 aaPredicted RBP13.03□□□□□ -0.32
NDE1-211ENST00000576502 SEC24DO94855 1032 aaPredicted RBP13.03□□□□□ -0.32
NDE1-211ENST00000576502 RBP1P09455 135 aa13.03□□□□□ -0.32
NDE1-211ENST00000576502 SOX11P35716 441 aa13.03□□□□□ -0.32
NDE1-211ENST00000576502 TSFMP43897 325 aaKnown RBP13.03□□□□□ -0.32
NDE1-211ENST00000576502 OR4D2P58180 307 aa13.03□□□□□ -0.32
NDE1-211ENST00000576502 DOC2AQ14183 400 aa13.03□□□□□ -0.32
NDE1-211ENST00000576502 ELOAQ14241 798 aaKnown RBP13.03□□□□□ -0.32
NDE1-211ENST00000576502 SFT2D3Q587I9 215 aa13.03□□□□□ -0.32
NDE1-211ENST00000576502 METTL2BQ6P1Q9 378 aaKnown RBP13.03□□□□□ -0.32
NDE1-211ENST00000576502 MED27Q6P2C8 311 aa13.03□□□□□ -0.32
NDE1-211ENST00000576502 SIRT6Q8N6T7 355 aa13.03□□□□□ -0.32
NDE1-211ENST00000576502 C7orf57Q8NEG2 295 aa13.03□□□□□ -0.32
NDE1-211ENST00000576502 OR2L5Q8NG80 312 aa13.03□□□□□ -0.32
NDE1-211ENST00000576502 OR5T3Q8NGG3 340 aa13.03□□□□□ -0.32
NDE1-211ENST00000576502 M1APQ8TC57 530 aa13.03□□□□□ -0.32
NDE1-211ENST00000576502 KCTD4Q8WVF5 259 aa13.03□□□□□ -0.32
NDE1-211ENST00000576502 REPS1Q96D71 796 aa13.03□□□□□ -0.32
NDE1-211ENST00000576502 IMMP1LQ96LU5 166 aa13.03□□□□□ -0.32
NDE1-211ENST00000576502 ZNF354BQ96LW1 612 aa13.03□□□□□ -0.32
NDE1-211ENST00000576502 PTCHD1Q96NR3 888 aa13.03□□□□□ -0.32
NDE1-211ENST00000576502 PAFAH2Q99487 392 aa13.03□□□□□ -0.32
NDE1-211ENST00000576502 RBCK1Q9BYM8 510 aa13.03□□□□□ -0.32
NDE1-211ENST00000576502 RNF32Q9H0A6 362 aa13.03□□□□□ -0.32
NDE1-211ENST00000576502 VPS11Q9H270 941 aa13.03□□□□□ -0.32
NDE1-211ENST00000576502 RHBGQ9H310 441 aa13.03□□□□□ -0.32
NDE1-211ENST00000576502 ZNF180Q9UJW8 692 aa13.03□□□□□ -0.32
NDE1-211ENST00000576502 MMACHCQ9Y4U1 282 aa13.03□□□□□ -0.32
NDE1-211ENST00000576502 PCDHGA10Q9Y5H3 936 aa13.03□□□□□ -0.32
NDE1-211ENST00000576502 COPG1Q9Y678 874 aaKnown RBP13.03□□□□□ -0.32
NDE1-211ENST00000576502 SPACA6W5XKT8 324 aa13.03□□□□□ -0.32
NDE1-211ENST00000576502 SHANK1Q9Y566 2161 aa13.03□□□□□ -0.32
NDE1-211ENST00000576502 EXOC1LA0A1B0GW35 172 aa13.02□□□□□ -0.33
NDE1-211ENST00000576502 LRIT2A6NDA9 550 aa13.02□□□□□ -0.33
NDE1-211ENST00000576502 CDK2AP1O14519 115 aa13.02□□□□□ -0.33
NDE1-211ENST00000576502 B4GALT2O60909 372 aa13.02□□□□□ -0.33
NDE1-211ENST00000576502 ABHD2P08910 425 aa13.02□□□□□ -0.33
NDE1-211ENST00000576502 SMIM10L1P0DMW3 83 aa13.02□□□□□ -0.33
NDE1-211ENST00000576502 COL6A2P12110 1019 aa13.02□□□□□ -0.33
NDE1-211ENST00000576502 CASP2P42575 452 aa13.02□□□□□ -0.33
NDE1-211ENST00000576502 KCNC1P48547 511 aa13.02□□□□□ -0.33
NDE1-211ENST00000576502 ALDH18A1P54886 795 aaKnown RBP13.02□□□□□ -0.33
NDE1-211ENST00000576502 OLR1P78380 273 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms