RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 MAGEA5P43359 124 aa15.13■□□□□ 0.01
CTDNEP1-211ENST00000575783 PPP2R2BQ00005 443 aa15.13■□□□□ 0.01
CTDNEP1-211ENST00000575783 MEF2AQ02078 507 aaPredicted RBP15.13■□□□□ 0.01
CTDNEP1-211ENST00000575783 TRIM14Q14142 442 aa15.13■□□□□ 0.01
CTDNEP1-211ENST00000575783 DEFB134Q4QY38 66 aa15.13■□□□□ 0.01
CTDNEP1-211ENST00000575783 WLSQ5T9L3 541 aa15.13■□□□□ 0.01
CTDNEP1-211ENST00000575783 IL20RBQ6UXL0 311 aa15.13■□□□□ 0.01
CTDNEP1-211ENST00000575783 MPP5Q8N3R9 675 aa15.13■□□□□ 0.01
CTDNEP1-211ENST00000575783 PEX13Q92968 403 aa15.13■□□□□ 0.01
CTDNEP1-211ENST00000575783 LRRC46Q96FV0 321 aa15.13■□□□□ 0.01
CTDNEP1-211ENST00000575783 PANX2Q96RD6 677 aa15.13■□□□□ 0.01
CTDNEP1-211ENST00000575783 LDAHQ9H6V9 325 aa15.13■□□□□ 0.01
CTDNEP1-211ENST00000575783 EXO5Q9H790 373 aa15.13■□□□□ 0.01
CTDNEP1-211ENST00000575783 LIN28AQ9H9Z2 209 aaKnown RBP15.13■□□□□ 0.01
CTDNEP1-211ENST00000575783 HPF1Q9NWY4 346 aa15.13■□□□□ 0.01
CTDNEP1-211ENST00000575783 CRYL1Q9Y2S2 319 aa15.13■□□□□ 0.01
CTDNEP1-211ENST00000575783 ATP6AP2A0A1C7CYW4 349 aa15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 GOLGA6L9A6NEM1 432 aa15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 TUBAL3A6NHL2 446 aa15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 E5RI56 91 aa15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 H3BMM5 538 aa15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 H7C1Q1 480 aa15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 ARHGEF9O43307 516 aa15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 GALR3O60755 368 aaPredicted RBP15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 ATP6AP2O75787 350 aa15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 MYO1DO94832 1006 aa15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 IGHG3P01860 377 aa15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 CELA3AP09093 270 aa15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 TPM1P09493 284 aa15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 CD53P19397 219 aa15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 BMP5P22003 454 aa15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 MAN2A2P49641 1150 aa15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 CRADDP78560 199 aa15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 RIPPLY2Q5TAB7 128 aa15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 NDUFAF5Q5TEU4 345 aa15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 KIAA0408Q6ZU52 694 aa15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 SDCCAG8Q86SQ7 713 aaPredicted RBP15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 SPNS2Q8IVW8 549 aa15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 TMEM251Q8N6I4 163 aa15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 APCDD1LQ8NCL9 501 aa15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 ZNF740Q8NDX6 193 aa15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 SREK1Q8WXA9 508 aaKnown RBP15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 RNASE6Q93091 150 aaKnown RBP15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 COX4I2Q96KJ9 171 aa15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 RHBGQ9H310 441 aa15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 CCDC177Q9NQR7 707 aaPredicted RBP15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 NECTIN3Q9NQS3 549 aa15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 BEX4Q9NWD9 120 aaPredicted RBP15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 ADAM21Q9UKJ8 722 aa15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 SH2B3Q9UQQ2 575 aa15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 YARS2Q9Y2Z4 477 aaKnown RBP15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 PHF3Q92576 2039 aaKnown RBP15.12■□□□□ 0.01
CTDNEP1-211ENST00000575783 SCN3AQ9NY46 2000 aa15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 ZNF407Q9C0G0 2248 aa15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 A0A1B0GVC2 190 aa15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 TCRBV16S1A1N1A0A5B0 115 aa15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 HSPB2A8KAH6 182 aa15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 GOLGA8KD6RF30 607 aa15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 GOLGA8TH3BQL2 631 aa15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 AQP7O14520 342 aa15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 GLSO94925 669 aaPredicted RBP15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 SERPIND1P05546 499 aa15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 EPXP11678 715 aa15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 IMPA1P29218 277 aa15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 GRK3P35626 688 aa15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 SESN2P58004 480 aaPredicted RBP15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 HSPB2Q16082 182 aa15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 PCID2Q5JVF3 399 aa15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 QSOX2Q6ZRP7 698 aa15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 P3H2Q8IVL5 708 aa15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 FAM109AQ8N4B1 249 aa15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 AFAP1L2Q8N4X5 818 aa15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 RELL2Q8NC24 303 aaPredicted RBP15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 ARMC2Q8NEN0 867 aa15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 B3GNT7Q8NFL0 401 aa15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 LINC01560Q8TB33 94 aa15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 ASB15Q8WXK1 588 aa15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 LPGAT1Q92604 370 aa15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 ALG3Q92685 438 aa15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 ALKBH8Q96BT7 664 aaKnown RBP15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 SARAFQ96BY9 339 aa15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 SH3GL2Q99962 352 aa15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 DNAJC13O75165 2243 aa15.11■□□□□ 0.01
CTDNEP1-211ENST00000575783 ZANQ9Y493 2812 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 DVL2O14641 736 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 NDUFS4O43181 175 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 ZBTB14O43829 449 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 MFAP3LO75121 409 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 OR2J2O76002 312 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 OR6B1O95007 311 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 VAPBO95292 243 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 ESR1P03372 595 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 ALOX12P18054 663 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 NMBRP28336 390 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 ASCL1P50553 236 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 TBPL1P62380 186 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 CUL1Q13616 776 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 SLC10A1Q14973 349 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 POU4F3Q15319 338 aa15.1■□□□□ 0.01
CTDNEP1-211ENST00000575783 RPS6KA1Q15418 735 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms