RNA–Protein interactions for RNA: ENST00000575313.1

CLDN7-208, Transcript of claudin 7, humanhuman

TSL 3

Gene CLDN7, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-208ENST00000575313 TCHHL1Q5QJ38 904 aaPredicted RBP16.99■□□□□ 0.31
CLDN7-208ENST00000575313 INO80CQ6PI98 192 aaPredicted RBP16.99■□□□□ 0.31
CLDN7-208ENST00000575313 LAS2Q8IYD9 372 aa16.99■□□□□ 0.31
CLDN7-208ENST00000575313 KIRREL3Q8IZU9 778 aa16.99■□□□□ 0.31
CLDN7-208ENST00000575313 TRPV3Q8NET8 790 aa16.99■□□□□ 0.31
CLDN7-208ENST00000575313 TTLQ8NG68 377 aa16.99■□□□□ 0.31
CLDN7-208ENST00000575313 OR7G3Q8NG95 312 aa16.99■□□□□ 0.31
CLDN7-208ENST00000575313 SNRNP27Q8WVK2 155 aaKnown RBP16.99■□□□□ 0.31
CLDN7-208ENST00000575313 MTFMTQ96DP5 389 aaKnown RBP16.99■□□□□ 0.31
CLDN7-208ENST00000575313 SEC16BQ96JE7 1060 aa16.99■□□□□ 0.31
CLDN7-208ENST00000575313 C10orf90Q96M02 699 aa16.99■□□□□ 0.31
CLDN7-208ENST00000575313 CPNE5Q9HCH3 593 aa16.99■□□□□ 0.31
CLDN7-208ENST00000575313 IFT80Q9P2H3 777 aaPredicted RBP16.99■□□□□ 0.31
CLDN7-208ENST00000575313 GPN3Q9UHW5 284 aaPredicted RBP16.99■□□□□ 0.31
CLDN7-208ENST00000575313 SNX6Q9UNH7 406 aa16.99■□□□□ 0.31
CLDN7-208ENST00000575313 PCDHGA11Q9Y5H2 935 aa16.99■□□□□ 0.31
CLDN7-208ENST00000575313 PKD1L2Q7Z442 2459 aa16.99■□□□□ 0.31
CLDN7-208ENST00000575313 ZNF891A8MT65 544 aaPredicted RBP16.98■□□□□ 0.31
CLDN7-208ENST00000575313 MANBAO00462 879 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 NDUFS4O43181 175 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 ONECUT2O95948 504 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 KRT6AP02538 564 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 KRT6BP04259 564 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 PCNAP12004 261 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 F8A1P23610 371 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 PTPN4P29074 926 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 KRT6CP48668 564 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 SEC24CP53992 1094 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 CXADRP78310 365 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 RGS1Q08116 209 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 IFT88Q13099 833 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 FAM53BQ14153 422 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 NCF4Q15080 339 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 COL28A1Q2UY09 1125 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 UGT3A2Q3SY77 523 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 CRTC2Q53ET0 693 aaPredicted RBP16.98■□□□□ 0.31
CLDN7-208ENST00000575313 SGO1Q5FBB7 561 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 FRG2Q64ET8 278 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 LCN10Q6JVE6 187 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 C19orf48Q6RUI8 117 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 FAM198BQ6UWH4 519 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 ARHGEF39Q8N4T4 335 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 AFAP1L2Q8N4X5 818 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 ANKRD53Q8N9V6 530 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 PIWIL2Q8TC59 973 aaKnown RBP16.98■□□□□ 0.31
CLDN7-208ENST00000575313 STARD8Q92502 1023 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 FKBP10Q96AY3 582 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 REPS1Q96D71 796 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 CHMP6Q96FZ7 201 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 FRG2BQ96QU4 278 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 ELOVL6Q9H5J4 265 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 FGFR1OP2Q9NVK5 253 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 MARCOQ9UEW3 520 aaPredicted RBP16.98■□□□□ 0.31
CLDN7-208ENST00000575313 IL17BQ9UHF5 180 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 FARSAQ9Y285 508 aaKnown RBP16.98■□□□□ 0.31
CLDN7-208ENST00000575313 PADI2Q9Y2J8 665 aa16.98■□□□□ 0.31
CLDN7-208ENST00000575313 MDC1Q14676 2089 aaKnown RBP16.98■□□□□ 0.31
CLDN7-208ENST00000575313 GMNCA6NCL1 334 aa16.97■□□□□ 0.31
CLDN7-208ENST00000575313 ANKDD1BA6NHY2 528 aa16.97■□□□□ 0.31
CLDN7-208ENST00000575313 SLCO1B7G3V0H7 640 aa16.97■□□□□ 0.31
CLDN7-208ENST00000575313 ULK1O75385 1050 aa16.97■□□□□ 0.31
CLDN7-208ENST00000575313 RECKO95980 971 aa16.97■□□□□ 0.31
CLDN7-208ENST00000575313 CHEK2O96017 543 aa16.97■□□□□ 0.31
CLDN7-208ENST00000575313 WT1P19544 449 aaPredicted RBP16.97■□□□□ 0.31
CLDN7-208ENST00000575313 HTR6P50406 440 aa16.97■□□□□ 0.31
CLDN7-208ENST00000575313 NEK2P51955 445 aa16.97■□□□□ 0.31
CLDN7-208ENST00000575313 TMEM214Q6NUQ4 689 aaKnown RBP16.97■□□□□ 0.31
CLDN7-208ENST00000575313 HOMEZQ8IX15 550 aa16.97■□□□□ 0.31
CLDN7-208ENST00000575313 ENDOVQ8N8Q3 282 aaKnown RBP16.97■□□□□ 0.31
CLDN7-208ENST00000575313 WDR20Q8TBZ3 569 aa16.97■□□□□ 0.31
CLDN7-208ENST00000575313 NT5CQ8TCD5 201 aa16.97■□□□□ 0.31
CLDN7-208ENST00000575313 FAR2Q96K12 515 aa16.97■□□□□ 0.31
CLDN7-208ENST00000575313 ACTL8Q9H568 366 aa16.97■□□□□ 0.31
CLDN7-208ENST00000575313 PRORYQ9H606 182 aa16.97■□□□□ 0.31
CLDN7-208ENST00000575313 ZNF304Q9HCX3 659 aa16.97■□□□□ 0.31
CLDN7-208ENST00000575313 FARSBQ9NSD9 589 aaKnown RBP16.97■□□□□ 0.31
CLDN7-208ENST00000575313 DNAJC15Q9Y5T4 150 aa16.97■□□□□ 0.31
CLDN7-208ENST00000575313 CREG1O75629 220 aa16.96■□□□□ 0.31
CLDN7-208ENST00000575313 MED26O95402 600 aa16.96■□□□□ 0.31
CLDN7-208ENST00000575313 PDYNP01213 254 aa16.96■□□□□ 0.31
CLDN7-208ENST00000575313 ALBP02768 609 aa16.96■□□□□ 0.31
CLDN7-208ENST00000575313 STATHP02808 62 aa16.96■□□□□ 0.31
CLDN7-208ENST00000575313 SERPIND1P05546 499 aa16.96■□□□□ 0.31
CLDN7-208ENST00000575313 ITGAXP20702 1163 aa16.96■□□□□ 0.31
CLDN7-208ENST00000575313 AVPR1BP47901 424 aa16.96■□□□□ 0.31
CLDN7-208ENST00000575313 DDX39BQ13838 428 aaKnown RBP16.96■□□□□ 0.31
CLDN7-208ENST00000575313 ABRAXAS2Q15018 415 aa16.96■□□□□ 0.31
CLDN7-208ENST00000575313 ARHGAP40Q5TG30 622 aa16.96■□□□□ 0.31
CLDN7-208ENST00000575313 MLIPQ5VWP3 458 aa16.96■□□□□ 0.31
CLDN7-208ENST00000575313 SCIMPQ6UWF3 145 aa16.96■□□□□ 0.31
CLDN7-208ENST00000575313 GPR155Q7Z3F1 870 aa16.96■□□□□ 0.31
CLDN7-208ENST00000575313 WDR75Q8IWA0 830 aaKnown RBP16.96■□□□□ 0.31
CLDN7-208ENST00000575313 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.96■□□□□ 0.31
CLDN7-208ENST00000575313 HUS1BQ8NHY5 278 aa16.96■□□□□ 0.31
CLDN7-208ENST00000575313 TWIST2Q8WVJ9 160 aa16.96■□□□□ 0.31
CLDN7-208ENST00000575313 SELENOMQ8WWX9 145 aa16.96■□□□□ 0.31
CLDN7-208ENST00000575313 RHBGQ9H310 441 aa16.96■□□□□ 0.31
CLDN7-208ENST00000575313 PRM3Q9NNZ6 103 aa16.96■□□□□ 0.31
CLDN7-208ENST00000575313 VTI1BQ9UEU0 232 aa16.96■□□□□ 0.31
CLDN7-208ENST00000575313 ADGRE2Q9UHX3 823 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms