RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 ARHGEF39Q8N4T4 335 aa10.08□□□□□ -0.8
LITAF-216ENST00000574848 ZNF781Q8N8C0 355 aa10.08□□□□□ -0.8
LITAF-216ENST00000574848 TEX19Q8NA77 164 aa10.08□□□□□ -0.8
LITAF-216ENST00000574848 CLEC18CQ8NCF0 446 aa10.08□□□□□ -0.8
LITAF-216ENST00000574848 FDCSPQ8NFU4 85 aa10.08□□□□□ -0.8
LITAF-216ENST00000574848 ANKRD49Q8WVL7 239 aa10.08□□□□□ -0.8
LITAF-216ENST00000574848 MVB12AQ96EY5 273 aa10.08□□□□□ -0.8
LITAF-216ENST00000574848 C10orf90Q96M02 699 aa10.08□□□□□ -0.8
LITAF-216ENST00000574848 FER1L6-AS2Q96M78 137 aa10.08□□□□□ -0.8
LITAF-216ENST00000574848 DPH7Q9BTV6 452 aa10.08□□□□□ -0.8
LITAF-216ENST00000574848 NUDT9Q9BW91 350 aa10.08□□□□□ -0.8
LITAF-216ENST00000574848 C20orf27Q9GZN8 174 aa10.08□□□□□ -0.8
LITAF-216ENST00000574848 MRPS30Q9NP92 439 aaKnown RBP10.08□□□□□ -0.8
LITAF-216ENST00000574848 PFDN4Q9NQP4 134 aa10.08□□□□□ -0.8
LITAF-216ENST00000574848 GPR83Q9NYM4 423 aa10.08□□□□□ -0.8
LITAF-216ENST00000574848 C5AR2Q9P296 337 aa10.08□□□□□ -0.8
LITAF-216ENST00000574848 TSR3Q9UJK0 312 aaKnown RBP10.08□□□□□ -0.8
LITAF-216ENST00000574848 G3BP2Q9UN86 482 aaKnown RBP10.08□□□□□ -0.8
LITAF-216ENST00000574848 STK38LQ9Y2H1 464 aa10.08□□□□□ -0.8
LITAF-216ENST00000574848 FLNBO75369 2602 aaKnown RBP10.08□□□□□ -0.8
LITAF-216ENST00000574848 CCDC88CQ9P219 2028 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 FLNCQ14315 2725 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 IGLV3-12A0A075B6K2 115 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 LOC105369274A0A096LPK9 316 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 LOC102723532A0A0G2JNH3 316 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 A0A0J9YVX5 310 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 HYKKA2RU49 373 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 SUPT3HB4E1H0 165 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 SLC22A2O15244 555 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 ZBTB14O43829 449 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 SUPT3HO75486 399 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 MED26O95402 600 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 NQO1P15559 274 aaKnown RBP10.07□□□□□ -0.8
LITAF-216ENST00000574848 GMPRP36959 345 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 IDH3AP50213 366 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 CCL11P51671 97 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 ALDH18A1P54886 795 aaKnown RBP10.07□□□□□ -0.8
LITAF-216ENST00000574848 VSX2P58304 361 aaPredicted RBP10.07□□□□□ -0.8
LITAF-216ENST00000574848 HERVK_113P63132 956 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 MYBPC3Q14896 1274 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 SLC9A5Q14940 896 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 FBXO42Q6P3S6 717 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 PAQR3Q6TCH7 311 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 EPGNQ6UW88 154 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 SUSD1Q6UWL2 747 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 FRMD7Q6ZUT3 714 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 FRA10AC1Q70Z53 315 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 ASRGL1Q7L266 308 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 ADAMTSL2Q86TH1 951 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 OR4N4Q8N0Y3 316 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 MYO1HQ8N1T3 1032 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 PDLIM5Q96HC4 596 aaKnown RBP10.07□□□□□ -0.8
LITAF-216ENST00000574848 OR2A5Q96R48 311 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 CCDC28BQ9BUN5 200 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 ACAT2Q9BWD1 397 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 ERVK-6Q9BXR3 956 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 NMUR2Q9GZQ4 415 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 ZNF395Q9H8N7 513 aaPredicted RBP10.07□□□□□ -0.8
LITAF-216ENST00000574848 SYNPO2LQ9H987 977 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 TCF7L2Q9NQB0 619 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 PNPOQ9NVS9 261 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 P4HTMQ9NXG6 502 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 UTP6Q9NYH9 597 aaKnown RBP10.07□□□□□ -0.8
LITAF-216ENST00000574848 CTSFQ9UBX1 484 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 TAC3Q9UHF0 121 aa10.07□□□□□ -0.8
LITAF-216ENST00000574848 MDC1Q14676 2089 aaKnown RBP10.06□□□□□ -0.8
LITAF-216ENST00000574848 RELNP78509 3460 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 A0A1W2PQ72 361 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 PABPN1LA6NDY0 278 aaKnown RBP10.06□□□□□ -0.8
LITAF-216ENST00000574848 H0YGG7 62 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 STX16-NPEPL1H3BU86 382 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 PEX12O00623 359 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 SOCS6O14544 535 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 STX16O14662 325 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 SLC16A5O15375 505 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 KLHL41O60662 606 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 DPM1O60762 260 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 SUPT7LO94864 414 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 TSPAN12O95859 305 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 C8GP07360 202 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 ALAS2P22557 587 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 HRH2P25021 359 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 PRDX6P30041 224 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 ADSLP30566 484 aaPredicted RBP10.06□□□□□ -0.8
LITAF-216ENST00000574848 FOXL2P58012 376 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 ARF3P61204 181 aaPredicted RBP10.06□□□□□ -0.8
LITAF-216ENST00000574848 IRX1P78414 480 aaPredicted RBP10.06□□□□□ -0.8
LITAF-216ENST00000574848 SPRED3Q2MJR0 410 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 MUM1Q2TAK8 710 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 DNAL1Q4LDG9 190 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 SH2D4BQ5SQS7 431 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 ZNF678Q5SXM1 525 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 GARNL3Q5VVW2 1013 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 TMEM207Q6UWW9 146 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 IGFL3Q6UXB1 125 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 UBE2R2Q712K3 238 aaPredicted RBP10.06□□□□□ -0.8
LITAF-216ENST00000574848 SPNS2Q8IVW8 549 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 TMEM151BQ8IW70 566 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 CLEC1AQ8NC01 280 aa10.06□□□□□ -0.8
LITAF-216ENST00000574848 PPFIBP2Q8ND30 876 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms