RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 THAP11Q96EK4 314 aa9.15□□□□□ -0.94
NPLOC4-216ENST00000574344 MAGEB10Q96LZ2 347 aaPredicted RBP9.15□□□□□ -0.94
NPLOC4-216ENST00000574344 EGFL8Q99944 293 aa9.15□□□□□ -0.94
NPLOC4-216ENST00000574344 HAUS8Q9BT25 410 aa9.15□□□□□ -0.94
NPLOC4-216ENST00000574344 TGIF2Q9GZN2 237 aa9.15□□□□□ -0.94
NPLOC4-216ENST00000574344 FGFR1OP2Q9NVK5 253 aa9.15□□□□□ -0.94
NPLOC4-216ENST00000574344 MKS1Q9NXB0 559 aa9.15□□□□□ -0.94
NPLOC4-216ENST00000574344 C19orf25Q9UFG5 118 aaPredicted RBP9.15□□□□□ -0.94
NPLOC4-216ENST00000574344 MRPS2Q9Y399 296 aaKnown RBP9.15□□□□□ -0.94
NPLOC4-216ENST00000574344 IGHV1-45A0A0A0MS14 117 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 FAM95CA0A1B0GW59 222 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 A1L4Q6 167 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 ZNF860A6NHJ4 632 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 TRIM49D1C9J1S8 452 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 H0YHG0 523 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 H0YIG0 161 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 SGK494L7N484 410 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 NDUFS4O43181 175 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 OR1F1O43749 312 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 TYROBPO43914 113 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 RDH16O75452 317 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 JRKO75564 520 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 KLHL18O94889 574 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 SERPINA7P05543 415 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 CELA2AP08217 269 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 CCR8P51685 355 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 FRG1Q14331 258 aaKnown RBP9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 TLR1Q15399 786 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 B3GNTL1Q67FW5 361 aaPredicted RBP9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 IGFL2Q6UWQ7 119 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 RGS9BPQ6ZS82 235 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 FRA10AC1Q70Z53 315 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 STRA8Q7Z7C7 330 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 KCT2Q8NC54 265 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 OR1N1Q8NGS0 311 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 OR51Q1Q8NH59 317 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 ACMSDQ8TDX5 336 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 SLC13A3Q8WWT9 602 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 TSNARE1Q96NA8 513 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 OLFM1Q99784 485 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 CPNE1Q99829 537 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 SGPP1Q9BX95 441 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 RBCK1Q9BYM8 510 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 VN1R1Q9GZP7 353 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 KLHL14Q9P2G3 628 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 NTNG1Q9Y2I2 539 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 ARL2BPQ9Y2Y0 163 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 VWA7Q9Y334 891 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 DYRK1BQ9Y463 629 aa9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 DIDO1Q9BTC0 2240 aaKnown RBP9.14□□□□□ -0.95
NPLOC4-216ENST00000574344 KCNE1BA0A087WTH5 132 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 NPEPPSL1A6NEC2 478 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 LCMT2O60294 686 aaKnown RBP9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 GLRA3O75311 464 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 CDC123O75794 336 aaPredicted RBP9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 DCTN3O75935 186 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 SEC24DO94855 1032 aaPredicted RBP9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 BMP10O95393 424 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 CBX6O95503 412 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 TSPAN12O95859 305 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 F10P00742 488 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 ENO2P09104 434 aaPredicted RBP9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 ITGAMP11215 1152 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 ICAM2P13598 275 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 CREB1P16220 341 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 ZNF37AP17032 561 aaPredicted RBP9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 ALDH3A1P30838 453 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 GP5P40197 560 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 TSFMP43897 325 aaKnown RBP9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 SERPINB8P50452 374 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 SLC12A2P55011 1212 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 CORO7P57737 925 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 SNRPNP63162 240 aaKnown RBP9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 SKP1P63208 163 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 ZNF33BQ06732 778 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 RGS1Q08116 209 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 ILF2Q12905 390 aaKnown RBP9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 IFT88Q13099 833 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 CSHL1Q14406 222 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 ZNF460Q14592 562 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 SETDB1Q15047 1291 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 PCOLCEQ15113 449 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 BTBD16Q32M84 506 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 ABHD17BQ5VST6 288 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 TMEM214Q6NUQ4 689 aaKnown RBP9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 RIPOR1Q6ZS17 1223 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 LANCL3Q6ZV70 420 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 TMPRSS11BQ86T26 416 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 ARHGEF39Q8N4T4 335 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 NKAPQ8N5F7 415 aaKnown RBP9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 BANPQ8N9N5 519 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 MFSD9Q8NBP5 474 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 SUN3Q8TAQ9 357 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 RAB3IL1Q8TBN0 382 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 TCP10LQ8TDR4 215 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 GRHL3Q8TE85 626 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 MZB1Q8WU39 189 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 SLC5A11Q8WWX8 675 aa9.13□□□□□ -0.95
NPLOC4-216ENST00000574344 FBXL8Q96CD0 374 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms