RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 STT3BQ8TCJ2 826 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 TCP10LQ8TDR4 215 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 ZNF473Q8WTR7 871 aaKnown RBP12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 MS4A6EQ96DS6 147 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 NSUN5Q96P11 429 aaKnown RBP12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 KCNC2Q96PR1 638 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 FAM111AQ96PZ2 611 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 CDK15Q96Q40 435 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 FRG2BQ96QU4 278 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 ZNF382Q96SR6 550 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 TGIF2Q9GZN2 237 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 ELOVL6Q9H5J4 265 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 ZBTB26Q9HCK0 441 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 SEMA3GQ9NS98 782 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 PSD3Q9NYI0 1048 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 CTSFQ9UBX1 484 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 TRPS1Q9UHF7 1281 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 SNX6Q9UNH7 406 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 LHX6Q9UPM6 363 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 MRPS2Q9Y399 296 aaKnown RBP12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 VSTM2BA6NLU5 285 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 PSMD12O00232 456 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 FOXE1O00358 373 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 PEX12O00623 359 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 TM9SF1O15321 606 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 B3GALT2O43825 422 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 TRIM13O60858 407 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 RDH16O75452 317 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 HEXBP07686 556 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 CYC1P08574 325 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 JAK1P23458 1154 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 TSFMP43897 325 aaKnown RBP12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 XCR1P46094 333 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 RAP1GDS1P52306 607 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 ARFIP1P53367 373 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 PLA2G16P53816 162 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 NAGLUP54802 743 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 RRADP55042 308 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 PKNOX1P55347 436 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 HYAL2Q12891 473 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 AP5B1Q2VPB7 878 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 ADPRMQ3LIE5 342 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 MFSD4BQ5TF39 518 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 BORAQ6PGQ7 559 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 GPRIN3Q6ZVF9 776 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 HDXQ7Z353 690 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 EXOC3L1Q86VI1 746 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 DTWD1Q8N5C7 304 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 AMER3Q8N944 861 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 ADAMTS18Q8TE60 1221 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 CRELD1Q96HD1 420 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 OR1F2PQ96R84 312 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 MTERF1Q99551 399 aaKnown RBP12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 SPSB2Q99619 263 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 ARHGAP9Q9BRR9 750 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 TBCDQ9BTW9 1192 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 CRB3Q9BUF7 120 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 NPLQ9BXD5 320 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 MS4A8Q9BY19 250 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 KLHL31Q9H511 634 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 SOX17Q9H6I2 414 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 NMRK1Q9NWW6 199 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 HCN3Q9P1Z3 774 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 PPT2Q9UMR5 302 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 MAN2B2Q9Y2E5 1009 aa12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 DSPP15924 2871 aaKnown RBP12.09□□□□□ -0.47
TRAPPC1-206ENST00000573989 NUP210LQ5VU65 1888 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 SCN2AQ99250 2005 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 TYROBPO43914 113 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 CRCPO75575 148 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 ZWINTO95229 277 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 BMP10O95393 424 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 TGFB1P01137 390 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 KRT6AP02538 564 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 KRT6BP04259 564 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 ENO1P06733 434 aaKnown RBP12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 SMIM10L1P0DMW3 83 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 MMP11P24347 488 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 HMOX2P30519 316 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 HNRNPH1P31943 449 aaKnown RBP12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 OTX2P32243 289 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 CCR10P46092 362 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 KRT6CP48668 564 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 MTTPP55157 894 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 BTN3A2P78410 334 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 MAT1AQ00266 395 aaKnown RBP12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 KLC1Q07866 573 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 IL10RAQ13651 578 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 PCLAFQ15004 111 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 DEFB109BQ30KR1 87 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 VWA2Q5GFL6 755 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 TNFAIP8L3Q5GJ75 292 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 DEPDC1Q5TB30 811 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 KHDRBS2Q5VWX1 349 aaKnown RBP12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 ABHD17CQ6PCB6 329 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 RPS27LQ71UM5 84 aaKnown RBP12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 PRSS41Q7RTY9 318 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 VN1R5Q7Z5H4 357 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 PDSS2Q86YH6 399 aa12.08□□□□□ -0.48
TRAPPC1-206ENST00000573989 C10orf107Q8IVU9 208 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms