RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 IRF3Q14653 427 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 AGAP6Q5VW22 663 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 NXNL2Q5VZ03 156 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 RNF180Q86T96 592 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 CCDC190Q86UF4 302 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 LILRA3Q8N6C8 439 aaPredicted RBP16.76■□□□□ 0.27
SCARF1-205ENST00000571272 HUS1BQ8NHY5 278 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 WDR36Q8NI36 951 aaKnown RBP16.76■□□□□ 0.27
SCARF1-205ENST00000571272 AGAP4Q96P64 663 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 OR4K3Q96R72 315 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 VN1R3Q9BXE9 311 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 SUV39H2Q9H5I1 410 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 TRIM39Q9HCM9 518 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 CORO2BQ9UQ03 480 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 KLK4Q9Y5K2 254 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 PLXNB3Q9ULL4 1909 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 CASP8AP2Q9UKL3 1982 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 FAM227AF5H4B4 570 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 SAP18O00422 153 aaKnown RBP16.76■□□□□ 0.27
SCARF1-205ENST00000571272 C6orf47O95873 294 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 PCSK2P16519 638 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 PPIBP23284 216 aaKnown RBP16.76■□□□□ 0.27
SCARF1-205ENST00000571272 CST5P28325 142 aaPredicted RBP16.76■□□□□ 0.27
SCARF1-205ENST00000571272 MC1RQ01726 317 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 TSTA3Q13630 321 aaPredicted RBP16.76■□□□□ 0.27
SCARF1-205ENST00000571272 ANXA8L1Q5VT79 327 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 MMAAQ8IVH4 418 aaKnown RBP16.76■□□□□ 0.27
SCARF1-205ENST00000571272 CACTIN-AS1Q8N1I8 211 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 ZNF461Q8TAF7 563 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 YME1L1Q96TA2 773 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 SLC35A5Q9BS91 424 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 CNPPD1Q9BV87 410 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 SPATA9Q9BWV2 254 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 MOV10Q9HCE1 1003 aaKnown RBP16.76■□□□□ 0.27
SCARF1-205ENST00000571272 B4GALT6Q9UBX8 382 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 EXO1Q9UQ84 846 aaKnown RBP16.76■□□□□ 0.27
SCARF1-205ENST00000571272 NOX1Q9Y5S8 564 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 ANAPC1Q9H1A4 1944 aa16.76■□□□□ 0.27
SCARF1-205ENST00000571272 A8MV72 311 aaPredicted RBP16.75■□□□□ 0.27
SCARF1-205ENST00000571272 AGRPO00253 132 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 PLK4O00444 970 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 GPX5O75715 221 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 MFN2O95140 757 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 RPS13P62277 151 aaKnown RBP16.75■□□□□ 0.27
SCARF1-205ENST00000571272 CAP1Q01518 475 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 LRRC26Q2I0M4 334 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 TCTN1Q2MV58 587 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 PLEKHS1Q5SXH7 462 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 AGTRAPQ6RW13 159 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 PTCHD4Q6ZW05 846 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 OTOP2Q7RTS6 562 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 NRARPQ7Z6K4 114 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 OR7G3Q8NG95 312 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 VANGL1Q8TAA9 524 aaPredicted RBP16.75■□□□□ 0.27
SCARF1-205ENST00000571272 CLP1Q92989 425 aaKnown RBP16.75■□□□□ 0.27
SCARF1-205ENST00000571272 CIDECQ96AQ7 238 aaPredicted RBP16.75■□□□□ 0.27
SCARF1-205ENST00000571272 CRELD1Q96HD1 420 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 NEDD4LQ96PU5 975 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 IL4I1Q96RQ9 567 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 C19orf43Q9BQ61 176 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 SLC30A2Q9BRI3 323 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 DDX28Q9NUL7 540 aaKnown RBP16.75■□□□□ 0.27
SCARF1-205ENST00000571272 SPATA7Q9P0W8 599 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 ZNF282Q9UDV7 671 aaPredicted RBP16.75■□□□□ 0.27
SCARF1-205ENST00000571272 PRAMEF33A0A0G2JMD5 474 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 PRAMEF10O60809 474 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 SRCP12931 536 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 TNFSF8P32971 234 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 ASMTP46597 345 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 PREPP48147 710 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 SPINT3P49223 89 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 SP140Q13342 867 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 KRR1Q13601 381 aaKnown RBP16.75■□□□□ 0.27
SCARF1-205ENST00000571272 EIF4HQ15056 248 aaKnown RBP16.75■□□□□ 0.27
SCARF1-205ENST00000571272 SSX1Q16384 188 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 CCDC80Q76M96 950 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 ATCAYQ86WG3 371 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 NPAS4Q8IUM7 802 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 LMNTD1Q8N9Z9 388 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 AQP11Q8NBQ7 271 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 ACER3Q9NUN7 267 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 ABCB8Q9NUT2 735 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 CFL2Q9Y281 166 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 ZNF106Q9H2Y7 1883 aaKnown RBP16.75■□□□□ 0.27
SCARF1-205ENST00000571272 CKMT1AP12532 417 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 BDKRB1P46663 353 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 CSNK1DP48730 415 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 CDC42P60953 191 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 SNRPD1P62314 119 aaKnown RBP16.75■□□□□ 0.27
SCARF1-205ENST00000571272 GPNMBQ14956 572 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 GCNT6Q5T4J0 391 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 IER5LQ5T953 404 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 ZNF367Q7RTV3 350 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 ELAC1Q9H777 363 aaKnown RBP16.75■□□□□ 0.27
SCARF1-205ENST00000571272 RMI1Q9H9A7 625 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 WDR70Q9NW82 654 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 WBP11Q9Y2W2 641 aaKnown RBP16.75■□□□□ 0.27
SCARF1-205ENST00000571272 N6AMT1Q9Y5N5 214 aa16.75■□□□□ 0.27
SCARF1-205ENST00000571272 TMEM88BA6NKF7 163 aa16.74■□□□□ 0.27
SCARF1-205ENST00000571272 H3BQ06 376 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms