RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 NAT10Q9H0A0 1025 aaKnown RBP9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 TMEM184CQ9NVA4 438 aa9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 SPRR3Q9UBC9 169 aa9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 MTRF1LQ9UGC7 380 aaKnown RBP9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 RIMKLBQ9ULI2 386 aa9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 YARS2Q9Y2Z4 477 aaKnown RBP9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 PCDHA3Q9Y5H8 950 aa9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 SLC22A7Q9Y694 548 aa9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 RAI1Q7Z5J4 1906 aaPredicted RBP9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 IGKV3D-11A0A0A0MRZ8 115 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 TCRBV16S1A1N1A0A5B0 115 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 ZNF839A8K0R7 811 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 A8MVJ9 347 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 KDM4EB2RXH2 506 aaPredicted RBP9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 CD3EAPO15446 510 aaKnown RBP9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 CHST10O43529 356 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 AKR1B10O60218 316 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 PRKNO60260 465 aaPredicted RBP9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 LCMT2O60294 686 aaKnown RBP9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 OR6B1O95007 311 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 B3GALT4O96024 378 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 MAOAP21397 527 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 RPS3P23396 243 aaKnown RBP eCLIP9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 JAK1P23458 1154 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 CEACAM8P31997 349 aaPredicted RBP9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 HSD17B2P37059 387 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 COILP38432 576 aaPredicted RBP9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 TTPAP49638 278 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 WNT3P56703 355 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 PRAMEP78395 509 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 FOXO1Q12778 655 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 SLC10A1Q14973 349 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 ZNF750Q32MQ0 723 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 XKR6Q5GH73 641 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 AARS2Q5JTZ9 985 aaKnown RBP9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 CTSL3PQ5NE16 218 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 THEMIS2Q5TEJ8 643 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 MEI1Q5TIA1 1274 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 IL20RBQ6UXL0 311 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 QSOX2Q6ZRP7 698 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 GK5Q6ZS86 529 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 ASPGQ86U10 573 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 KIF18BQ86Y91 864 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 AFAP1L2Q8N4X5 818 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 SLC13A3Q8WWT9 602 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 FAM136AQ96C01 138 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 THAP11Q96EK4 314 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 CAPZA3Q96KX2 299 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 ANP32EQ9BTT0 268 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 LDAHQ9H6V9 325 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 LIN28AQ9H9Z2 209 aaKnown RBP9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 IL1RL2Q9HB29 575 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 NECTIN3Q9NQS3 549 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 CATSPERZQ9NTU4 200 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 SPTLC3Q9NUV7 552 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 HPF1Q9NWY4 346 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 GALPQ9UBC7 116 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 ZNF629Q9UEG4 869 aaPredicted RBP9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 ANAPC5Q9UJX4 755 aa9.67□□□□□ -0.86
CTDNEP1-202ENST00000570380 CR1P17927 2039 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 ANK2Q01484 3957 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 TRGV5A0A0B4J1U4 118 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 PJA2O43164 708 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 PSMD3O43242 534 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 GALR3O60755 368 aaPredicted RBP9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 NIPSNAP2O75323 286 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 OR2J2O76002 312 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 CATP04040 527 aaKnown RBP9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 BMP7P18075 431 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 CNR1P21554 472 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 ADRA1DP25100 572 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 ATP5DP30049 168 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 GRIA1P42261 906 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 GPR143P51810 404 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 ZNF136P52737 540 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 EIF3BP55884 814 aaKnown RBP9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 SORDQ00796 357 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 KRTAP1-1Q07627 177 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 CDH17Q12864 832 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 KCNJ11Q14654 390 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 HERC3Q15034 1050 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 HYAL4Q2M3T9 481 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 KLHL38Q2WGJ6 581 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 ACSBG2Q5FVE4 666 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 CAPN13Q6MZZ7 669 aaPredicted RBP9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 LINC00523Q86TU6 105 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 LRRC6Q86X45 466 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 GPALPP1Q8IXQ4 340 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 ULK2Q8IYT8 1036 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 FAM71DQ8N9W8 422 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 ASB15Q8WXK1 588 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 TMEM158Q8WZ71 300 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 PIGTQ969N2 578 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 IQCDQ96DY2 449 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 BIRC8Q96P09 236 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 FAM173AQ9BQD7 235 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 OSBPL8Q9BZF1 889 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 EPB41L4BQ9H329 900 aa9.66□□□□□ -0.86
CTDNEP1-202ENST00000570380 EXO5Q9H790 373 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms