RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 RPS6KA6Q9UK32 745 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 INSL6Q9Y581 213 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 LATO43561 262 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 FAM20BO75063 409 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 LINC00271P0C7V0 271 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 NPPBP16860 134 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 IDSP22304 550 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 CHI3L1P36222 383 aaPredicted RBP8.41□□□□□ -1.06
LINC00558-201ENST00000569422 IDH2P48735 452 aaKnown RBP8.41□□□□□ -1.06
LINC00558-201ENST00000569422 PPM1FP49593 454 aaPredicted RBP8.41□□□□□ -1.06
LINC00558-201ENST00000569422 PRLHRP49683 370 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 RPS26P62854 115 aaKnown RBP8.41□□□□□ -1.06
LINC00558-201ENST00000569422 EMX1Q04741 257 aaPredicted RBP8.41□□□□□ -1.06
LINC00558-201ENST00000569422 EPS8Q12929 822 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 GANABQ14697 944 aaKnown RBP8.41□□□□□ -1.06
LINC00558-201ENST00000569422 RGNQ15493 299 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 SHQ1Q6PI26 577 aaKnown RBP8.41□□□□□ -1.06
LINC00558-201ENST00000569422 AHSA2Q719I0 299 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 SERPINA11Q86U17 422 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 SNX29P2Q8IUI4 249 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 CCDC116Q8IYX3 515 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 TANKQ92844 425 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 KLK6Q92876 244 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 BADQ92934 168 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 RSPRY1Q96DX4 576 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 MAGIXQ9H6Y5 334 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 PLGRKTQ9HBL7 147 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 TBC1D3BA6NDS4 549 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 H0YC42 278 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 J3KTA2 159 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 NPC1O15118 1278 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 AP2A2O94973 939 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 C6P13671 934 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 GPX2P18283 190 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 TGFBR1P36897 503 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 HPCAL1P37235 193 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 NUDT6P53370 316 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 LIMK1P53667 647 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 MLLT10P55197 1068 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 C21orf59P57076 290 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 LRRC74AQ0VAA2 488 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 MTAPQ13126 283 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 SLCO4C1Q6ZQN7 724 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 DPPA4Q7L190 304 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 B3GNT8Q7Z7M8 397 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 PLD3Q8IV08 490 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 PLA2G15Q8NCC3 412 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 PJA1Q8NG27 643 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 OR5AR1Q8NGP9 310 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 DNAJB8Q8NHS0 232 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 NFKBIDQ8NI38 313 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 UTP15Q8TED0 518 aaKnown RBP8.4□□□□□ -1.06
LINC00558-201ENST00000569422 GIPC3Q8TF64 312 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 ARRDC3Q96B67 414 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 NUS1Q96E22 293 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 SLC35A5Q9BS91 424 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 TM9SF3Q9HD45 589 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 CD93Q9NPY3 652 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 DYRK4Q9NR20 520 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 TMEM184CQ9NVA4 438 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 FAM120CQ9NX05 1096 aaKnown RBP8.4□□□□□ -1.06
LINC00558-201ENST00000569422 IL20Q9NYY1 176 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.4□□□□□ -1.06
LINC00558-201ENST00000569422 AP3M1Q9Y2T2 418 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 H0YIV9 168 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 NDUFS2O75306 463 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 SEC14L2O76054 403 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 CPNE6O95741 557 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 PCCBP05166 539 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 ZNF8P17098 575 aaPredicted RBP8.4□□□□□ -1.06
LINC00558-201ENST00000569422 HOXB9P17482 250 aaPredicted RBP8.4□□□□□ -1.06
LINC00558-201ENST00000569422 POU3F3P20264 500 aaPredicted RBP8.4□□□□□ -1.06
LINC00558-201ENST00000569422 FUT4P22083 530 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 GSTM2P28161 218 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 TIA1P31483 386 aaKnown RBP eCLIP8.4□□□□□ -1.06
LINC00558-201ENST00000569422 PTGER1P34995 402 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 BMPR1AP36894 532 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 BMXP51813 675 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 VBP1P61758 197 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 ITGADQ13349 1161 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 AQP6Q13520 282 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 POMZP3Q6PJE2 187 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 ADCK2Q7Z695 626 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 RNF130Q86XS8 419 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 OR8J2Q8NGG1 315 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 ZNF420Q8TAQ5 688 aaPredicted RBP8.4□□□□□ -1.06
LINC00558-201ENST00000569422 SPPL3Q8TCT6 385 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 RORBQ92753 470 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 ZNF700Q9H0M5 742 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 ADPRHL2Q9NX46 363 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 USE1Q9NZ43 259 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 MOSPD1Q9UJG1 213 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 DOLKQ9UPQ8 538 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 CORINQ9Y5Q5 1042 aa8.4□□□□□ -1.06
LINC00558-201ENST00000569422 FEZF1A0PJY2 475 aa8.4□□□□□ -1.07
LINC00558-201ENST00000569422 PIPSLA2A3N6 862 aa8.4□□□□□ -1.07
LINC00558-201ENST00000569422 BCAS1O75363 584 aaPredicted RBP8.4□□□□□ -1.07
LINC00558-201ENST00000569422 ARHGEF15O94989 841 aa8.4□□□□□ -1.07
LINC00558-201ENST00000569422 GP2P55259 537 aaKnown RBP8.4□□□□□ -1.07
LINC00558-201ENST00000569422 CDH12P55289 794 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms