RNA–Protein interactions for RNA: ENST00000568870.1

TCF25-223, Transcript of transcription factor 25, human

TSL 2

Gene TCF25, Length 263 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF25-223	ENST00000568870	LINC00032	P0C843	101 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	HSD3B1	P14060	373 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	AGXT	P21549	392 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	HSD3B2	P26439	372 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	CD82	P27701	267 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	SSR2	P43308	183 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	GCGR	P47871	477 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	OR1D4	P47884	311 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	HMGCS1	Q01581	520 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	BTK	Q06187	659 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	ZNF33B	Q06732	778 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	ABHD18	Q0P651	414 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	CUL3	Q13618	768 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	FAM53B	Q14153	422 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	ADPRM	Q3LIE5	342 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	ARHGAP40	Q5TG30	622 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	ERMP1	Q7Z2K6	904 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	HOMEZ	Q8IX15	550 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	ARHGEF39	Q8N4T4	335 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	GBP7	Q8N8V2	638 aa	Predicted RBP	13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	SRFBP1	Q8NEF9	429 aa	Known RBP	13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	PROKR1	Q8TCW9	393 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	MR1	Q95460	341 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	COL26A1	Q96A83	441 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	RGMA	Q96B86	450 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	PPP1R36	Q96LQ0	422 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	ZNF578	Q96N58	590 aa	Predicted RBP	13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	GBP5	Q96PP8	586 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	KCNC2	Q96PR1	638 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	YIPF2	Q9BWQ6	316 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	MRPL1	Q9BYD6	325 aa	Known RBP	13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	SLCO1B3	Q9NPD5	702 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	NMRK1	Q9NWW6	199 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	PSD3	Q9NYI0	1048 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	CDC14A	Q9UNH5	594 aa		13.2	□□□□□ -0.3
TCF25-223	ENST00000568870	TMEM184B	Q9Y519	407 aa	Predicted RBP	13.2	□□□□□ -0.3
TCF25-223	ENST00000568870		A0A088AWK7	358 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	SLC28A1	O00337	649 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	PLPP1	O14494	284 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	POLR3G	O15318	223 aa	Predicted RBP	13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	RGS14	O43566	566 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	RAD1	O60671	282 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	RDH16	O75452	317 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	ZNF10	P21506	573 aa	Predicted RBP	13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	FBL	P22087	321 aa	Known RBP	13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	RORA	P35398	523 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	MDH1	P40925	334 aa	Known RBP	13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	SKP1	P63208	163 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	OLR1	P78380	273 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	DCD	P81605	110 aa	Known RBP	13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	SHC2	P98077	582 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	AP5B1	Q2VPB7	878 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	TBC1D25	Q3MII6	688 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	UGT3A2	Q3SY77	523 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	NKAIN1	Q4KMZ8	207 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	SPDYA	Q5MJ70	313 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	PRMT9	Q6P2P2	845 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	ABHD17C	Q6PCB6	329 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	FAM199X	Q6PEV8	388 aa	Predicted RBP	13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	TIPARP	Q7Z3E1	657 aa	Known RBP	13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	PDSS2	Q86YH6	399 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	DSEL	Q8IZU8	1212 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	NLGN4X	Q8N0W4	816 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	ESX1	Q8N693	406 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	MVB12A	Q96EY5	273 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	C7orf26	Q96N11	449 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	LRFN5	Q96NI6	719 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	SORBS1	Q9BX66	1292 aa	Known RBP	13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	TUBB1	Q9H4B7	451 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	ZNF304	Q9HCX3	659 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	PFDN4	Q9NQP4	134 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	AHSP	Q9NZD4	102 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	VPS29	Q9UBQ0	182 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	HAO1	Q9UJM8	370 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	PPT2	Q9UMR5	302 aa		13.19	□□□□□ -0.3
TCF25-223	ENST00000568870	SERTM1	A2A2V5	107 aa		13.18	□□□□□ -0.3
TCF25-223	ENST00000568870	GALR3	O60755	368 aa	Predicted RBP	13.18	□□□□□ -0.3
TCF25-223	ENST00000568870	NSA2	O95478	260 aa	Known RBP	13.18	□□□□□ -0.3
TCF25-223	ENST00000568870	SMIM10L1	P0DMW3	83 aa		13.18	□□□□□ -0.3
TCF25-223	ENST00000568870	PIM1	P11309	404 aa	Predicted RBP	13.18	□□□□□ -0.3
TCF25-223	ENST00000568870	CERS1	P27544	350 aa		13.18	□□□□□ -0.3
TCF25-223	ENST00000568870	GYS2	P54840	703 aa		13.18	□□□□□ -0.3
TCF25-223	ENST00000568870	MTTP	P55157	894 aa		13.18	□□□□□ -0.3
TCF25-223	ENST00000568870	MAT1A	Q00266	395 aa	Known RBP	13.18	□□□□□ -0.3
TCF25-223	ENST00000568870	NR6A1	Q15406	480 aa		13.18	□□□□□ -0.3
TCF25-223	ENST00000568870	OR4C11	Q6IEV9	310 aa		13.18	□□□□□ -0.3
TCF25-223	ENST00000568870	NIPAL1	Q6NVV3	410 aa		13.18	□□□□□ -0.3
TCF25-223	ENST00000568870	RGS9BP	Q6ZS82	235 aa		13.18	□□□□□ -0.3
TCF25-223	ENST00000568870	TRIM46	Q7Z4K8	759 aa		13.18	□□□□□ -0.3
TCF25-223	ENST00000568870	UBE3D	Q7Z6J8	389 aa		13.18	□□□□□ -0.3
TCF25-223	ENST00000568870	PIWIL2	Q8TC59	973 aa	Known RBP	13.18	□□□□□ -0.3
TCF25-223	ENST00000568870	C19orf60	Q96EN9	201 aa		13.18	□□□□□ -0.3
TCF25-223	ENST00000568870	SMIM10	Q96HG1	83 aa		13.18	□□□□□ -0.3
TCF25-223	ENST00000568870	TBCD	Q9BTW9	1192 aa		13.18	□□□□□ -0.3
TCF25-223	ENST00000568870	NUF2	Q9BZD4	464 aa		13.18	□□□□□ -0.3
TCF25-223	ENST00000568870	SPRY4	Q9C004	299 aa		13.18	□□□□□ -0.3
TCF25-223	ENST00000568870	ROGDI	Q9GZN7	287 aa		13.18	□□□□□ -0.3
TCF25-223	ENST00000568870	LHX9	Q9NQ69	397 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms