RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 PTPRCAPQ14761 206 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 RBBP7Q16576 425 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 C3AR1Q16581 482 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 FLYWCH1Q4VC44 716 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 ZDHHC20Q5W0Z9 365 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 CCDC70Q6NSX1 233 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 TLDC1Q6P9B6 456 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 MEX3BQ6ZN04 569 aaKnown RBP5.35□□□□□ -1.55
CDH13-211ENST00000568770 OVCH2Q7RTZ1 564 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 ZNF571Q7Z3V5 609 aaPredicted RBP5.35□□□□□ -1.55
CDH13-211ENST00000568770 HOOK3Q86VS8 718 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 PQLC3Q8N755 202 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 NIPA2Q8N8Q9 360 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 ZBTB34Q8NCN2 500 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.35□□□□□ -1.55
CDH13-211ENST00000568770 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.35□□□□□ -1.55
CDH13-211ENST00000568770 FKBP10Q96AY3 582 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 RGMAQ96B86 450 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 C1GALT1C1Q96EU7 318 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 LINC00615Q96LM1 132 aaPredicted RBP5.35□□□□□ -1.55
CDH13-211ENST00000568770 OR2A14Q96R47 310 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 ERGIC2Q96RQ1 377 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 NEU1Q99519 415 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 ZNF670Q9BS34 389 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 CCM2Q9BSQ5 444 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 TMEM121Q9BTD3 319 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 SLC25A51Q9H1U9 297 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 TFB2MQ9H5Q4 396 aaKnown RBP5.35□□□□□ -1.55
CDH13-211ENST00000568770 MRM3Q9HC36 420 aaKnown RBP5.35□□□□□ -1.55
CDH13-211ENST00000568770 ZNF160Q9HCG1 818 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 IL17CQ9P0M4 197 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 ABI3Q9P2A4 366 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 PTGFRNQ9P2B2 879 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 CTSFQ9UBX1 484 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 TINAGQ9UJW2 476 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 ANAPC7Q9UJX3 599 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 TCAF1Q9Y4C2 921 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 PCDHGB6Q9Y5F9 930 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 HEY1Q9Y5J3 304 aa5.35□□□□□ -1.55
CDH13-211ENST00000568770 MXRA5Q9NR99 2828 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 A0A0J9YY10 115 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 C17orf113A0A1B0GUU1 675 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 A0A1B0GX78 115 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 LRRC53A6NM62 1247 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 F2RL2O00254 374 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 HPP00738 406 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 PRR35P0CG20 571 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 PIM1P11309 404 aaPredicted RBP5.34□□□□□ -1.55
CDH13-211ENST00000568770 ZNF20P17024 532 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 PDHA2P29803 388 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 SELENOPP49908 381 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 UBE2HP62256 183 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 PMP22Q01453 160 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 GALEQ14376 348 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 RAB39AQ14964 217 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 PDK2Q15119 407 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 HADHQ16836 314 aaKnown RBP5.34□□□□□ -1.55
CDH13-211ENST00000568770 SLC5A12Q1EHB4 618 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 MINDY4Q4G0A6 757 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 BCL7AQ4VC05 210 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 SIRPB2Q5JXA9 342 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 SPDYAQ5MJ70 313 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 SARM1Q6SZW1 724 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 NCCRP1Q6ZVX7 275 aaPredicted RBP5.34□□□□□ -1.55
CDH13-211ENST00000568770 COX15Q7KZN9 410 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 GLT6D1Q7Z4J2 308 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 DNAJC22Q8N4W6 341 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 SLC25A41Q8N5S1 370 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 SIRT6Q8N6T7 355 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 ACBD4Q8NC06 268 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 FLVCR1-AS1Q8TAF5 88 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 CCDC110Q8TBZ0 833 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 ZNF398Q8TD17 642 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 BLOC1S5Q8TDH9 187 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 BRIX1Q8TDN6 353 aaKnown RBP5.34□□□□□ -1.55
CDH13-211ENST00000568770 PSMF1Q92530 271 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 NRGNQ92686 78 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 HAS2Q92819 552 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 C8orf44Q96CB5 159 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 FAF2Q96CS3 445 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 VPS50Q96JG6 964 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 ZNF830Q96NB3 372 aaPredicted RBP5.34□□□□□ -1.55
CDH13-211ENST00000568770 TREX2Q9BQ50 279 aaPredicted RBP5.34□□□□□ -1.55
CDH13-211ENST00000568770 HGH1Q9BTY7 390 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 CHRNA10Q9GZZ6 450 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 THAP2Q9H0W7 228 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 C11orf54Q9H0W9 315 aaPredicted RBP5.34□□□□□ -1.55
CDH13-211ENST00000568770 ISCUQ9H1K1 167 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 SLC26A1Q9H2B4 701 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 OR52A5Q9H2C5 316 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 TRABDQ9H4I3 376 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 GSTO2Q9H4Y5 243 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 MVB12BQ9H7P6 319 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 SMOXQ9NWM0 555 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 SPHK1Q9NYA1 384 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 LIMA1Q9UHB6 759 aaKnown RBP5.34□□□□□ -1.55
CDH13-211ENST00000568770 PLCL2Q9UPR0 1127 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 ICKQ9UPZ9 632 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 MEMO1Q9Y316 297 aa5.34□□□□□ -1.55
CDH13-211ENST00000568770 PKP3Q9Y446 797 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms