RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-231	ENST00000568626	PMEPA1	Q969W9	287 aa		11.41	□□□□□ -0.58
FANCA-231	ENST00000568626	RGMA	Q96B86	450 aa		11.41	□□□□□ -0.58
FANCA-231	ENST00000568626	CLIP3	Q96DZ5	547 aa		11.41	□□□□□ -0.58
FANCA-231	ENST00000568626	C19orf60	Q96EN9	201 aa		11.41	□□□□□ -0.58
FANCA-231	ENST00000568626	QRFPR	Q96P65	431 aa		11.41	□□□□□ -0.58
FANCA-231	ENST00000568626	HBEGF	Q99075	208 aa		11.41	□□□□□ -0.58
FANCA-231	ENST00000568626	SIKE1	Q9BRV8	207 aa		11.41	□□□□□ -0.58
FANCA-231	ENST00000568626	TBCD	Q9BTW9	1192 aa		11.41	□□□□□ -0.58
FANCA-231	ENST00000568626	ACPT	Q9BZG2	426 aa		11.41	□□□□□ -0.58
FANCA-231	ENST00000568626	OR51B5	Q9H339	312 aa		11.41	□□□□□ -0.58
FANCA-231	ENST00000568626	COPS7B	Q9H9Q2	264 aa	Predicted RBP	11.41	□□□□□ -0.58
FANCA-231	ENST00000568626	SLCO1B3	Q9NPD5	702 aa		11.41	□□□□□ -0.58
FANCA-231	ENST00000568626	ASCL3	Q9NQ33	180 aa		11.41	□□□□□ -0.58
FANCA-231	ENST00000568626	FARSB	Q9NSD9	589 aa	Known RBP	11.41	□□□□□ -0.58
FANCA-231	ENST00000568626	STARD5	Q9NSY2	213 aa		11.41	□□□□□ -0.58
FANCA-231	ENST00000568626	ADAM29	Q9UKF5	820 aa		11.41	□□□□□ -0.58
FANCA-231	ENST00000568626	STMND1	H3BQB6	276 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	PIP5K1B	O14986	540 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	GALR3	O60755	368 aa	Predicted RBP	11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	EDF1	O60869	148 aa	Known RBP	11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	VPS4B	O75351	444 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	SKAP2	O75563	359 aa	Predicted RBP	11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	STK17B	O94768	372 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	KLHL18	O94889	574 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	TGDS	O95455	350 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	DLGAP3	O95886	979 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	KLK3	P07288	261 aa	Predicted RBP	11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	ZNF888	P0CJ79	500 aa	Predicted RBP	11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	SMIM10L1	P0DMW3	83 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	PIM1	P11309	404 aa	Predicted RBP	11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	AGXT	P21549	392 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	RORA	P35398	523 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	SSR2	P43308	183 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	MTTP	P55157	894 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	ABHD18	Q0P651	414 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	DSG2	Q14126	1118 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	PDCD2	Q16342	344 aa	Predicted RBP	11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	AP5B1	Q2VPB7	878 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	XKR7	Q5GH72	579 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	FAM47E	Q6ZV65	393 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	MARCH9	Q86YJ5	346 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	DSEL	Q8IZU8	1212 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	METTL4	Q8N3J2	472 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	ADAMTS18	Q8TE60	1221 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	MTFMT	Q96DP5	389 aa	Known RBP	11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	SMIM10	Q96HG1	83 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	PPP3R2	Q96LZ3	170 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	ZNF578	Q96N58	590 aa	Predicted RBP	11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	GBP5	Q96PP8	586 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	F2RL3	Q96RI0	385 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	MACROD1	Q9BQ69	325 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	NPL	Q9BXD5	320 aa	Predicted RBP	11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	FAM117A	Q9C073	453 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	TUBB1	Q9H4B7	451 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	PNPO	Q9NVS9	261 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	MARCO	Q9UEW3	520 aa	Predicted RBP	11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	NDOR1	Q9UHB4	597 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	AK5	Q9Y6K8	562 aa		11.4	□□□□□ -0.58
FANCA-231	ENST00000568626	TRABD2B	A6NFA1	517 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	MEN1	O00255	615 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	PLPP1	O14494	284 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	B3GALT2	O43825	422 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	BRINP1	O60477	761 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	ETHE1	O95571	254 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	ONECUT2	O95948	504 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	NTRK1	P04629	796 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	VIM	P08670	466 aa	Known RBP	11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	CCNYL3	P0C7X3	344 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	ZNF28	P17035	718 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	IL1RN	P18510	177 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	HIST1H1T	P22492	207 aa	Predicted RBP	11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	ALAS2	P22557	587 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	SLC5A2	P31639	672 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	PLA2G16	P53816	162 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	RAB8A	P61006	207 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	DCD	P81605	110 aa	Known RBP	11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	HMGCS1	Q01581	520 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	BTK	Q06187	659 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	ACSM2A	Q08AH3	577 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	NR6A1	Q15406	480 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	DEFB134	Q4QY38	66 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	ARHGAP40	Q5TG30	622 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	ZNF385C	Q66K41	422 aa	Predicted RBP	11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	ACSM2B	Q68CK6	577 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	MTERF4	Q7Z6M4	381 aa	Known RBP	11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	ZCCHC7	Q8N3Z6	543 aa	Known RBP	11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	RNF175	Q8N4F7	328 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	ESX1	Q8N693	406 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	STON2	Q8WXE9	905 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	FKBP10	Q96AY3	582 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	SERINC2	Q96SA4	455 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	AICDA	Q9GZX7	198 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	KLHL31	Q9H511	634 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	MEAF6	Q9HAF1	191 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	C1orf109	Q9NX04	203 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	SIRT5	Q9NXA8	310 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	FOXJ2	Q9P0K8	574 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	DHCR7	Q9UBM7	475 aa	Known RBP	11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	ANGPTL2	Q9UKU9	493 aa		11.39	□□□□□ -0.59
FANCA-231	ENST00000568626	MRPS2	Q9Y399	296 aa	Known RBP	11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms