RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 SMIM10Q96HG1 83 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 SEC16BQ96JE7 1060 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 UBXN10Q96LJ8 280 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 CAPS2Q9BXY5 557 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 SLC6A16Q9GZN6 736 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 PITHD1Q9GZP4 211 aaPredicted RBP4.51□□□□□ -1.69
CLK3-219ENST00000567805 RNF32Q9H0A6 362 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 SPNS1Q9H2V7 528 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 CAB39LQ9H9S4 337 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 CLK4Q9HAZ1 481 aaKnown RBP4.51□□□□□ -1.69
CLK3-219ENST00000567805 LRRC4CQ9HCJ2 640 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 MMP25Q9NPA2 562 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 GPRC5BQ9NZH0 403 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 COPG2Q9UBF2 871 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 NTNG1Q9Y2I2 539 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 MTO1Q9Y2Z2 717 aaKnown RBP4.51□□□□□ -1.69
CLK3-219ENST00000567805 HECTD1Q9ULT8 2610 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 ZGRF1Q86YA3 2104 aa4.51□□□□□ -1.69
CLK3-219ENST00000567805 USP9XQ93008 2570 aaPredicted RBP4.51□□□□□ -1.69
CLK3-219ENST00000567805 LRRK2Q5S007 2527 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 HIVEP3Q5T1R4 2406 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 A0A088AWK7 358 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 IGHV3-20A0A0C4DH32 117 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 CTAGE15A4D2H0 777 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 LRIT2A6NDA9 550 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 OR5H15A6NDH6 313 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 OR2W5A6NFC9 320 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 ANKDD1BA6NHY2 528 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 NCF1BA6NI72 391 aaPredicted RBP4.5□□□□□ -1.69
CLK3-219ENST00000567805 A8MUI8 341 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 NCF1CA8MVU1 366 aaPredicted RBP4.5□□□□□ -1.69
CLK3-219ENST00000567805 PSMD12O00232 456 aaPredicted RBP4.5□□□□□ -1.69
CLK3-219ENST00000567805 E2F3O00716 465 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 CDK2AP1O14519 115 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 CLGNO14967 610 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 PHGDHO43175 533 aaKnown RBP4.5□□□□□ -1.69
CLK3-219ENST00000567805 CHST10O43529 356 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 PRMT3O60678 531 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 PRAMEF2O60811 474 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 CLEC3AO75596 197 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 CDC123O75794 336 aaPredicted RBP4.5□□□□□ -1.69
CLK3-219ENST00000567805 WDPCPO95876 746 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 S100BP04271 92 aaPredicted RBP4.5□□□□□ -1.69
CLK3-219ENST00000567805 C1GALT1C1LP0DN25 315 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 RNH1P13489 461 aaKnown RBP4.5□□□□□ -1.69
CLK3-219ENST00000567805 NCF1P14598 390 aaPredicted RBP4.5□□□□□ -1.69
CLK3-219ENST00000567805 CD1DP15813 335 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 ZNF10P21506 573 aaPredicted RBP4.5□□□□□ -1.69
CLK3-219ENST00000567805 CRABP2P29373 138 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 GDF5P43026 501 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 OR4D2P58180 307 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 SLC26A5P58743 744 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 STXBP1P61764 594 aaKnown RBP4.5□□□□□ -1.69
CLK3-219ENST00000567805 ZNF33BQ06732 778 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 ACTN3Q08043 901 aaPredicted RBP4.5□□□□□ -1.69
CLK3-219ENST00000567805 HYAL2Q12891 473 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 SLBPQ14493 270 aaKnown RBP eCLIP4.5□□□□□ -1.69
CLK3-219ENST00000567805 SLMAPQ14BN4 828 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 RBBP5Q15291 538 aaKnown RBP4.5□□□□□ -1.69
CLK3-219ENST00000567805 OR4D1Q15615 310 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 MEP1AQ16819 746 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 SFT2D3Q587I9 215 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 TOR1AIP1Q5JTV8 583 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 SULT1C3Q6IMI6 304 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 C8orf74Q6P047 294 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 PAPD4Q6PIY7 484 aaKnown RBP4.5□□□□□ -1.69
CLK3-219ENST00000567805 ZDHHC24Q6UX98 284 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 TMIGD1Q6UXZ0 262 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 SLCO4C1Q6ZQN7 724 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 CEP128Q6ZU80 1094 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 RAPH1Q70E73 1250 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 CCDC91Q7Z6B0 441 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 TBC1D1Q86TI0 1168 aaPredicted RBP4.5□□□□□ -1.69
CLK3-219ENST00000567805 CTAGE6Q86UF2 777 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 CCDC25Q86WR0 208 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.5□□□□□ -1.69
CLK3-219ENST00000567805 SHISA5Q8N114 240 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 KRT78Q8N1N4 520 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 SPATA6LQ8N4H0 392 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 PPM1NQ8N819 430 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 BCORP1Q8N888 145 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 OR1N1Q8NGS0 311 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 SUN3Q8TAQ9 357 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 FBF1Q8TES7 1133 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 CREB3L4Q8TEY5 395 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 TSLPQ969D9 159 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 GAL3ST3Q96A11 431 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 KIAA1191Q96A73 305 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 PTCD3Q96EY7 689 aaKnown RBP4.5□□□□□ -1.69
CLK3-219ENST00000567805 ZNF354BQ96LW1 612 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 MAGEB10Q96LZ2 347 aaPredicted RBP4.5□□□□□ -1.69
CLK3-219ENST00000567805 C5orf34Q96MH7 638 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 LPAR4Q99677 370 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 SLX1AQ9BQ83 275 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 TMEM79Q9BSE2 394 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 NPLQ9BXD5 320 aaPredicted RBP4.5□□□□□ -1.69
CLK3-219ENST00000567805 RBCK1Q9BYM8 510 aa4.5□□□□□ -1.69
CLK3-219ENST00000567805 UNKQ9C0B0 810 aaKnown RBP4.5□□□□□ -1.69
CLK3-219ENST00000567805 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.5□□□□□ -1.69
CLK3-219ENST00000567805 EHD1Q9H4M9 534 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms