RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 ACACAQ13085 2346 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 LRIT2A6NDA9 550 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 C4orf51C9J302 202 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 FOXE1O00358 373 aaPredicted RBP10.9□□□□□ -0.66
KARS-207ENST00000566560 KLF11O14901 512 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 ERI3O43414 337 aaKnown RBP10.9□□□□□ -0.66
KARS-207ENST00000566560 SNNO75324 88 aaPredicted RBP10.9□□□□□ -0.66
KARS-207ENST00000566560 ULK1O75385 1050 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 SKAP2O75563 359 aaPredicted RBP10.9□□□□□ -0.66
KARS-207ENST00000566560 MED26O95402 600 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 TBX6O95947 436 aaPredicted RBP10.9□□□□□ -0.66
KARS-207ENST00000566560 TGFB1P01137 390 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 PDYNP01213 254 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 ALAS2P22557 587 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 RORAP35398 523 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 RAP1GDS1P52306 607 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 RAB8AP61006 207 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 TGM3Q08188 693 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 CSTF3Q12996 717 aaKnown RBP10.9□□□□□ -0.66
KARS-207ENST00000566560 HERC3Q15034 1050 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 MANEAQ5SRI9 462 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 KHDRBS2Q5VWX1 349 aaKnown RBP10.9□□□□□ -0.66
KARS-207ENST00000566560 TRIM40Q6P9F5 258 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 ATG14Q6ZNE5 492 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 ZFAND4Q86XD8 727 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 CCDC116Q8IYX3 515 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 KIRREL3Q8IZU9 778 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 AFAP1L2Q8N4X5 818 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 DTWD1Q8N5C7 304 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 ZNF781Q8N8C0 355 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 OR2L5Q8NG80 312 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 TWIST2Q8WVJ9 160 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 ZNF75CPQ92670 426 aaPredicted RBP10.9□□□□□ -0.66
KARS-207ENST00000566560 MTFMTQ96DP5 389 aaKnown RBP10.9□□□□□ -0.66
KARS-207ENST00000566560 MVB12AQ96EY5 273 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 CMTM7Q96FZ5 175 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 GBP5Q96PP8 586 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 REXO4Q9GZR2 422 aaKnown RBP10.9□□□□□ -0.66
KARS-207ENST00000566560 AICDAQ9GZX7 198 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 OR51B5Q9H339 312 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 ZNF395Q9H8N7 513 aaPredicted RBP10.9□□□□□ -0.66
KARS-207ENST00000566560 ANKHQ9HCJ1 492 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 FARSBQ9NSD9 589 aaKnown RBP10.9□□□□□ -0.66
KARS-207ENST00000566560 THAP1Q9NVV9 213 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 ACSL6Q9UKU0 697 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 PPT2Q9UMR5 302 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 RAP2CQ9Y3L5 183 aa10.9□□□□□ -0.66
KARS-207ENST00000566560 A0A088AWK7 358 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 A0A0A6YYC8 382 aaPredicted RBP10.89□□□□□ -0.67
KARS-207ENST00000566560 A0A0G2JN53 185 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 TEX51A0A1B0GUA7 166 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 ZNF860A6NHJ4 632 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.89□□□□□ -0.67
KARS-207ENST00000566560 I3L1I5 382 aaPredicted RBP10.89□□□□□ -0.67
KARS-207ENST00000566560 SAP18O00422 153 aaKnown RBP10.89□□□□□ -0.67
KARS-207ENST00000566560 RAD1O60671 282 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 KLHL18O94889 574 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 ETHE1O95571 254 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 KLK3P07288 261 aaPredicted RBP10.89□□□□□ -0.67
KARS-207ENST00000566560 HSD3B1P14060 373 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 ALOX12P18054 663 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 ZNF10P21506 573 aaPredicted RBP10.89□□□□□ -0.67
KARS-207ENST00000566560 HSD3B2P26439 372 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 SERPINB3P29508 390 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 AVPR1BP47901 424 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 PLA2G16P53816 162 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 PCBP4P57723 403 aaKnown RBP10.89□□□□□ -0.67
KARS-207ENST00000566560 SNRPNP63162 240 aaKnown RBP10.89□□□□□ -0.67
KARS-207ENST00000566560 SKP1P63208 163 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 OCRLQ01968 901 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 ZNF33BQ06732 778 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 FAM53BQ14153 422 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 MAP7Q14244 749 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 SLC9A5Q14940 896 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 ABRAXAS2Q15018 415 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 IMPG1Q17R60 797 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 ADPRMQ3LIE5 342 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 DEFB134Q4QY38 66 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 TMEM35AQ53FP2 167 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 ARHGAP40Q5TG30 622 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 SCIMPQ6UWF3 145 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 C6orf15Q6UXA7 325 aaPredicted RBP10.89□□□□□ -0.67
KARS-207ENST00000566560 CHSY3Q70JA7 882 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 PRSS41Q7RTY9 318 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 DSELQ8IZU8 1212 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 NLGN4XQ8N0W4 816 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 CLYBLQ8N0X4 340 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 ESX1Q8N693 406 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 SLC38A9Q8NBW4 561 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 NLGN4YQ8NFZ3 816 aaPredicted RBP10.89□□□□□ -0.67
KARS-207ENST00000566560 UTP15Q8TED0 518 aaKnown RBP10.89□□□□□ -0.67
KARS-207ENST00000566560 CKAP2Q8WWK9 683 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 GATA6Q92908 595 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 MR1Q95460 341 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 MS4A6EQ96DS6 147 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 MAGEB18Q96M61 343 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 LRFN5Q96NI6 719 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 KCNC2Q96PR1 638 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 F2RL3Q96RI0 385 aa10.89□□□□□ -0.67
KARS-207ENST00000566560 SERPINI1Q99574 410 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms