RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 A0A1W2PPE2 198 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 A0A1W2PR64 198 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 MEX3AA1L020 520 aaKnown RBP3.56□□□□□ -1.84
CHD9-212ENST00000564641 CCDC69A6NI79 296 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 TSPY2A6NKD2 308 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 A8MV72 311 aaPredicted RBP3.56□□□□□ -1.84
CHD9-212ENST00000564641 ANKRD65E5RJM6 399 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 SOCS3O14543 225 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 KINO60870 393 aaKnown RBP3.56□□□□□ -1.84
CHD9-212ENST00000564641 CLDN1O95832 211 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 ABCB1P08183 1280 aaPredicted RBP3.56□□□□□ -1.84
CHD9-212ENST00000564641 TSPY3P0CV98 308 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 TSPY8P0CW00 308 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 PRLRP16471 622 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 IFNAR1P17181 557 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 TRIM21P19474 475 aaKnown RBP3.56□□□□□ -1.84
CHD9-212ENST00000564641 PAX7P23759 505 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 PRPHP41219 470 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 UBXN2AP68543 259 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 RBP5P82980 135 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 TSPY1Q01534 308 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 BFSP1Q12934 665 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 NFATC2Q13469 925 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 SNTB1Q13884 538 aaKnown RBP3.56□□□□□ -1.84
CHD9-212ENST00000564641 E2F5Q15329 346 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 LYSMD4Q5XG99 296 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 CHST3Q7LGC8 479 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 IQCA1Q86XH1 822 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 THNSL1Q8IYQ7 743 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 KIRREL3Q8IZU9 778 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 Q8N377 158 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 LINC00612Q8N6U2 182 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 PI4KAP1Q8N8J0 262 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 KBTBD8Q8NFY9 601 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 OLIG1Q8TAK6 271 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 TMCO6Q96DC7 493 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 CABS1Q96KC9 395 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 CEP295NLQ96MC4 621 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 DGAT2Q96PD7 388 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 OR6C1Q96RD1 312 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 FNBP1Q96RU3 617 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 BTBD10Q9BSF8 475 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 CARD6Q9BX69 1037 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 RAB11FIP5Q9BXF6 653 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 CPVLQ9H3G5 476 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 HRH4Q9H3N8 390 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 A4GALTQ9NPC4 353 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 ZNF701Q9NV72 531 aaPredicted RBP3.56□□□□□ -1.84
CHD9-212ENST00000564641 PAG1Q9NWQ8 432 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 TAS2R14Q9NYV8 317 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 NUDT4Q9NZJ9 180 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 ODF2LQ9ULJ1 636 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 PPIEQ9UNP9 301 aaKnown RBP3.56□□□□□ -1.84
CHD9-212ENST00000564641 WBP11Q9Y2W2 641 aaKnown RBP3.56□□□□□ -1.84
CHD9-212ENST00000564641 TRIM17Q9Y577 477 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 NME7Q9Y5B8 376 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 TRPV2Q9Y5S1 764 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 ECM29Q5VYK3 1845 aa3.56□□□□□ -1.84
CHD9-212ENST00000564641 PHLPP2Q6ZVD8 1323 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 IGHV3OR16-10A0A075B7F0 116 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 LOC102723996A0A087X1L8 192 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 A0A1W2PNU3 283 aaPredicted RBP3.55□□□□□ -1.84
CHD9-212ENST00000564641 LNP1A1A4G5 178 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 GOLGA6L4A6NEF3 574 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 LRRC72A6NJI9 287 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 C15orf61A6NNL5 157 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 USP27XA6NNY8 438 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 ADAMDEC1O15204 470 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 AVILO75366 819 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 KIAA0754O94854 1291 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 CCDC175P0C221 793 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 ZSCAN5DPP0CG00 497 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 IGHV4-31P0DP07 118 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 EZRP15311 586 aaKnown RBP3.55□□□□□ -1.84
CHD9-212ENST00000564641 GCKP35557 465 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 MMP12P39900 470 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 PAX9P55771 341 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 ALCAMQ13740 583 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 TWISTNBQ3B726 338 aaPredicted RBP3.55□□□□□ -1.84
CHD9-212ENST00000564641 FAM98BQ52LJ0 330 aaKnown RBP3.55□□□□□ -1.84
CHD9-212ENST00000564641 SLC25A30Q5SVS4 291 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 ZNF343Q6P1L6 599 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 RBPMS2Q6ZRY4 209 aaKnown RBP3.55□□□□□ -1.84
CHD9-212ENST00000564641 C15orf52Q6ZUT6 534 aaKnown RBP3.55□□□□□ -1.84
CHD9-212ENST00000564641 GPRIN3Q6ZVF9 776 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 PTAR1Q7Z6K3 402 aaPredicted RBP3.55□□□□□ -1.84
CHD9-212ENST00000564641 LUZP1Q86V48 1076 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 CCDC50Q8IVM0 306 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 SLC39A11Q8N1S5 342 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 TRIML1Q8N9V2 468 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 XXYLT1Q8NBI6 393 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 CCDC26Q8TAB7 109 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 AFAP1L1Q8TED9 768 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 PTPMT1Q8WUK0 201 aaPredicted RBP3.55□□□□□ -1.84
CHD9-212ENST00000564641 PHLDA1Q8WV24 401 aaPredicted RBP3.55□□□□□ -1.84
CHD9-212ENST00000564641 ZFAND2BQ8WV99 257 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 TCP11Q8WWU5 503 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 AZIN2Q96A70 460 aa3.55□□□□□ -1.84
CHD9-212ENST00000564641 RMDN1Q96DB5 314 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms