RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 MAU2Q9Y6X3 613 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 SAP18O00422 153 aaKnown RBP11.83□□□□□ -0.52
KARS-204ENST00000564578 TERTO14746 1132 aaKnown RBP11.83□□□□□ -0.52
KARS-204ENST00000564578 KLF11O14901 512 aa11.83□□□□□ -0.52
KARS-204ENST00000564578 AZIN1O14977 448 aa11.83□□□□□ -0.52
KARS-204ENST00000564578 ERI3O43414 337 aaKnown RBP11.83□□□□□ -0.52
KARS-204ENST00000564578 RAD1O60671 282 aa11.83□□□□□ -0.52
KARS-204ENST00000564578 ULK1O75385 1050 aa11.83□□□□□ -0.52
KARS-204ENST00000564578 UROSP10746 265 aa11.83□□□□□ -0.52
KARS-204ENST00000564578 NEFHP12036 1026 aa11.83□□□□□ -0.52
KARS-204ENST00000564578 ALOX12P18054 663 aa11.83□□□□□ -0.52
KARS-204ENST00000564578 PTX3P26022 381 aaPredicted RBP11.83□□□□□ -0.52
KARS-204ENST00000564578 HMOX2P30519 316 aa11.83□□□□□ -0.52
KARS-204ENST00000564578 PLA2G16P53816 162 aa11.83□□□□□ -0.52
KARS-204ENST00000564578 STXBP1P61764 594 aaKnown RBP11.83□□□□□ -0.52
KARS-204ENST00000564578 MAP7Q14244 749 aa11.83□□□□□ -0.52
KARS-204ENST00000564578 NKAIN1Q4KMZ8 207 aa11.83□□□□□ -0.52
KARS-204ENST00000564578 SH2D4BQ5SQS7 431 aa11.83□□□□□ -0.52
KARS-204ENST00000564578 KANK2Q63ZY3 851 aa11.83□□□□□ -0.52
KARS-204ENST00000564578 ABHD17CQ6PCB6 329 aa11.83□□□□□ -0.52
KARS-204ENST00000564578 SCIMPQ6UWF3 145 aa11.83□□□□□ -0.52
KARS-204ENST00000564578 UNQ6494/PRO21346Q6UXR6 183 aa11.83□□□□□ -0.52
KARS-204ENST00000564578 COX15Q7KZN9 410 aa11.83□□□□□ -0.52
KARS-204ENST00000564578 ZNF781Q8N8C0 355 aa11.83□□□□□ -0.52
KARS-204ENST00000564578 OR2L5Q8NG80 312 aa11.83□□□□□ -0.52
KARS-204ENST00000564578 SNIP1Q8TAD8 396 aaKnown RBP11.83□□□□□ -0.52
KARS-204ENST00000564578 RAB3IL1Q8TBN0 382 aa11.83□□□□□ -0.52
KARS-204ENST00000564578 SELENOMQ8WWX9 145 aa11.83□□□□□ -0.52
KARS-204ENST00000564578 ZNF717Q9BY31 904 aaPredicted RBP11.83□□□□□ -0.52
KARS-204ENST00000564578 CHST8Q9H2A9 424 aa11.83□□□□□ -0.52
KARS-204ENST00000564578 PRDM7Q9NQW5 492 aa11.83□□□□□ -0.52
KARS-204ENST00000564578 NDOR1Q9UHB4 597 aa11.83□□□□□ -0.52
KARS-204ENST00000564578 HAO1Q9UJM8 370 aa11.83□□□□□ -0.52
KARS-204ENST00000564578 NAALAD2Q9Y3Q0 740 aa11.83□□□□□ -0.52
KARS-204ENST00000564578 PTGDR2Q9Y5Y4 395 aa11.83□□□□□ -0.52
KARS-204ENST00000564578 A0A0G2JN53 185 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 SGK494L7N484 410 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 TAF4O00268 1085 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 PLPP1O14494 284 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 GALR3O60755 368 aaPredicted RBP11.82□□□□□ -0.52
KARS-204ENST00000564578 NSA2O95478 260 aaKnown RBP11.82□□□□□ -0.52
KARS-204ENST00000564578 HSPA4LO95757 839 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 KRT6AP02538 564 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 KRT6BP04259 564 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 KLK3P07288 261 aaPredicted RBP11.82□□□□□ -0.52
KARS-204ENST00000564578 LIPCP11150 499 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 F8A1P23610 371 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 STAT5AP42229 794 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 KRT6CP48668 564 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 DCDP81605 110 aaKnown RBP11.82□□□□□ -0.52
KARS-204ENST00000564578 OCRLQ01968 901 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 CLN3Q13286 438 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 CUL3Q13618 768 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 SLC9A5Q14940 896 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 HERC3Q15034 1050 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 NDUFA9Q16795 377 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 TMEM35AQ53FP2 167 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 PRMT9Q6P2P2 845 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 CHSY3Q70JA7 882 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 TRIM46Q7Z4K8 759 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 TMEM151BQ8IW70 566 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 CLYBLQ8N0X4 340 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 ESX1Q8N693 406 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 GAL3ST3Q96A11 431 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 C17orf62Q9BQA9 187 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 ACPTQ9BZG2 426 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 BRF2Q9HAW0 419 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 THAP1Q9NVV9 213 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 CCL27Q9Y4X3 112 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 MGAQ8IWI9 3026 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 DSPP15924 2871 aaKnown RBP11.82□□□□□ -0.52
KARS-204ENST00000564578 LOC101059948A0A1B0GTJ6 334 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 SERTM1A2A2V5 107 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 URADA6NGE7 173 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 H0YIG0 161 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 RTCAO00442 366 aaKnown RBP11.82□□□□□ -0.52
KARS-204ENST00000564578 CNOT3O75175 753 aaKnown RBP11.82□□□□□ -0.52
KARS-204ENST00000564578 KLHL18O94889 574 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 ATXN8OSP0DMR3 200 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 PCBP4P57723 403 aaKnown RBP11.82□□□□□ -0.52
KARS-204ENST00000564578 FOXL2P58012 376 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 BTN3A2P78410 334 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 ZNF33BQ06732 778 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 TBL3Q12788 808 aaKnown RBP11.82□□□□□ -0.52
KARS-204ENST00000564578 SYT16Q17RD7 645 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 FAM198BQ6UWH4 519 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 ZNF793Q6ZN11 406 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 ABHD13Q7L211 337 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 CACNA2D3Q8IZS8 1091 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 OR5T3Q8NGG3 340 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 MR1Q95460 341 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 MMABQ96EY8 250 aaPredicted RBP11.82□□□□□ -0.52
KARS-204ENST00000564578 QRFPRQ96P65 431 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 DPH2Q9BQC3 489 aaPredicted RBP11.82□□□□□ -0.52
KARS-204ENST00000564578 SORBS1Q9BX66 1292 aaKnown RBP11.82□□□□□ -0.52
KARS-204ENST00000564578 MRPL1Q9BYD6 325 aaKnown RBP11.82□□□□□ -0.52
KARS-204ENST00000564578 ANKHQ9HCJ1 492 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 ZNF304Q9HCX3 659 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 FIS1Q9Y3D6 152 aa11.82□□□□□ -0.52
KARS-204ENST00000564578 RAP2CQ9Y3L5 183 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms