RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 AFAP1L2Q8N4X5 818 aa12.91□□□□□ -0.34
CNOT1-206ENST00000564557 EIF1ADQ8N9N8 165 aaKnown RBP12.91□□□□□ -0.34
CNOT1-206ENST00000564557 CREB3L4Q8TEY5 395 aa12.91□□□□□ -0.34
CNOT1-206ENST00000564557 UBTD2Q8WUN7 234 aa12.91□□□□□ -0.34
CNOT1-206ENST00000564557 DCAKDQ8WVC6 231 aa12.91□□□□□ -0.34
CNOT1-206ENST00000564557 ATP6V1E2Q96A05 226 aa12.91□□□□□ -0.34
CNOT1-206ENST00000564557 GAL3ST3Q96A11 431 aa12.91□□□□□ -0.34
CNOT1-206ENST00000564557 TBC1D20Q96BZ9 403 aa12.91□□□□□ -0.34
CNOT1-206ENST00000564557 SLC6A16Q9GZN6 736 aa12.91□□□□□ -0.34
CNOT1-206ENST00000564557 VN1R1Q9GZP7 353 aa12.91□□□□□ -0.34
CNOT1-206ENST00000564557 RHBGQ9H310 441 aa12.91□□□□□ -0.34
CNOT1-206ENST00000564557 EPS8L2Q9H6S3 715 aa12.91□□□□□ -0.34
CNOT1-206ENST00000564557 ZNF552Q9H707 407 aaPredicted RBP12.91□□□□□ -0.34
CNOT1-206ENST00000564557 COPS7BQ9H9Q2 264 aaPredicted RBP12.91□□□□□ -0.34
CNOT1-206ENST00000564557 SMG1Q96Q15 3661 aaKnown RBP12.91□□□□□ -0.34
CNOT1-206ENST00000564557 TNRC6AQ8NDV7 1962 aaKnown RBP12.9□□□□□ -0.34
CNOT1-206ENST00000564557 ERI3O43414 337 aaKnown RBP12.9□□□□□ -0.34
CNOT1-206ENST00000564557 CDC123O75794 336 aaPredicted RBP12.9□□□□□ -0.34
CNOT1-206ENST00000564557 FHP07954 510 aa12.9□□□□□ -0.34
CNOT1-206ENST00000564557 FAM153BP0C7A2 387 aa12.9□□□□□ -0.34
CNOT1-206ENST00000564557 COX6A1P12074 109 aa12.9□□□□□ -0.34
CNOT1-206ENST00000564557 RNH1P13489 461 aaKnown RBP12.9□□□□□ -0.34
CNOT1-206ENST00000564557 PHEXP78562 749 aa12.9□□□□□ -0.34
CNOT1-206ENST00000564557 SETDB1Q15047 1291 aa12.9□□□□□ -0.34
CNOT1-206ENST00000564557 NSDHLQ15738 373 aa12.9□□□□□ -0.34
CNOT1-206ENST00000564557 TBCCQ15814 346 aa12.9□□□□□ -0.34
CNOT1-206ENST00000564557 FAM153CQ494X1 144 aa12.9□□□□□ -0.34
CNOT1-206ENST00000564557 NADK2Q4G0N4 442 aa12.9□□□□□ -0.34
CNOT1-206ENST00000564557 MED27Q6P2C8 311 aa12.9□□□□□ -0.34
CNOT1-206ENST00000564557 TMEM205Q6UW68 189 aa12.9□□□□□ -0.34
CNOT1-206ENST00000564557 CPEB2Q7Z5Q1 589 aaKnown RBP12.9□□□□□ -0.34
CNOT1-206ENST00000564557 PACS2Q86VP3 889 aa12.9□□□□□ -0.34
CNOT1-206ENST00000564557 SRFBP1Q8NEF9 429 aaKnown RBP12.9□□□□□ -0.34
CNOT1-206ENST00000564557 ARMC2Q8NEN0 867 aa12.9□□□□□ -0.34
CNOT1-206ENST00000564557 OR5T3Q8NGG3 340 aa12.9□□□□□ -0.34
CNOT1-206ENST00000564557 UBLCP1Q8WVY7 318 aaPredicted RBP12.9□□□□□ -0.34
CNOT1-206ENST00000564557 WDR34Q96EX3 536 aa12.9□□□□□ -0.34
CNOT1-206ENST00000564557 CENPKQ9BS16 269 aa12.9□□□□□ -0.34
CNOT1-206ENST00000564557 TUBB6Q9BUF5 446 aa12.9□□□□□ -0.34
CNOT1-206ENST00000564557 RBCK1Q9BYM8 510 aa12.9□□□□□ -0.34
CNOT1-206ENST00000564557 REXO4Q9GZR2 422 aaKnown RBP12.9□□□□□ -0.34
CNOT1-206ENST00000564557 EPN3Q9H201 632 aa12.9□□□□□ -0.34
CNOT1-206ENST00000564557 KLHL31Q9H511 634 aa12.9□□□□□ -0.34
CNOT1-206ENST00000564557 ACTR8Q9H981 624 aa12.9□□□□□ -0.34
CNOT1-206ENST00000564557 MAP10Q9P2G4 905 aa12.9□□□□□ -0.34
CNOT1-206ENST00000564557 IGHV1-45A0A0A0MS14 117 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 LRIT2A6NDA9 550 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 B3GALT2O43825 422 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 B4GALT2O60909 372 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 B3GALT4O96024 378 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 MTHFD2P13995 350 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 SERPINB1P30740 379 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 MAGEA12P43365 314 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 CSRP3P50461 194 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 PLA2G16P53816 162 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 SNRPNP63162 240 aaKnown RBP12.89□□□□□ -0.35
CNOT1-206ENST00000564557 KCNC4Q03721 635 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 GTF2H2Q13888 395 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 RCN2Q14257 317 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 ABRAXAS2Q15018 415 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 TECRLQ5HYJ1 363 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 GTF2H2CQ6P1K8 395 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 RIPOR1Q6ZS17 1223 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 CHSY3Q70JA7 882 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 GSPT2Q8IYD1 628 aaKnown RBP12.89□□□□□ -0.35
CNOT1-206ENST00000564557 PLD6Q8N2A8 252 aaKnown RBP12.89□□□□□ -0.35
CNOT1-206ENST00000564557 LRRN4CLQ8ND94 238 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 PLPP5Q8NEB5 264 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 OR2L5Q8NG80 312 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.89□□□□□ -0.353e-9■□□□□ 10.6
CNOT1-206ENST00000564557 ISL2Q96A47 359 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 REPS1Q96D71 796 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 PHF21BQ96EK2 531 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 PTCHD1Q96NR3 888 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 GPR78Q96P69 363 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 MRPL57Q9BQC6 102 aaKnown RBP12.89□□□□□ -0.35
CNOT1-206ENST00000564557 ROGDIQ9GZN7 287 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 ILKAPQ9H0C8 392 aaPredicted RBP12.89□□□□□ -0.35
CNOT1-206ENST00000564557 ZNF700Q9H0M5 742 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 PSMC3IPQ9P2W1 217 aaPredicted RBP12.89□□□□□ -0.35
CNOT1-206ENST00000564557 COPG2Q9UBF2 871 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 XPR1Q9UBH6 696 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 ADGRE2Q9UHX3 823 aa12.89□□□□□ -0.35
CNOT1-206ENST00000564557 LOC102723996A0A087X1L8 192 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 A0A0G2JN53 185 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 PYCARD-AS1I3L0S3 204 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 CLDN4O14493 209 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 PRMT3O60678 531 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 WISP1O95388 367 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 SERPINA7P05543 415 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 PRR35P0CG20 571 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 SMIM10L1P0DMW3 83 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 TAC1P20366 129 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 CASP2P42575 452 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 MLLT10P55197 1068 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 OR4D2P58180 307 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 HYAL2Q12891 473 aa12.88□□□□□ -0.35
CNOT1-206ENST00000564557 DDX39BQ13838 428 aaKnown RBP12.88□□□□□ -0.35
CNOT1-206ENST00000564557 NAA30Q147X3 362 aaPredicted RBP12.88□□□□□ -0.35
CNOT1-206ENST00000564557 PCBP2Q15366 365 aaKnown RBP eCLIP12.88□□□□□ -0.359e-8■■■■□ 22.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms