RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 B3GALT4O96024 378 aa13.18□□□□□ -0.3
CDR2-204ENST00000564542 SERPIND1P05546 499 aa13.18□□□□□ -0.3
CDR2-204ENST00000564542 MAOAP21397 527 aa13.18□□□□□ -0.3
CDR2-204ENST00000564542 CXCR5P32302 372 aa13.18□□□□□ -0.3
CDR2-204ENST00000564542 AHRP35869 848 aa13.18□□□□□ -0.3
CDR2-204ENST00000564542 AP1S2P56377 157 aa13.18□□□□□ -0.3
CDR2-204ENST00000564542 PAQR3Q6TCH7 311 aa13.18□□□□□ -0.3
CDR2-204ENST00000564542 ZNF662Q6ZS27 426 aa13.18□□□□□ -0.3
CDR2-204ENST00000564542 MARVELD2Q8N4S9 558 aa13.18□□□□□ -0.3
CDR2-204ENST00000564542 NFAM1Q8NET5 270 aaPredicted RBP13.18□□□□□ -0.3
CDR2-204ENST00000564542 TRIM58Q8NG06 486 aa13.18□□□□□ -0.3
CDR2-204ENST00000564542 PYCR2Q96C36 320 aa13.18□□□□□ -0.3
CDR2-204ENST00000564542 LINGO1Q96FE5 620 aa13.18□□□□□ -0.3
CDR2-204ENST00000564542 SIGLEC10Q96LC7 697 aa13.18□□□□□ -0.3
CDR2-204ENST00000564542 OR4K3Q96R72 315 aa13.18□□□□□ -0.3
CDR2-204ENST00000564542 DEFB126Q9BYW3 111 aa13.18□□□□□ -0.3
CDR2-204ENST00000564542 CLK4Q9HAZ1 481 aaKnown RBP13.18□□□□□ -0.3
CDR2-204ENST00000564542 LZTFL1Q9NQ48 299 aa13.18□□□□□ -0.3
CDR2-204ENST00000564542 PRDM9Q9NQV7 894 aa13.18□□□□□ -0.3
CDR2-204ENST00000564542 IARS2Q9NSE4 1012 aaKnown RBP13.18□□□□□ -0.3
CDR2-204ENST00000564542 ARL15Q9NXU5 204 aa13.18□□□□□ -0.3
CDR2-204ENST00000564542 ZFP69BQ9UJL9 534 aa13.18□□□□□ -0.3
CDR2-204ENST00000564542 GOLGA6L6A8MZA4 724 aa13.17□□□□□ -0.3
CDR2-204ENST00000564542 TPOP07202 933 aa13.17□□□□□ -0.3
CDR2-204ENST00000564542 TFEBP19484 476 aa13.17□□□□□ -0.3
CDR2-204ENST00000564542 SCTRP47872 440 aa13.17□□□□□ -0.3
CDR2-204ENST00000564542 CDKN2DP55273 166 aa13.17□□□□□ -0.3
CDR2-204ENST00000564542 BTG2P78543 158 aa13.17□□□□□ -0.3
CDR2-204ENST00000564542 CMPK2Q5EBM0 449 aa13.17□□□□□ -0.3
CDR2-204ENST00000564542 CATSPEREQ5SY80 951 aa13.17□□□□□ -0.3
CDR2-204ENST00000564542 RBM20Q5T481 1227 aaKnown RBP13.17□□□□□ -0.3
CDR2-204ENST00000564542 SULF2Q8IWU5 870 aa13.17□□□□□ -0.3
CDR2-204ENST00000564542 CYP4Z2PQ8N1L4 340 aa13.17□□□□□ -0.3
CDR2-204ENST00000564542 ZFP62Q8NB50 900 aaPredicted RBP13.17□□□□□ -0.3
CDR2-204ENST00000564542 ARMC2Q8NEN0 867 aa13.17□□□□□ -0.3
CDR2-204ENST00000564542 C16orf52Q8NHV5 167 aa13.17□□□□□ -0.3
CDR2-204ENST00000564542 UTP15Q8TED0 518 aaKnown RBP13.17□□□□□ -0.3
CDR2-204ENST00000564542 ASB5Q8WWX0 329 aa13.17□□□□□ -0.3
CDR2-204ENST00000564542 SLC5A11Q8WWX8 675 aa13.17□□□□□ -0.3
CDR2-204ENST00000564542 ATL1Q8WXF7 558 aa13.17□□□□□ -0.3
CDR2-204ENST00000564542 NEIL2Q969S2 332 aa13.17□□□□□ -0.3
CDR2-204ENST00000564542 SLC6A16Q9GZN6 736 aa13.17□□□□□ -0.3
CDR2-204ENST00000564542 SPNS1Q9H2V7 528 aa13.17□□□□□ -0.3
CDR2-204ENST00000564542 NEU2Q9Y3R4 380 aa13.17□□□□□ -0.3
CDR2-204ENST00000564542 URADA6NGE7 173 aa13.16□□□□□ -0.3
CDR2-204ENST00000564542 FOXO6A8MYZ6 492 aa13.16□□□□□ -0.3
CDR2-204ENST00000564542 PSMD12O00232 456 aaPredicted RBP13.16□□□□□ -0.3
CDR2-204ENST00000564542 PEX1O43933 1283 aa13.16□□□□□ -0.3
CDR2-204ENST00000564542 HS6ST1O60243 411 aa13.16□□□□□ -0.3
CDR2-204ENST00000564542 CDC40O60508 579 aaKnown RBP eCLIP13.16□□□□□ -0.3
CDR2-204ENST00000564542 RNH1P13489 461 aaKnown RBP13.16□□□□□ -0.3
CDR2-204ENST00000564542 PGAM1P18669 254 aa13.16□□□□□ -0.3
CDR2-204ENST00000564542 CHRNB4P30926 498 aa13.16□□□□□ -0.3
CDR2-204ENST00000564542 RFC3P40938 356 aa13.16□□□□□ -0.3
CDR2-204ENST00000564542 CLCN2P51788 898 aa13.16□□□□□ -0.3
CDR2-204ENST00000564542 RAB8AP61006 207 aa13.16□□□□□ -0.3
CDR2-204ENST00000564542 REEP5Q00765 189 aa13.16□□□□□ -0.3
CDR2-204ENST00000564542 TFF3Q07654 80 aa13.16□□□□□ -0.3
CDR2-204ENST00000564542 CSHL1Q14406 222 aa13.16□□□□□ -0.3
CDR2-204ENST00000564542 CRYMQ14894 314 aa13.16□□□□□ -0.3
CDR2-204ENST00000564542 TERF2Q15554 542 aa13.16□□□□□ -0.3
CDR2-204ENST00000564542 TMEM211Q6ICI0 200 aa13.16□□□□□ -0.3
CDR2-204ENST00000564542 ARHGAP11AQ6P4F7 1023 aa13.16□□□□□ -0.3
CDR2-204ENST00000564542 NAT8LQ8N9F0 302 aa13.16□□□□□ -0.3
CDR2-204ENST00000564542 APCDD1LQ8NCL9 501 aa13.16□□□□□ -0.3
CDR2-204ENST00000564542 B3GNT7Q8NFL0 401 aa13.16□□□□□ -0.3
CDR2-204ENST00000564542 GABPB2Q8TAK5 448 aaPredicted RBP13.16□□□□□ -0.3
CDR2-204ENST00000564542 FBXL8Q96CD0 374 aa13.16□□□□□ -0.3
CDR2-204ENST00000564542 TP63Q9H3D4 680 aaPredicted RBP13.16□□□□□ -0.3
CDR2-204ENST00000564542 NECTIN3Q9NQS3 549 aa13.16□□□□□ -0.3
CDR2-204ENST00000564542 NPDC1Q9NQX5 325 aaPredicted RBP13.16□□□□□ -0.3
CDR2-204ENST00000564542 PLSCR2Q9NRY7 297 aa13.16□□□□□ -0.3
CDR2-204ENST00000564542 HCFC1P51610 2035 aa13.15□□□□□ -0.3
CDR2-204ENST00000564542 TRBV11-1A0A0K0K1C0 115 aa13.15□□□□□ -0.3
CDR2-204ENST00000564542 ITGA10O75578 1167 aa13.15□□□□□ -0.3
CDR2-204ENST00000564542 MYO1DO94832 1006 aa13.15□□□□□ -0.3
CDR2-204ENST00000564542 ENO2P09104 434 aaPredicted RBP13.15□□□□□ -0.3
CDR2-204ENST00000564542 CCDC175P0C221 793 aa13.15□□□□□ -0.3
CDR2-204ENST00000564542 CD1EP15812 388 aa13.15□□□□□ -0.3
CDR2-204ENST00000564542 MSX1P28360 303 aa13.15□□□□□ -0.3
CDR2-204ENST00000564542 GABRB3P28472 473 aa13.15□□□□□ -0.3
CDR2-204ENST00000564542 IL2P60568 153 aa13.15□□□□□ -0.3
CDR2-204ENST00000564542 HYAL2Q12891 473 aa13.15□□□□□ -0.3
CDR2-204ENST00000564542 KRTAP21-3Q3LHN1 58 aa13.15□□□□□ -0.3
CDR2-204ENST00000564542 KIAA0408Q6ZU52 694 aa13.15□□□□□ -0.3
CDR2-204ENST00000564542 CEP128Q6ZU80 1094 aa13.15□□□□□ -0.3
CDR2-204ENST00000564542 CNTN4Q8IWV2 1026 aa13.15□□□□□ -0.3
CDR2-204ENST00000564542 TMEM156Q8N614 296 aa13.15□□□□□ -0.3
CDR2-204ENST00000564542 ANKRD53Q8N9V6 530 aa13.15□□□□□ -0.3
CDR2-204ENST00000564542 TRPV3Q8NET8 790 aa13.15□□□□□ -0.3
CDR2-204ENST00000564542 LILRB4Q8NHJ6 448 aa13.15□□□□□ -0.3
CDR2-204ENST00000564542 MAGOHBQ96A72 148 aaKnown RBP13.15□□□□□ -0.3
CDR2-204ENST00000564542 TSNARE1Q96NA8 513 aa13.15□□□□□ -0.3
CDR2-204ENST00000564542 TRIM54Q9BYV2 358 aa13.15□□□□□ -0.3
CDR2-204ENST00000564542 PELI2Q9HAT8 420 aa13.15□□□□□ -0.3
CDR2-204ENST00000564542 ZFATQ9P243 1243 aa13.15□□□□□ -0.3
CDR2-204ENST00000564542 TNFRSF10DQ9UBN6 386 aa13.15□□□□□ -0.3
CDR2-204ENST00000564542 PPIEQ9UNP9 301 aaKnown RBP13.15□□□□□ -0.3
CDR2-204ENST00000564542 RNF6Q9Y252 685 aa13.15□□□□□ -0.3
CDR2-204ENST00000564542 MMACHCQ9Y4U1 282 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms