RNA–Protein interactions for RNA: ENST00000563554.1

AC009163.3-201, humanhuman

TSL 3 BASIC

Gene AC009163.3, Length 852 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009163.3-201ENST00000563554 TRIM40Q6P9F5 258 aa13.36□□□□□ -0.27
AC009163.3-201ENST00000563554 COX15Q7KZN9 410 aa13.36□□□□□ -0.27
AC009163.3-201ENST00000563554 NUDCD3Q8IVD9 361 aa13.36□□□□□ -0.27
AC009163.3-201ENST00000563554 RNF175Q8N4F7 328 aa13.36□□□□□ -0.27
AC009163.3-201ENST00000563554 WDR20Q8TBZ3 569 aa13.36□□□□□ -0.27
AC009163.3-201ENST00000563554 UTP15Q8TED0 518 aaKnown RBP13.36□□□□□ -0.27
AC009163.3-201ENST00000563554 FKBP10Q96AY3 582 aa13.36□□□□□ -0.27
AC009163.3-201ENST00000563554 CMTM7Q96FZ5 175 aa13.36□□□□□ -0.27
AC009163.3-201ENST00000563554 FRG2BQ96QU4 278 aa13.36□□□□□ -0.27
AC009163.3-201ENST00000563554 CCNL2Q96S94 520 aaPredicted RBP13.36□□□□□ -0.27
AC009163.3-201ENST00000563554 YIPF2Q9BWQ6 316 aa13.36□□□□□ -0.27
AC009163.3-201ENST00000563554 SLC29A3Q9BZD2 475 aa13.36□□□□□ -0.27
AC009163.3-201ENST00000563554 SHCBP1LQ9BZQ2 653 aa13.36□□□□□ -0.27
AC009163.3-201ENST00000563554 REXO4Q9GZR2 422 aaKnown RBP13.36□□□□□ -0.27
AC009163.3-201ENST00000563554 KLHL31Q9H511 634 aa13.36□□□□□ -0.27
AC009163.3-201ENST00000563554 COPS7BQ9H9Q2 264 aaPredicted RBP13.36□□□□□ -0.27
AC009163.3-201ENST00000563554 NKIRAS1Q9NYS0 192 aa13.36□□□□□ -0.27
AC009163.3-201ENST00000563554 KCND3Q9UK17 655 aa13.36□□□□□ -0.27
AC009163.3-201ENST00000563554 SNX6Q9UNH7 406 aa13.36□□□□□ -0.27
AC009163.3-201ENST00000563554 PADI2Q9Y2J8 665 aa13.36□□□□□ -0.27
AC009163.3-201ENST00000563554 TSC22D4Q9Y3Q8 395 aa13.36□□□□□ -0.27
AC009163.3-201ENST00000563554 MRPS18BQ9Y676 258 aaKnown RBP13.36□□□□□ -0.27
AC009163.3-201ENST00000563554 SLC22A7Q9Y694 548 aa13.36□□□□□ -0.27
AC009163.3-201ENST00000563554 TNRC6AQ8NDV7 1962 aaKnown RBP13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 A0A087WV48 116 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 A0A088AWK7 358 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 LRIT2A6NDA9 550 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 MAGEB17A8MXT2 336 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 HMGB1P1B2RPK0 211 aaPredicted RBP13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 H0YIG0 161 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 SGK494L7N484 410 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 TERTO14746 1132 aaKnown RBP13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 NPHS1O60500 1241 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 ESRRBO95718 433 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 B3GALT4O96024 378 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 TGFB1P01137 390 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 KRT6AP02538 564 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 KRT6BP04259 564 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 RAB40ALP0C0E4 278 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 ZNF10P21506 573 aaPredicted RBP13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 F8A1P23610 371 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 ITPKBP27987 946 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 KRT6CP48668 564 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 RAP1GDS1P52306 607 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 TMPRSS3P57727 454 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 RPS18P62269 152 aaKnown RBP13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 RPS13P62277 151 aaKnown RBP13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 TLE3Q04726 772 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 TGM3Q08188 693 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 DSG2Q14126 1118 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 RCN2Q14257 317 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 ST3GAL2Q16842 350 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 SGO1Q5FBB7 561 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 TCHHL1Q5QJ38 904 aaPredicted RBP13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 KHDRBS2Q5VWX1 349 aaKnown RBP13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 CCDC81Q6ZN84 652 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 CUZD1Q86UP6 607 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 PDSS2Q86YH6 399 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 AFAP1L2Q8N4X5 818 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 AMER3Q8N944 861 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 OR2L5Q8NG80 312 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 METTL6Q8TCB7 284 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 SELENOMQ8WWX9 145 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 STARD8Q92502 1023 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 MTFMTQ96DP5 389 aaKnown RBP13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 MS4A6EQ96DS6 147 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 FAR2Q96K12 515 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 CNDP1Q96KN2 507 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 F2RL3Q96RI0 385 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 KCNA7Q96RP8 456 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 CENPKQ9BS16 269 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 TRMOQ9BU70 441 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 C20orf27Q9GZN8 174 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 ACTL8Q9H568 366 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 OCEL1Q9H607 264 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 SLC22A11Q9NSA0 550 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 HCN3Q9P1Z3 774 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 TRPC4Q9UBN4 977 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 CTSFQ9UBX1 484 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 PCSK5Q92824 1860 aa13.35□□□□□ -0.27
AC009163.3-201ENST00000563554 PKD1L2Q7Z442 2459 aa13.34□□□□□ -0.27
AC009163.3-201ENST00000563554 BIRC5O15392 142 aa13.34□□□□□ -0.27
AC009163.3-201ENST00000563554 GALR3O60755 368 aaPredicted RBP13.34□□□□□ -0.27
AC009163.3-201ENST00000563554 PDYNP01213 254 aa13.34□□□□□ -0.27
AC009163.3-201ENST00000563554 PTPN4P29074 926 aa13.34□□□□□ -0.27
AC009163.3-201ENST00000563554 SERPINB5P36952 375 aa13.34□□□□□ -0.27
AC009163.3-201ENST00000563554 FOLR3P41439 243 aa13.34□□□□□ -0.27
AC009163.3-201ENST00000563554 NEK2P51955 445 aa13.34□□□□□ -0.27
AC009163.3-201ENST00000563554 PLA2G16P53816 162 aa13.34□□□□□ -0.27
AC009163.3-201ENST00000563554 UCNP55089 124 aa13.34□□□□□ -0.27
AC009163.3-201ENST00000563554 OLR1P78380 273 aa13.34□□□□□ -0.27
AC009163.3-201ENST00000563554 MAT1AQ00266 395 aaKnown RBP13.34□□□□□ -0.27
AC009163.3-201ENST00000563554 OCA2Q04671 838 aa13.34□□□□□ -0.27
AC009163.3-201ENST00000563554 CHI3L2Q15782 390 aa13.34□□□□□ -0.27
AC009163.3-201ENST00000563554 SYT16Q17RD7 645 aa13.34□□□□□ -0.27
AC009163.3-201ENST00000563554 ADPRMQ3LIE5 342 aa13.34□□□□□ -0.27
AC009163.3-201ENST00000563554 C10orf62Q5T681 223 aaPredicted RBP13.34□□□□□ -0.27
AC009163.3-201ENST00000563554 MRPL14Q6P1L8 145 aaKnown RBP13.34□□□□□ -0.27
AC009163.3-201ENST00000563554 CHSY3Q70JA7 882 aa13.34□□□□□ -0.27
AC009163.3-201ENST00000563554 TMEM151BQ8IW70 566 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms