RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 Q8NFD4 153 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 OR8K5Q8NH50 307 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 KIF18AQ8NI77 898 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 SLC44A1Q8WWI5 657 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 CCDC47Q96A33 483 aaKnown RBP4.58□□□□□ -1.68
LINC00254-201ENST00000563416 DHX58Q96C10 678 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 TMCO6Q96DC7 493 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 LINGO1Q96FE5 620 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 SIPA1Q96FS4 1042 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 NUDCD1Q96RS6 583 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 SEMA3CQ99985 751 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 CCDC94Q9BW85 323 aaPredicted RBP4.58□□□□□ -1.68
LINC00254-201ENST00000563416 PANK2Q9BZ23 570 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 ZBP1Q9H171 429 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 CXCL16Q9H2A7 254 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 PIGMQ9H3S5 423 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 EPB41L5Q9HCM4 733 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 PANK4Q9NVE7 773 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 WSB2Q9NYS7 404 aaPredicted RBP4.58□□□□□ -1.68
LINC00254-201ENST00000563416 SPG21Q9NZD8 308 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 THEGQ9P2T0 379 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 TCF19Q9Y242 345 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 KMT2EQ8IZD2 1858 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 A0A1B0GVL5 298 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 PVALEFA0A1B0GWK0 134 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 TTC26A0AVF1 554 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 OR5K3A6NET4 321 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 PRR23AA6NEV1 266 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 ANKRD63C9JTQ0 380 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 TMEM189-UBE2V1I3L0A0 370 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 OGTO15294 1046 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 EIF3DO15371 548 aaKnown RBP eCLIP4.57□□□□□ -1.68
LINC00254-201ENST00000563416 CLDN3O15551 220 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 PAPSS1O43252 624 aaPredicted RBP4.57□□□□□ -1.68
LINC00254-201ENST00000563416 SYNGR3O43761 229 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 KLRC4O43908 158 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 GOSR1O95249 250 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 FYNP06241 537 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 PRSS1P07477 247 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 KCNE1P15382 129 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 TCEA1P23193 301 aaKnown RBP4.57□□□□□ -1.68
LINC00254-201ENST00000563416 PTAFRP25105 342 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 PON1P27169 355 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 SYKP43405 635 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 NDUFA8P51970 172 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 ZBTB6Q15916 424 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 KYAT1Q16773 422 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 KRTAP24-1Q3LI83 254 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 HERC4Q5GLZ8 1057 aaPredicted RBP4.57□□□□□ -1.68
LINC00254-201ENST00000563416 TCEAL5Q5H9L2 206 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 LCN10Q6JVE6 187 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 TMEM184AQ6ZMB5 413 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 ADGRD2Q7Z7M1 963 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 CCDC190Q86UF4 302 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 EPHX4Q8IUS5 362 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 CCDC65Q8IXS2 484 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 GPR65Q8IYL9 337 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 PM20D2Q8IYS1 436 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 OR8H1Q8NGG4 311 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 OR52I2Q8NH67 350 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 SETD6Q8TBK2 473 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 MGARPQ8TDB4 240 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 SECISBP2LQ93073 1101 aaKnown RBP4.57□□□□□ -1.68
LINC00254-201ENST00000563416 PHF21AQ96BD5 680 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 SCRN2Q96FV2 425 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 TSPAN18Q96SJ8 248 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 CDCA3Q99618 268 aaPredicted RBP4.57□□□□□ -1.68
LINC00254-201ENST00000563416 THUMPD3Q9BV44 507 aaKnown RBP4.57□□□□□ -1.68
LINC00254-201ENST00000563416 FGFBP2Q9BYJ0 223 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 HRH4Q9H3N8 390 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 GOLPH3LQ9H4A5 285 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 PLK3Q9H4B4 646 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 OPA3Q9H6K4 179 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 MDFICQ9P1T7 246 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 AMACRQ9UHK6 382 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 OSGIN1Q9UJX0 560 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 CPSF3Q9UKF6 684 aaKnown RBP4.57□□□□□ -1.68
LINC00254-201ENST00000563416 KIAA1549LQ6ZVL6 1849 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 COL4A2P08572 1712 aa4.57□□□□□ -1.68
LINC00254-201ENST00000563416 TICRRQ7Z2Z1 1910 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 IGLV5-45A0A087WSX0 123 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 SMIM28A0A1B0GU29 152 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 A6NL46 340 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 HIDE1A8MVS5 230 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 H3BQ06 376 aaPredicted RBP4.56□□□□□ -1.68
LINC00254-201ENST00000563416 MITFO75030 526 aaPredicted RBP4.56□□□□□ -1.68
LINC00254-201ENST00000563416 AVILO75366 819 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 RECQL5O94762 991 aaPredicted RBP4.56□□□□□ -1.68
LINC00254-201ENST00000563416 TPPPO94811 219 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 GCNT3O95395 438 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 PLGP00747 810 aaPredicted RBP4.56□□□□□ -1.68
LINC00254-201ENST00000563416 IGHV4-39P01824 125 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 TPOP07202 933 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 CLTAP09496 248 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 THEGLP0DJG4 465 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 CXCL8P10145 99 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 CASP1P29466 404 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 ADSSP30520 456 aa4.56□□□□□ -1.68
LINC00254-201ENST00000563416 TLX1P31314 330 aaPredicted RBP4.56□□□□□ -1.68
LINC00254-201ENST00000563416 ANP32AP39687 249 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms