RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 TM4SF18Q96CE8 201 aa17.21■□□□□ 0.35
COMMD4-208ENST00000563220 MS4A6EQ96DS6 147 aa17.21■□□□□ 0.35
COMMD4-208ENST00000563220 TEFMQ96QE5 360 aaKnown RBP17.21■□□□□ 0.35
COMMD4-208ENST00000563220 PRPF18Q99633 342 aaKnown RBP17.21■□□□□ 0.35
COMMD4-208ENST00000563220 PIF1Q9H611 641 aa17.21■□□□□ 0.35
COMMD4-208ENST00000563220 TMEM74BQ9NUR3 256 aa17.21■□□□□ 0.35
COMMD4-208ENST00000563220 FAM120CQ9NX05 1096 aaKnown RBP17.21■□□□□ 0.35
COMMD4-208ENST00000563220 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.21■□□□□ 0.35
COMMD4-208ENST00000563220 EGFL7Q9UHF1 273 aa17.21■□□□□ 0.35
COMMD4-208ENST00000563220 PCDHGA2Q9Y5H1 932 aa17.21■□□□□ 0.35
COMMD4-208ENST00000563220 SNRNP200O75643 2136 aaKnown RBP17.21■□□□□ 0.35
COMMD4-208ENST00000563220 TECTAO75443 2155 aa17.21■□□□□ 0.35
COMMD4-208ENST00000563220 SPAG17Q6Q759 2223 aa17.21■□□□□ 0.35
COMMD4-208ENST00000563220 MUC3AQ02505 3323 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 OR5K3A6NET4 321 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 RFXANKO14593 260 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 TMPRSS11DO60235 418 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 PVRP15151 417 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 FASLGP48023 281 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 DHPSP49366 369 aaPredicted RBP17.2■□□□□ 0.34
COMMD4-208ENST00000563220 AP2B1P63010 937 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 PDE7AQ13946 482 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 SLC5A12Q1EHB4 618 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 DUOXA1Q1HG43 343 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 TMEM35AQ53FP2 167 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 LYSMD4Q5XG99 296 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 CYP2R1Q6VVX0 501 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 RNF111Q6ZNA4 994 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 C17orf82Q86X59 251 aaPredicted RBP17.2■□□□□ 0.34
COMMD4-208ENST00000563220 AURKBQ96GD4 344 aaPredicted RBP17.2■□□□□ 0.34
COMMD4-208ENST00000563220 C17orf62Q9BQA9 187 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 CENPKQ9BS16 269 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 DDX31Q9H8H2 851 aaKnown RBP17.2■□□□□ 0.34
COMMD4-208ENST00000563220 STOML1Q9UBI4 398 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 CEP192Q8TEP8 1941 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 PRSS51A0A1B0GVH4 220 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 ARHGAP10A1A4S6 786 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 H3BNX3 289 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 ANPEPP15144 967 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 SOX11P35716 441 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 MAPK12P53778 367 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 RPS15AP62244 130 aaKnown RBP17.2■□□□□ 0.34
COMMD4-208ENST00000563220 MRPS22P82650 360 aaKnown RBP17.2■□□□□ 0.34
COMMD4-208ENST00000563220 MUM1Q2TAK8 710 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 OGFOD3Q6PK18 319 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 ZNF793Q6ZN11 406 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 OOSP2Q86WS3 158 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 C1orf210Q8IVY1 113 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 ZUFSPQ96AP4 578 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 QRFPRQ96P65 431 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 OR2A5Q96R48 311 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 KCTD14Q9BQ13 255 aaPredicted RBP17.2■□□□□ 0.34
COMMD4-208ENST00000563220 THUMPD3Q9BV44 507 aaKnown RBP17.2■□□□□ 0.34
COMMD4-208ENST00000563220 BCAP29Q9UHQ4 241 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 ADAM29Q9UKF5 820 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 PILRAQ9UKJ1 303 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 KLK4Q9Y5K2 254 aa17.2■□□□□ 0.34
COMMD4-208ENST00000563220 CPSF4O95639 269 aaKnown RBP17.19■□□□□ 0.34
COMMD4-208ENST00000563220 C1QCP02747 245 aa17.19■□□□□ 0.34
COMMD4-208ENST00000563220 ANXA6P08133 673 aa17.19■□□□□ 0.34
COMMD4-208ENST00000563220 TRPC1P48995 793 aa17.19■□□□□ 0.34
COMMD4-208ENST00000563220 HNRNPFP52597 415 aaKnown RBP17.19■□□□□ 0.34
COMMD4-208ENST00000563220 BNC1Q01954 994 aa17.19■□□□□ 0.34
COMMD4-208ENST00000563220 SLC34A1Q06495 639 aa17.19■□□□□ 0.34
COMMD4-208ENST00000563220 BNIP3Q12983 259 aa17.19■□□□□ 0.34
COMMD4-208ENST00000563220 TAF11Q15544 211 aa17.19■□□□□ 0.34
COMMD4-208ENST00000563220 MPEG1Q2M385 716 aa17.19■□□□□ 0.34
COMMD4-208ENST00000563220 TOR1AIP1Q5JTV8 583 aa17.19■□□□□ 0.34
COMMD4-208ENST00000563220 PMS2CLQ68D20 193 aa17.19■□□□□ 0.34
COMMD4-208ENST00000563220 ABHD17CQ6PCB6 329 aa17.19■□□□□ 0.34
COMMD4-208ENST00000563220 IKBIPQ70UQ0 350 aa17.19■□□□□ 0.34
COMMD4-208ENST00000563220 R3HCC1LQ7Z5L2 792 aaKnown RBP17.19■□□□□ 0.34
COMMD4-208ENST00000563220 SPATA24Q86W54 205 aa17.19■□□□□ 0.34
COMMD4-208ENST00000563220 NUDT13Q86X67 352 aa17.19■□□□□ 0.34
COMMD4-208ENST00000563220 DHFR2Q86XF0 187 aa17.19■□□□□ 0.34
COMMD4-208ENST00000563220 ZNF583Q96ND8 569 aa17.19■□□□□ 0.34
COMMD4-208ENST00000563220 PANX1Q96RD7 426 aa17.19■□□□□ 0.34
COMMD4-208ENST00000563220 PRDM7Q9NQW5 492 aa17.19■□□□□ 0.34
COMMD4-208ENST00000563220 SNX11Q9Y5W9 270 aa17.19■□□□□ 0.34
COMMD4-208ENST00000563220 A0A0A6YYD5 115 aa17.18■□□□□ 0.34
COMMD4-208ENST00000563220 A0A0J9YVX5 310 aa17.18■□□□□ 0.34
COMMD4-208ENST00000563220 ERI3O43414 337 aaKnown RBP17.18■□□□□ 0.34
COMMD4-208ENST00000563220 ATP6V1B2P21281 511 aa17.18■□□□□ 0.34
COMMD4-208ENST00000563220 CTSKP43235 329 aa17.18■□□□□ 0.34
COMMD4-208ENST00000563220 PTDSS1P48651 473 aaKnown RBP17.18■□□□□ 0.34
COMMD4-208ENST00000563220 SESN3P58005 492 aa17.18■□□□□ 0.34
COMMD4-208ENST00000563220 OR4D2P58180 307 aa17.18■□□□□ 0.34
COMMD4-208ENST00000563220 BNIP2Q12982 314 aa17.18■□□□□ 0.34
COMMD4-208ENST00000563220 DGLUCYQ7Z3D6 616 aa17.18■□□□□ 0.34
COMMD4-208ENST00000563220 PTRH1Q86Y79 214 aaKnown RBP17.18■□□□□ 0.34
COMMD4-208ENST00000563220 SDR16C5Q8N3Y7 309 aa17.18■□□□□ 0.34
COMMD4-208ENST00000563220 OR10A6Q8NH74 314 aa17.18■□□□□ 0.34
COMMD4-208ENST00000563220 NAF1Q96HR8 494 aaKnown RBP17.18■□□□□ 0.34
COMMD4-208ENST00000563220 CCDC115Q96NT0 180 aa17.18■□□□□ 0.34
COMMD4-208ENST00000563220 GBP5Q96PP8 586 aa17.18■□□□□ 0.34
COMMD4-208ENST00000563220 ECSITQ9BQ95 431 aa17.18■□□□□ 0.34
COMMD4-208ENST00000563220 CPPED1Q9BRF8 314 aaPredicted RBP17.18■□□□□ 0.34
COMMD4-208ENST00000563220 BHLHE41Q9C0J9 482 aaPredicted RBP17.18■□□□□ 0.34
COMMD4-208ENST00000563220 SLC6A16Q9GZN6 736 aa17.18■□□□□ 0.34
COMMD4-208ENST00000563220 ANKMY1Q9P2S6 941 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms