RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 LHX9Q9NQ69 397 aa6.69□□□□□ -1.34
CTDSPL2-210ENST00000560834 FBXO8Q9NRD0 319 aa6.69□□□□□ -1.34
CTDSPL2-210ENST00000560834 PNPOQ9NVS9 261 aa6.69□□□□□ -1.34
CTDSPL2-210ENST00000560834 FOXJ2Q9P0K8 574 aa6.69□□□□□ -1.34
CTDSPL2-210ENST00000560834 AKAP7Q9P0M2 348 aaPredicted RBP6.69□□□□□ -1.34
CTDSPL2-210ENST00000560834 MARCOQ9UEW3 520 aaPredicted RBP6.69□□□□□ -1.34
CTDSPL2-210ENST00000560834 RARRES3Q9UL19 164 aa6.69□□□□□ -1.34
CTDSPL2-210ENST00000560834 SNX6Q9UNH7 406 aa6.69□□□□□ -1.34
CTDSPL2-210ENST00000560834 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.69□□□□□ -1.34
CTDSPL2-210ENST00000560834 FIS1Q9Y3D6 152 aa6.69□□□□□ -1.34
CTDSPL2-210ENST00000560834 TRAF6Q9Y4K3 522 aa6.69□□□□□ -1.34
CTDSPL2-210ENST00000560834 CCL27Q9Y4X3 112 aa6.69□□□□□ -1.34
CTDSPL2-210ENST00000560834 PCDHGA3Q9Y5H0 932 aa6.69□□□□□ -1.34
CTDSPL2-210ENST00000560834 B3GALT1Q9Y5Z6 326 aa6.69□□□□□ -1.34
CTDSPL2-210ENST00000560834 ZFHX4Q86UP3 3567 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 LRIT2A6NDA9 550 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 ANKDD1BA6NHY2 528 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 CDRT15L2A8MXV6 281 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 TCP11X1B4DZS4 312 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 NPIPB8E9PQR5 432 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 PLPP1O14494 284 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 ZNF195O14628 629 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 POLR1CO15160 346 aaPredicted RBP6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 ZNF749O43361 778 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 FOXS1O43638 330 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 EDF1O60869 148 aaKnown RBP6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 CRCPO75575 148 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 SCRG1O75711 98 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 SEMA3DO95025 777 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 SCELO95171 688 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 ZIC2O95409 532 aaPredicted RBP6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 DLGAP3O95886 979 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 B3GALT4O96024 378 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 TGFB1P01137 390 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 KRT6AP02538 564 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 KRT6BP04259 564 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 EIF2S1P05198 315 aaKnown RBP6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 SERPIND1P05546 499 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 ADRB1P08588 477 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 JMJD7P0C870 316 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 ZNF888P0CJ79 500 aaPredicted RBP6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 SMIM10L1P0DMW3 83 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 HSD3B1P14060 373 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 ALOX15P16050 662 aaPredicted RBP6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 VAMP1P23763 118 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 HSD3B2P26439 372 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 RORAP35398 523 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 KRT6CP48668 564 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 MAPK10P53779 464 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 PHEXP78562 749 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 HMGCS1Q01581 520 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 ZNF33BQ06732 778 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 RGS1Q08116 209 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 TBL3Q12788 808 aaKnown RBP6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 CUL3Q13618 768 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 GRM7Q14831 915 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 PDCD2Q16342 344 aaPredicted RBP6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 SGO1Q5FBB7 561 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 WASHC2DQ5SRD0 308 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 KHDRBS2Q5VWX1 349 aaKnown RBP6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 ZNF385CQ66K41 422 aaPredicted RBP6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 CGB2Q6NT52 195 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 RHBDD2Q6NTF9 364 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 FOXR1Q6PIV2 292 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 SCIMPQ6UWF3 145 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 CEACAM20Q6UY09 585 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 ZNF793Q6ZN11 406 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 TRIM46Q7Z4K8 759 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 UBE3DQ7Z6J8 389 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 PDSS2Q86YH6 399 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 TMEM126BQ8IUX1 230 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 CLYBLQ8N0X4 340 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 AFAP1L2Q8N4X5 818 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 ZNF655Q8N720 491 aaPredicted RBP6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 TTC29Q8NA56 475 aaPredicted RBP6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 SLC38A9Q8NBW4 561 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 PIWIL2Q8TC59 973 aaKnown RBP6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 UTP15Q8TED0 518 aaKnown RBP6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 CCT6BQ92526 530 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 N4BP2L2Q92802 583 aaPredicted RBP6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 GAL3ST3Q96A11 431 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 MTFMTQ96DP5 389 aaKnown RBP6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 C19orf60Q96EN9 201 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 CMTM7Q96FZ5 175 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 SMIM10Q96HG1 83 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 C3orf30Q96M34 536 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 QRFPRQ96P65 431 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 ZNF317Q96PQ6 595 aaPredicted RBP6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 F2RL3Q96RI0 385 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 SCNM1Q9BWG6 230 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 REXO4Q9GZR2 422 aaKnown RBP6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 ILKAPQ9H0C8 392 aaPredicted RBP6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 OR51B5Q9H339 312 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 POLR1BQ9H9Y6 1135 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 CUTCQ9NTM9 273 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 SLC39A1Q9NY26 324 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 PSD3Q9NYI0 1048 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 DHCR7Q9UBM7 475 aaKnown RBP6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 ADGRE2Q9UHX3 823 aa6.68□□□□□ -1.34
CTDSPL2-210ENST00000560834 SRPK3Q9UPE1 567 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms