RNA–Protein interactions for RNA: ENST00000560603.5

MARK3-221, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-221ENST00000560603 NPDC1Q9NQX5 325 aaPredicted RBP11.27□□□□□ -0.61
MARK3-221ENST00000560603 FBXO6Q9NRD1 293 aaPredicted RBP11.27□□□□□ -0.61
MARK3-221ENST00000560603 HOMER3Q9NSC5 361 aa11.27□□□□□ -0.61
MARK3-221ENST00000560603 TRMT6Q9UJA5 497 aaKnown RBP11.27□□□□□ -0.61
MARK3-221ENST00000560603 EDARQ9UNE0 448 aa11.27□□□□□ -0.61
MARK3-221ENST00000560603 FLNAP21333 2647 aaKnown RBP11.27□□□□□ -0.61
MARK3-221ENST00000560603 ZNF407Q9C0G0 2248 aa11.27□□□□□ -0.61
MARK3-221ENST00000560603 SDR42E2A6NKP2 422 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 SLC16A5O15375 505 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 TOXO94900 526 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 RNH1P13489 461 aaKnown RBP11.26□□□□□ -0.61
MARK3-221ENST00000560603 DNAJA1P31689 397 aaKnown RBP11.26□□□□□ -0.61
MARK3-221ENST00000560603 RFC3P40938 356 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 CLCN2P51788 898 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 PPP2R2AP63151 447 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 TFF3Q07654 80 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 SP140Q13342 867 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 CTBP1Q13363 440 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 ZNF549Q6P9A3 640 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 STRA8Q7Z7C7 330 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 DENND6AQ8IWF6 608 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 MYO1HQ8N1T3 1032 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 MARVELD2Q8N4S9 558 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 GPATCH11Q8N954 259 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 ZFP62Q8NB50 900 aaPredicted RBP11.26□□□□□ -0.61
MARK3-221ENST00000560603 ZNF740Q8NDX6 193 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 ABHD11Q8NFV4 315 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 OR5M3Q8NGP4 307 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 NINJ1Q92982 152 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 CCDC77Q9BR77 488 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 TMUB1Q9BVT8 246 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 SARGQ9BW04 601 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 SGPP1Q9BX95 441 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 UCK2Q9BZX2 261 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 SLC6A16Q9GZN6 736 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 ATG10Q9H0Y0 220 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 PRDM9Q9NQV7 894 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 PLSCR2Q9NRY7 297 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 PDE10AQ9Y233 779 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 MED16Q9Y2X0 877 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 HCFC1P51610 2035 aa11.26□□□□□ -0.61
MARK3-221ENST00000560603 PRRC2AP48634 2157 aaKnown RBP11.26□□□□□ -0.61
MARK3-221ENST00000560603 TRBV11-1A0A0K0K1C0 115 aa11.25□□□□□ -0.61
MARK3-221ENST00000560603 TCRBV16S1A1N1A0A5B0 115 aa11.25□□□□□ -0.61
MARK3-221ENST00000560603 TRBC2A0A5B9 178 aa11.25□□□□□ -0.61
MARK3-221ENST00000560603 ACOT7O00154 380 aa11.25□□□□□ -0.61
MARK3-221ENST00000560603 ITGA10O75578 1167 aa11.25□□□□□ -0.61
MARK3-221ENST00000560603 PDE9AO76083 593 aa11.25□□□□□ -0.61
MARK3-221ENST00000560603 TUBB4AP04350 444 aa11.25□□□□□ -0.61
MARK3-221ENST00000560603 MLNP12872 115 aa11.25□□□□□ -0.61
MARK3-221ENST00000560603 NPPBP16860 134 aa11.25□□□□□ -0.61
MARK3-221ENST00000560603 PMPCAQ10713 525 aa11.25□□□□□ -0.61
MARK3-221ENST00000560603 SIX1Q15475 284 aaPredicted RBP11.25□□□□□ -0.61
MARK3-221ENST00000560603 RGS9BPQ6ZS82 235 aa11.25□□□□□ -0.61
MARK3-221ENST00000560603 KIAA0408Q6ZU52 694 aa11.25□□□□□ -0.61
MARK3-221ENST00000560603 GPALPP1Q8IXQ4 340 aa11.25□□□□□ -0.61
MARK3-221ENST00000560603 B3GNT7Q8NFL0 401 aa11.25□□□□□ -0.61
MARK3-221ENST00000560603 OR4K1Q8NGD4 311 aa11.25□□□□□ -0.61
MARK3-221ENST00000560603 GABPB2Q8TAK5 448 aaPredicted RBP11.25□□□□□ -0.61
MARK3-221ENST00000560603 NT5CQ8TCD5 201 aa11.25□□□□□ -0.61
MARK3-221ENST00000560603 CREB3L4Q8TEY5 395 aa11.25□□□□□ -0.61
MARK3-221ENST00000560603 ATL1Q8WXF7 558 aa11.25□□□□□ -0.61
MARK3-221ENST00000560603 SEC16BQ96JE7 1060 aa11.25□□□□□ -0.61
MARK3-221ENST00000560603 FOXC2Q99958 501 aa11.25□□□□□ -0.61
MARK3-221ENST00000560603 DESI2Q9BSY9 194 aa11.25□□□□□ -0.61
MARK3-221ENST00000560603 AARSD1Q9BTE6 412 aaKnown RBP11.25□□□□□ -0.61
MARK3-221ENST00000560603 TRIM54Q9BYV2 358 aa11.25□□□□□ -0.61
MARK3-221ENST00000560603 XAB2Q9HCS7 855 aaKnown RBP11.25□□□□□ -0.61
MARK3-221ENST00000560603 C20orf96Q9NUD7 363 aaPredicted RBP11.25□□□□□ -0.61
MARK3-221ENST00000560603 ZFP69BQ9UJL9 534 aa11.25□□□□□ -0.61
MARK3-221ENST00000560603 FBXW2Q9UKT8 454 aa11.25□□□□□ -0.61
MARK3-221ENST00000560603 ERVK-11Q9UQG0 969 aa11.25□□□□□ -0.61
MARK3-221ENST00000560603 SH2B3Q9UQQ2 575 aa11.25□□□□□ -0.61
MARK3-221ENST00000560603 YARS2Q9Y2Z4 477 aaKnown RBP11.25□□□□□ -0.61
MARK3-221ENST00000560603 MAD1L1Q9Y6D9 718 aa11.25□□□□□ -0.61
MARK3-221ENST00000560603 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.24□□□□□ -0.61
MARK3-221ENST00000560603 TCRBV7S3A2A0A539 114 aa11.24□□□□□ -0.61
MARK3-221ENST00000560603 SYNDIG1LA6NDD5 238 aa11.24□□□□□ -0.61
MARK3-221ENST00000560603 FIGNL2A6NMB9 653 aa11.24□□□□□ -0.61
MARK3-221ENST00000560603 A8MUA0 341 aa11.24□□□□□ -0.61
MARK3-221ENST00000560603 BCKDKO14874 412 aa11.24□□□□□ -0.61
MARK3-221ENST00000560603 KLK8O60259 260 aa11.24□□□□□ -0.61
MARK3-221ENST00000560603 AVILO75366 819 aa11.24□□□□□ -0.61
MARK3-221ENST00000560603 ZNF888P0CJ79 500 aaPredicted RBP11.24□□□□□ -0.61
MARK3-221ENST00000560603 MAOAP21397 527 aa11.24□□□□□ -0.61
MARK3-221ENST00000560603 AHRP35869 848 aa11.24□□□□□ -0.61
MARK3-221ENST00000560603 SLC1A2P43004 574 aa11.24□□□□□ -0.61
MARK3-221ENST00000560603 MAGEA6P43360 314 aa11.24□□□□□ -0.61
MARK3-221ENST00000560603 KCNJ1P48048 391 aa11.24□□□□□ -0.61
MARK3-221ENST00000560603 SSR4P51571 173 aa11.24□□□□□ -0.61
MARK3-221ENST00000560603 IST1P53990 364 aa11.24□□□□□ -0.61
MARK3-221ENST00000560603 GPR85P60893 370 aa11.24□□□□□ -0.61
MARK3-221ENST00000560603 OLR1P78380 273 aa11.24□□□□□ -0.61
MARK3-221ENST00000560603 BTG2P78543 158 aa11.24□□□□□ -0.61
MARK3-221ENST00000560603 PLGLB1Q02325 96 aa11.24□□□□□ -0.61
MARK3-221ENST00000560603 GPS1Q13098 491 aa11.24□□□□□ -0.61
MARK3-221ENST00000560603 CSHL1Q14406 222 aa11.24□□□□□ -0.61
MARK3-221ENST00000560603 TERF2Q15554 542 aa11.24□□□□□ -0.61
MARK3-221ENST00000560603 DUPD1Q68J44 220 aa11.24□□□□□ -0.61
MARK3-221ENST00000560603 TGIF2LYQ8IUE0 185 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms