RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 PLA2G16P53816 162 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 STXBP1P61764 594 aaKnown RBP10.69□□□□□ -0.7
USP3-218ENST00000560202 CFHR1Q03591 330 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 RGS1Q08116 209 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 SUZ12Q15022 739 aaKnown RBP10.69□□□□□ -0.7
USP3-218ENST00000560202 MMEL1Q495T6 779 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 REP15Q6BDI9 236 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 OR4C11Q6IEV9 310 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 FRMPD2BQ6IN97 320 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 USP53Q70EK8 1073 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 PAGE2Q7Z2X7 111 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 PLXDC1Q8IUK5 500 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 RIMKLAQ8IXN7 391 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 OR4N4Q8N0Y3 316 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 KIF2BQ8N4N8 673 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 CAMKVQ8NCB2 501 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 NUDT8Q8WV74 236 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 RERGQ96A58 199 aaPredicted RBP10.69□□□□□ -0.7
USP3-218ENST00000560202 TCTN2Q96GX1 697 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 QRFPRQ96P65 431 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 NPAS2Q99743 824 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 YIPF3Q9GZM5 350 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 CLMPQ9H6B4 373 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 FAM60AQ9NP50 221 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 LHX9Q9NQ69 397 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 NDUFAF1Q9Y375 327 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 IGHV5-51A0A0C4DH38 117 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 LNP1A1A4G5 178 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 DYTNA2CJ06 578 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 ENO4A6NNW6 628 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 H0YGG7 62 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 ANGPT2O15123 496 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 ERI3O43414 337 aaKnown RBP10.69□□□□□ -0.7
USP3-218ENST00000560202 SH3BP5O60239 455 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 PRMT3O60678 531 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 EEDO75530 441 aaKnown RBP10.69□□□□□ -0.7
USP3-218ENST00000560202 KLHL18O94889 574 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 LRATO95237 230 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 KRT16P08779 473 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 ITGAXP20702 1163 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 NUDT2P50583 147 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 ARFIP1P53367 373 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 ARF3P61204 181 aaPredicted RBP10.69□□□□□ -0.7
USP3-218ENST00000560202 SLC25A3Q00325 362 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 ZNF763Q0D2J5 394 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 ART3Q13508 389 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 HKDC1Q2TB90 917 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 PROX2Q3B8N5 592 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 TIGD2Q4W5G0 525 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 ZC3H12BQ5HYM0 836 aaKnown RBP10.69□□□□□ -0.7
USP3-218ENST00000560202 PERM1Q5SV97 790 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 CCNYL2Q5T2Q4 361 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 ABHD17CQ6PCB6 329 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 NUDT13Q86X67 352 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 DNAJC22Q8N4W6 341 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 SUMF1Q8NBK3 374 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 KCT2Q8NC54 265 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 SRFBP1Q8NEF9 429 aaKnown RBP10.69□□□□□ -0.7
USP3-218ENST00000560202 OR2L5Q8NG80 312 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 CDC26Q8NHZ8 85 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.69□□□□□ -0.7
USP3-218ENST00000560202 C16orf78Q8WTQ4 265 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 NAT6Q93015 286 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 GFM2Q969S9 779 aaKnown RBP10.69□□□□□ -0.7
USP3-218ENST00000560202 VPS33AQ96AX1 596 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 KCNC2Q96PR1 638 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 C17orf62Q9BQA9 187 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 DDX31Q9H8H2 851 aaKnown RBP10.69□□□□□ -0.7
USP3-218ENST00000560202 DNAAF2Q9NVR5 837 aaKnown RBP10.69□□□□□ -0.7
USP3-218ENST00000560202 KLHL3Q9UH77 587 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 ADAM29Q9UKF5 820 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 PCDHGB2Q9Y5G2 931 aa10.69□□□□□ -0.7
USP3-218ENST00000560202 PI4KAP42356 2102 aa10.68□□□□□ -0.7
USP3-218ENST00000560202 A0A0G2JN53 185 aa10.68□□□□□ -0.7
USP3-218ENST00000560202 ARHGAP10A1A4S6 786 aa10.68□□□□□ -0.7
USP3-218ENST00000560202 ASPDHA6ND91 283 aa10.68□□□□□ -0.7
USP3-218ENST00000560202 C4orf51C9J302 202 aa10.68□□□□□ -0.7
USP3-218ENST00000560202 MRASO14807 208 aa10.68□□□□□ -0.7
USP3-218ENST00000560202 P2RX6O15547 441 aa10.68□□□□□ -0.7
USP3-218ENST00000560202 AKAP10O43572 662 aa10.68□□□□□ -0.7
USP3-218ENST00000560202 C9P02748 559 aa10.68□□□□□ -0.7
USP3-218ENST00000560202 EIF2S1P05198 315 aaKnown RBP10.68□□□□□ -0.7
USP3-218ENST00000560202 IL6P05231 212 aa10.68□□□□□ -0.7
USP3-218ENST00000560202 ZNF806P0C7X5 589 aa10.68□□□□□ -0.7
USP3-218ENST00000560202 CKMT1AP12532 417 aa10.68□□□□□ -0.7
USP3-218ENST00000560202 CSF2RBP32927 897 aa10.68□□□□□ -0.7
USP3-218ENST00000560202 SSR2P43308 183 aa10.68□□□□□ -0.7
USP3-218ENST00000560202 DGKQP52824 942 aa10.68□□□□□ -0.7
USP3-218ENST00000560202 C21orf58P58505 322 aa10.68□□□□□ -0.7
USP3-218ENST00000560202 RAB8AP61006 207 aa10.68□□□□□ -0.7
USP3-218ENST00000560202 DAB2P98082 770 aa10.68□□□□□ -0.7
USP3-218ENST00000560202 TGM3Q08188 693 aa10.68□□□□□ -0.7
USP3-218ENST00000560202 TCF15Q12870 199 aa10.68□□□□□ -0.7
USP3-218ENST00000560202 SQSTM1Q13501 440 aa10.68□□□□□ -0.7
USP3-218ENST00000560202 FAM174BQ3ZCQ3 159 aa10.68□□□□□ -0.7
USP3-218ENST00000560202 DNAL1Q4LDG9 190 aa10.68□□□□□ -0.7
USP3-218ENST00000560202 COQ5Q5HYK3 327 aa10.68□□□□□ -0.7
USP3-218ENST00000560202 SPANXN4Q5MJ08 99 aa10.68□□□□□ -0.7
USP3-218ENST00000560202 MANEAQ5SRI9 462 aa10.68□□□□□ -0.7
USP3-218ENST00000560202 TRIM40Q6P9F5 258 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms