RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 CCDC137Q6PK04 289 aaKnown RBP8.58□□□□□ -1.04
HDDC3-204ENST00000559834 C3P1Q6ZMU1 363 aa8.58□□□□□ -1.04
HDDC3-204ENST00000559834 KIAA0408Q6ZU52 694 aa8.58□□□□□ -1.04
HDDC3-204ENST00000559834 CDH24Q86UP0 819 aa8.58□□□□□ -1.04
HDDC3-204ENST00000559834 SPNS2Q8IVW8 549 aa8.58□□□□□ -1.04
HDDC3-204ENST00000559834 SULF2Q8IWU5 870 aa8.58□□□□□ -1.04
HDDC3-204ENST00000559834 PPIL6Q8IXY8 311 aa8.58□□□□□ -1.04
HDDC3-204ENST00000559834 ARMC10Q8N2F6 343 aa8.58□□□□□ -1.04
HDDC3-204ENST00000559834 KIF2BQ8N4N8 673 aa8.58□□□□□ -1.04
HDDC3-204ENST00000559834 NAT8LQ8N9F0 302 aa8.58□□□□□ -1.04
HDDC3-204ENST00000559834 C16orf52Q8NHV5 167 aa8.58□□□□□ -1.04
HDDC3-204ENST00000559834 UTP15Q8TED0 518 aaKnown RBP8.58□□□□□ -1.04
HDDC3-204ENST00000559834 GRK7Q8WTQ7 553 aa8.58□□□□□ -1.04
HDDC3-204ENST00000559834 SLC5A11Q8WWX8 675 aa8.58□□□□□ -1.04
HDDC3-204ENST00000559834 RND1Q92730 232 aa8.58□□□□□ -1.04
HDDC3-204ENST00000559834 PYCR2Q96C36 320 aa8.58□□□□□ -1.04
HDDC3-204ENST00000559834 FBXL8Q96CD0 374 aa8.58□□□□□ -1.04
HDDC3-204ENST00000559834 LINGO1Q96FE5 620 aa8.58□□□□□ -1.04
HDDC3-204ENST00000559834 PBKQ96KB5 322 aa8.58□□□□□ -1.04
HDDC3-204ENST00000559834 AIF1LQ9BQI0 150 aa8.58□□□□□ -1.04
HDDC3-204ENST00000559834 CCDC77Q9BR77 488 aa8.58□□□□□ -1.04
HDDC3-204ENST00000559834 NAT9Q9BTE0 207 aa8.58□□□□□ -1.04
HDDC3-204ENST00000559834 DYRK1BQ9Y463 629 aa8.58□□□□□ -1.04
HDDC3-204ENST00000559834 KCNE2Q9Y6J6 123 aa8.58□□□□□ -1.04
HDDC3-204ENST00000559834 NCOA6Q14686 2063 aaPredicted RBP8.58□□□□□ -1.04
HDDC3-204ENST00000559834 POLQO75417 2590 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 IGKV3D-11A0A0A0MRZ8 115 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 TCRBV16S1A1N1A0A5B0 115 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 A8MUA0 341 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 CLDN4O14493 209 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 ADAM10O14672 748 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 NRDCO43847 1150 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 CDC40O60508 579 aaKnown RBP eCLIP8.57□□□□□ -1.04
HDDC3-204ENST00000559834 DNAJB6O75190 326 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 H2AFYO75367 372 aaKnown RBP8.57□□□□□ -1.04
HDDC3-204ENST00000559834 AHSGP02765 367 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 SERPINA6P08185 405 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 SMIM10L1P0DMW3 83 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 TFEBP19484 476 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 MAOAP21397 527 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 CHRNB4P30926 498 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 PTGER1P34995 402 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 HNF4AP41235 474 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 CDKN2DP55273 166 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 KRTAP10-9P60411 292 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 RAB8AP61006 207 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 STXBP1P61764 594 aaKnown RBP8.57□□□□□ -1.04
HDDC3-204ENST00000559834 TIAL1Q01085 375 aaKnown RBP eCLIP8.57□□□□□ -1.04
HDDC3-204ENST00000559834 CRYMQ14894 314 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 RBBP5Q15291 538 aaKnown RBP8.57□□□□□ -1.04
HDDC3-204ENST00000559834 TERF2Q15554 542 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 TESK1Q15569 626 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 CYP1B1Q16678 543 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 BBS9Q3SYG4 887 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 SPANXN3Q5MJ09 141 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 CATSPEREQ5SY80 951 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 CEP128Q6ZU80 1094 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 NCCRP1Q6ZVX7 275 aaPredicted RBP8.57□□□□□ -1.04
HDDC3-204ENST00000559834 GALNT7Q86SF2 657 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 GAS2L3Q86XJ1 694 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 CHERPQ8IWX8 916 aaKnown RBP8.57□□□□□ -1.04
HDDC3-204ENST00000559834 CYP4Z2PQ8N1L4 340 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 RASGEF1CQ8N431 466 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 ZFP62Q8NB50 900 aaPredicted RBP8.57□□□□□ -1.04
HDDC3-204ENST00000559834 ACBD4Q8NC06 268 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 NFAM1Q8NET5 270 aaPredicted RBP8.57□□□□□ -1.04
HDDC3-204ENST00000559834 B3GNT7Q8NFL0 401 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 LILRB4Q8NHJ6 448 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 NEIL2Q969S2 332 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 SMIM10Q96HG1 83 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 FAR2Q96K12 515 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 OR4K3Q96R72 315 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 SLC6A16Q9GZN6 736 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 RHBGQ9H310 441 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 TP63Q9H3D4 680 aaPredicted RBP8.57□□□□□ -1.04
HDDC3-204ENST00000559834 PELI2Q9HAT8 420 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 SLC24A3Q9HC58 644 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 KCNJ16Q9NPI9 418 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 TIMMDC1Q9NPL8 285 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 PPANQ9NQ55 473 aaKnown RBP8.57□□□□□ -1.04
HDDC3-204ENST00000559834 ZFATQ9P243 1243 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 FBXW2Q9UKT8 454 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 CORO1CQ9ULV4 474 aaPredicted RBP8.57□□□□□ -1.04
HDDC3-204ENST00000559834 YARS2Q9Y2Z4 477 aaKnown RBP8.57□□□□□ -1.04
HDDC3-204ENST00000559834 VWA7Q9Y334 891 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 NEU2Q9Y3R4 380 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 JRKLQ9Y4A0 524 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 MMACHCQ9Y4U1 282 aa8.57□□□□□ -1.04
HDDC3-204ENST00000559834 C2CD3Q4AC94 2353 aa8.56□□□□□ -1.04
HDDC3-204ENST00000559834 CACNA1CQ13936 2221 aa8.56□□□□□ -1.04
HDDC3-204ENST00000559834 A0A088AWK7 358 aa8.56□□□□□ -1.04
HDDC3-204ENST00000559834 TRBV11-1A0A0K0K1C0 115 aa8.56□□□□□ -1.04
HDDC3-204ENST00000559834 GOLGA6L10A0A0M3HER8 536 aa8.56□□□□□ -1.04
HDDC3-204ENST00000559834 SYNDIG1LA6NDD5 238 aa8.56□□□□□ -1.04
HDDC3-204ENST00000559834 ZNHIT1O43257 154 aa8.56□□□□□ -1.04
HDDC3-204ENST00000559834 HS6ST1O60243 411 aa8.56□□□□□ -1.04
HDDC3-204ENST00000559834 ITGA10O75578 1167 aa8.56□□□□□ -1.04
HDDC3-204ENST00000559834 ZFAND5O76080 213 aa8.56□□□□□ -1.04
HDDC3-204ENST00000559834 PDE9AO76083 593 aa8.56□□□□□ -1.04
HDDC3-204ENST00000559834 MYO1DO94832 1006 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms