RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 PPCDCQ96CD2 204 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 TM4SF18Q96CE8 201 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 SPACA7Q96KW9 195 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 EFHD1Q9BUP0 239 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 LRRC61Q9BV99 259 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 VCX3BQ9H321 246 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 RPF2Q9H7B2 306 aaKnown RBP12.11□□□□□ -0.47
USP3-213ENST00000559711 GORASP2Q9H8Y8 452 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 COPS7BQ9H9Q2 264 aaPredicted RBP12.11□□□□□ -0.47
USP3-213ENST00000559711 TM9SF3Q9HD45 589 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 ELOVL7A1L3X0 281 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 OR2A25A4D2G3 310 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 OR6C74A6NCV1 312 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 EVPLLA8MZ36 301 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 FAM220BPB1ANY3 271 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 CLIC1O00299 241 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 GPR37L1O60883 481 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 DCNP07585 359 aaKnown RBP12.1□□□□□ -0.47
USP3-213ENST00000559711 HOXB3P14651 431 aaPredicted RBP12.1□□□□□ -0.47
USP3-213ENST00000559711 UGT2B7P16662 529 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 GPX2P18283 190 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 MAOBP27338 520 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 MAPK12P53778 367 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 RPS15AP62244 130 aaKnown RBP12.1□□□□□ -0.47
USP3-213ENST00000559711 RELAQ04206 551 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 KLC1Q07866 573 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 TRIP10Q15642 601 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 MPEG1Q2M385 716 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 MTX3Q5HYI7 312 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 ZNF621Q6ZSS3 439 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 GPR155Q7Z3F1 870 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 KBTBD2Q8IY47 623 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 PAPD5Q8NDF8 572 aaKnown RBP12.1□□□□□ -0.47
USP3-213ENST00000559711 FAM46DQ8NEK8 389 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 ZNF764Q96H86 408 aaPredicted RBP12.1□□□□□ -0.47
USP3-213ENST00000559711 NSMCE2Q96MF7 247 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 KLHL4Q9C0H6 718 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 ACTR10Q9NZ32 417 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 ANKMY1Q9P2S6 941 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 SPASTQ9UBP0 616 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 A0A0A6YYD5 115 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 ARHGAP10A1A4S6 786 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 C1orf226A1L170 272 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 EPN2O95208 641 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 CPSF4O95639 269 aaKnown RBP12.1□□□□□ -0.47
USP3-213ENST00000559711 SERPIND1P05546 499 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 ENGP17813 658 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 POLR2CP19387 275 aaPredicted RBP12.1□□□□□ -0.47
USP3-213ENST00000559711 DDCP20711 480 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 IL10P22301 178 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 PSMA4P25789 261 aaKnown RBP12.1□□□□□ -0.47
USP3-213ENST00000559711 PEX2P28328 305 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 ELOCQ15369 112 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 LPCAT4Q643R3 524 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 FBXO42Q6P3S6 717 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 TMEM26Q6ZUK4 368 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 ZNF551Q7Z340 670 aaPredicted RBP12.1□□□□□ -0.47
USP3-213ENST00000559711 SERPINA11Q86U17 422 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 TICAM1Q8IUC6 712 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 SFTPA2Q8IWL1 248 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 MICU2Q8IYU8 434 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 C10orf111Q8N326 155 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 NATD1Q8N6N6 113 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 FAM47BQ8NA70 645 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 ADCY4Q8NFM4 1077 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 ZDHHC1Q8WTX9 485 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 DNASE2BQ8WZ79 361 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 MS4A6EQ96DS6 147 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 FAM120BQ96EK7 910 aaKnown RBP12.1□□□□□ -0.47
USP3-213ENST00000559711 REXO5Q96IC2 774 aaKnown RBP12.1□□□□□ -0.47
USP3-213ENST00000559711 HSPA12BQ96MM6 686 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 TEFMQ96QE5 360 aaKnown RBP12.1□□□□□ -0.47
USP3-213ENST00000559711 ZNF184Q99676 751 aaPredicted RBP12.1□□□□□ -0.47
USP3-213ENST00000559711 KLHL31Q9H511 634 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 SYNPO2LQ9H987 977 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 KLHL20Q9Y2M5 609 aa12.1□□□□□ -0.47
USP3-213ENST00000559711 C2orf74A8MZ97 194 aa12.09□□□□□ -0.47
USP3-213ENST00000559711 ZW10O43264 779 aa12.09□□□□□ -0.47
USP3-213ENST00000559711 HNRNPRO43390 633 aaKnown RBP12.09□□□□□ -0.47
USP3-213ENST00000559711 TMPRSS11DO60235 418 aa12.09□□□□□ -0.47
USP3-213ENST00000559711 GMNNO75496 209 aa12.09□□□□□ -0.47
USP3-213ENST00000559711 SCELO95171 688 aa12.09□□□□□ -0.47
USP3-213ENST00000559711 ANXA6P08133 673 aa12.09□□□□□ -0.47
USP3-213ENST00000559711 BCKDHBP21953 392 aa12.09□□□□□ -0.47
USP3-213ENST00000559711 PPIBP23284 216 aaKnown RBP12.09□□□□□ -0.47
USP3-213ENST00000559711 HOXA6P31267 233 aa12.09□□□□□ -0.47
USP3-213ENST00000559711 TSFMP43897 325 aaKnown RBP12.09□□□□□ -0.47
USP3-213ENST00000559711 PLA2G16P53816 162 aa12.09□□□□□ -0.47
USP3-213ENST00000559711 POLE2P56282 527 aa12.09□□□□□ -0.47
USP3-213ENST00000559711 NXPH1P58417 271 aa12.09□□□□□ -0.47
USP3-213ENST00000559711 MAP7Q14244 749 aa12.09□□□□□ -0.47
USP3-213ENST00000559711 HEPACAMQ14CZ8 416 aa12.09□□□□□ -0.47
USP3-213ENST00000559711 TAF11Q15544 211 aa12.09□□□□□ -0.47
USP3-213ENST00000559711 CYP51A1Q16850 503 aa12.09□□□□□ -0.47
USP3-213ENST00000559711 SLC5A12Q1EHB4 618 aa12.09□□□□□ -0.47
USP3-213ENST00000559711 PRSS53Q2L4Q9 553 aa12.09□□□□□ -0.47
USP3-213ENST00000559711 ABHD17CQ6PCB6 329 aa12.09□□□□□ -0.47
USP3-213ENST00000559711 VN1R4Q7Z5H5 301 aa12.09□□□□□ -0.47
USP3-213ENST00000559711 SRFBP1Q8NEF9 429 aaKnown RBP12.09□□□□□ -0.47
USP3-213ENST00000559711 OR2L5Q8NG80 312 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms