RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 HIST1H2ADP20671 130 aa12.26□□□□□ -0.45
TPM1-220ENST00000559556 GABRB3P28472 473 aa12.26□□□□□ -0.45
TPM1-220ENST00000559556 TRHRP34981 398 aaPredicted RBP12.26□□□□□ -0.45
TPM1-220ENST00000559556 AHRP35869 848 aa12.26□□□□□ -0.45
TPM1-220ENST00000559556 CYB561P49447 251 aa12.26□□□□□ -0.45
TPM1-220ENST00000559556 MLF1P58340 268 aa12.26□□□□□ -0.45
TPM1-220ENST00000559556 OLR1P78380 273 aa12.26□□□□□ -0.45
TPM1-220ENST00000559556 HSF1Q00613 529 aa12.26□□□□□ -0.45
TPM1-220ENST00000559556 RGS1Q08116 209 aa12.26□□□□□ -0.45
TPM1-220ENST00000559556 KIAA0408Q6ZU52 694 aa12.26□□□□□ -0.45
TPM1-220ENST00000559556 ABHD13Q7L211 337 aa12.26□□□□□ -0.45
TPM1-220ENST00000559556 FGD2Q7Z6J4 655 aa12.26□□□□□ -0.45
TPM1-220ENST00000559556 PPIL6Q8IXY8 311 aa12.26□□□□□ -0.45
TPM1-220ENST00000559556 EID3Q8N140 333 aa12.26□□□□□ -0.45
TPM1-220ENST00000559556 TBC1D19Q8N5T2 526 aa12.26□□□□□ -0.45
TPM1-220ENST00000559556 POGLUT1Q8NBL1 392 aa12.26□□□□□ -0.45
TPM1-220ENST00000559556 GABPB2Q8TAK5 448 aaPredicted RBP12.26□□□□□ -0.45
TPM1-220ENST00000559556 NEIL2Q969S2 332 aa12.26□□□□□ -0.45
TPM1-220ENST00000559556 FBXL8Q96CD0 374 aa12.26□□□□□ -0.45
TPM1-220ENST00000559556 HIST1H2AHQ96KK5 128 aa12.26□□□□□ -0.45
TPM1-220ENST00000559556 HIST1H2AJQ99878 128 aa12.26□□□□□ -0.45
TPM1-220ENST00000559556 H2AFJQ9BTM1 129 aa12.26□□□□□ -0.45
TPM1-220ENST00000559556 SLC6A16Q9GZN6 736 aa12.26□□□□□ -0.45
TPM1-220ENST00000559556 ENKD1Q9H0I2 346 aa12.26□□□□□ -0.45
TPM1-220ENST00000559556 SPNS1Q9H2V7 528 aa12.26□□□□□ -0.45
TPM1-220ENST00000559556 CLK4Q9HAZ1 481 aaKnown RBP12.26□□□□□ -0.45
TPM1-220ENST00000559556 ARL15Q9NXU5 204 aa12.26□□□□□ -0.45
TPM1-220ENST00000559556 ZFP69BQ9UJL9 534 aa12.26□□□□□ -0.45
TPM1-220ENST00000559556 PABPN1LA6NDY0 278 aaKnown RBP12.25□□□□□ -0.45
TPM1-220ENST00000559556 FCHO1O14526 889 aa12.25□□□□□ -0.45
TPM1-220ENST00000559556 PRRG2O14669 202 aa12.25□□□□□ -0.45
TPM1-220ENST00000559556 ZNHIT1O43257 154 aa12.25□□□□□ -0.45
TPM1-220ENST00000559556 B4GALT2O60909 372 aa12.25□□□□□ -0.45
TPM1-220ENST00000559556 DNAJB6O75190 326 aa12.25□□□□□ -0.45
TPM1-220ENST00000559556 TTC4O95801 387 aa12.25□□□□□ -0.45
TPM1-220ENST00000559556 B3GALT4O96024 378 aa12.25□□□□□ -0.45
TPM1-220ENST00000559556 AHSGP02765 367 aa12.25□□□□□ -0.45
TPM1-220ENST00000559556 ENO2P09104 434 aaPredicted RBP12.25□□□□□ -0.45
TPM1-220ENST00000559556 RNH1P13489 461 aaKnown RBP12.25□□□□□ -0.45
TPM1-220ENST00000559556 CAPN3P20807 821 aa12.25□□□□□ -0.45
TPM1-220ENST00000559556 MAOAP21397 527 aa12.25□□□□□ -0.45
TPM1-220ENST00000559556 PTGER1P34995 402 aa12.25□□□□□ -0.45
TPM1-220ENST00000559556 SCTRP47872 440 aa12.25□□□□□ -0.45
TPM1-220ENST00000559556 HLCSP50747 726 aa12.25□□□□□ -0.45
TPM1-220ENST00000559556 ITGA8P53708 1063 aa12.25□□□□□ -0.45
TPM1-220ENST00000559556 IL2P60568 153 aa12.25□□□□□ -0.45
TPM1-220ENST00000559556 BTG2P78543 158 aa12.25□□□□□ -0.45
TPM1-220ENST00000559556 REEP5Q00765 189 aa12.25□□□□□ -0.45
TPM1-220ENST00000559556 HYAL2Q12891 473 aa12.25□□□□□ -0.45
TPM1-220ENST00000559556 TESK1Q15569 626 aa12.25□□□□□ -0.45
TPM1-220ENST00000559556 CATSPEREQ5SY80 951 aa12.25□□□□□ -0.45
TPM1-220ENST00000559556 RNASEH2BQ5TBB1 312 aaKnown RBP12.25□□□□□ -0.45
TPM1-220ENST00000559556 CEP97Q8IW35 865 aa12.25□□□□□ -0.45
TPM1-220ENST00000559556 NFAM1Q8NET5 270 aaPredicted RBP12.25□□□□□ -0.45
TPM1-220ENST00000559556 UTP15Q8TED0 518 aaKnown RBP12.25□□□□□ -0.45
TPM1-220ENST00000559556 ATL1Q8WXF7 558 aa12.25□□□□□ -0.45
TPM1-220ENST00000559556 TMEM125Q96AQ2 219 aa12.25□□□□□ -0.45
TPM1-220ENST00000559556 MS4A14Q96JA4 679 aa12.25□□□□□ -0.45
TPM1-220ENST00000559556 PBKQ96KB5 322 aa12.25□□□□□ -0.45
TPM1-220ENST00000559556 PTCHD1Q96NR3 888 aa12.25□□□□□ -0.45
TPM1-220ENST00000559556 NAP1L3Q99457 506 aaPredicted RBP12.25□□□□□ -0.45
TPM1-220ENST00000559556 CORO1CQ9ULV4 474 aaPredicted RBP12.25□□□□□ -0.45
TPM1-220ENST00000559556 KLF13Q9Y2Y9 288 aaPredicted RBP12.25□□□□□ -0.45
TPM1-220ENST00000559556 CTAGE15A4D2H0 777 aa12.24□□□□□ -0.45
TPM1-220ENST00000559556 C4orf51C9J302 202 aa12.24□□□□□ -0.45
TPM1-220ENST00000559556 PGRMC1O00264 195 aaKnown RBP12.24□□□□□ -0.45
TPM1-220ENST00000559556 SERPIND1P05546 499 aa12.24□□□□□ -0.45
TPM1-220ENST00000559556 SMIM10L1P0DMW3 83 aa12.24□□□□□ -0.45
TPM1-220ENST00000559556 FNTAP49354 379 aa12.24□□□□□ -0.45
TPM1-220ENST00000559556 KRTAP10-9P60411 292 aa12.24□□□□□ -0.45
TPM1-220ENST00000559556 PDAP1Q13442 181 aaKnown RBP12.24□□□□□ -0.45
TPM1-220ENST00000559556 CSHL1Q14406 222 aa12.24□□□□□ -0.45
TPM1-220ENST00000559556 TERF2Q15554 542 aa12.24□□□□□ -0.45
TPM1-220ENST00000559556 SPANXN3Q5MJ09 141 aa12.24□□□□□ -0.45
TPM1-220ENST00000559556 SBSNQ6UWP8 590 aa12.24□□□□□ -0.45
TPM1-220ENST00000559556 C3P1Q6ZMU1 363 aa12.24□□□□□ -0.45
TPM1-220ENST00000559556 CTAGE6Q86UF2 777 aa12.24□□□□□ -0.45
TPM1-220ENST00000559556 CYP4X1Q8N118 509 aa12.24□□□□□ -0.45
TPM1-220ENST00000559556 ANKRD53Q8N9V6 530 aa12.24□□□□□ -0.45
TPM1-220ENST00000559556 APCDD1LQ8NCL9 501 aa12.24□□□□□ -0.45
TPM1-220ENST00000559556 TRPV3Q8NET8 790 aa12.24□□□□□ -0.45
TPM1-220ENST00000559556 GRK7Q8WTQ7 553 aa12.24□□□□□ -0.45
TPM1-220ENST00000559556 SLC5A11Q8WWX8 675 aa12.24□□□□□ -0.45
TPM1-220ENST00000559556 CERS2Q96G23 380 aa12.24□□□□□ -0.45
TPM1-220ENST00000559556 SMIM10Q96HG1 83 aa12.24□□□□□ -0.45
TPM1-220ENST00000559556 TSNARE1Q96NA8 513 aa12.24□□□□□ -0.45
TPM1-220ENST00000559556 NAT9Q9BTE0 207 aa12.24□□□□□ -0.45
TPM1-220ENST00000559556 TRIM54Q9BYV2 358 aa12.24□□□□□ -0.45
TPM1-220ENST00000559556 PELI2Q9HAT8 420 aa12.24□□□□□ -0.45
TPM1-220ENST00000559556 MCCC2Q9HCC0 563 aa12.24□□□□□ -0.45
TPM1-220ENST00000559556 PRDM9Q9NQV7 894 aa12.24□□□□□ -0.45
TPM1-220ENST00000559556 PPT2Q9UMR5 302 aa12.24□□□□□ -0.45
TPM1-220ENST00000559556 KIAA1549Q9HCM3 1950 aa12.23□□□□□ -0.45
TPM1-220ENST00000559556 URADA6NGE7 173 aa12.23□□□□□ -0.45
TPM1-220ENST00000559556 TFECO14948 347 aaPredicted RBP12.23□□□□□ -0.45
TPM1-220ENST00000559556 BANF1O75531 89 aa12.23□□□□□ -0.45
TPM1-220ENST00000559556 IGFBP2P18065 325 aa12.23□□□□□ -0.45
TPM1-220ENST00000559556 MEOX1P50221 254 aa12.23□□□□□ -0.45
TPM1-220ENST00000559556 CCZ1BP86790 482 aa12.23□□□□□ -0.45
TPM1-220ENST00000559556 CCZ1P86791 482 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms