RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 SLC6A12P48065 614 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 HNMTP50135 292 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 PLA2G16P53816 162 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 BTN3A2P78410 334 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 CDKL1Q00532 357 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 SRSF11Q05519 484 aaKnown RBP11.34□□□□□ -0.59
TPM1-216ENST00000558910 DDX39BQ13838 428 aaKnown RBP11.34□□□□□ -0.59
TPM1-216ENST00000558910 FAM53BQ14153 422 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 PLEKHN1Q494U1 663 aaPredicted RBP11.34□□□□□ -0.59
TPM1-216ENST00000558910 B3GNTL1Q67FW5 361 aaPredicted RBP11.34□□□□□ -0.59
TPM1-216ENST00000558910 SLC6A19Q695T7 634 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 FCRLBQ6BAA4 426 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 SULT1C3Q6IMI6 304 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 JMJD6Q6NYC1 403 aaPredicted RBP11.34□□□□□ -0.59
TPM1-216ENST00000558910 ZADH2Q8N4Q0 377 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 CISD2Q8N5K1 135 aaKnown RBP11.34□□□□□ -0.59
TPM1-216ENST00000558910 OR4K1Q8NGD4 311 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 CPT1CQ8TCG5 803 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 BRIX1Q8TDN6 353 aaKnown RBP11.34□□□□□ -0.59
TPM1-216ENST00000558910 KIAA1191Q96A73 305 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 C19orf60Q96EN9 201 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 MVB12AQ96EY5 273 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 VPS50Q96JG6 964 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 PAFAH2Q99487 392 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 PHACTR1Q9C0D0 580 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 LHPPQ9H008 270 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 CLMPQ9H6B4 373 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 NMRAL1Q9HBL8 299 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 ZFP69BQ9UJL9 534 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 ACOT9Q9Y305 439 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 ANGPTL3Q9Y5C1 460 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 SCN2AQ99250 2005 aa11.34□□□□□ -0.59
TPM1-216ENST00000558910 H0YIG0 161 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 SAP18O00422 153 aaKnown RBP11.33□□□□□ -0.6
TPM1-216ENST00000558910 HPP00738 406 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 IL2RAP01589 272 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 ECHS1P30084 290 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 MSH2P43246 934 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 UQCRFS1P47985 274 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 CSRP3P50461 194 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 IRF8Q02556 426 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 RELAQ04206 551 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 ACTN3Q08043 901 aaPredicted RBP11.33□□□□□ -0.6
TPM1-216ENST00000558910 POU4F2Q12837 409 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 HYAL2Q12891 473 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 CHIT1Q13231 466 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 NAB1Q13506 487 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 DOC2AQ14183 400 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 HERC3Q15034 1050 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 PDK4Q16654 411 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 PFKFB4Q16877 469 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 OXLD1Q5BKU9 147 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 TEX35Q5T0J7 233 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 AGAP7PQ5VUJ5 663 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 ATG9BQ674R7 924 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 TMIGD1Q6UXZ0 262 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 SLCO4C1Q6ZQN7 724 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 CYS1Q717R9 158 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 ABHD13Q7L211 337 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 NDUFAF7Q7L592 441 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 ISCA2Q86U28 154 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 KBTBD2Q8IY47 623 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 RNF175Q8N4F7 328 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 TEX9Q8N6V9 391 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 DNAJB14Q8TBM8 379 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 STAG3L4Q8TBR4 150 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 UTP15Q8TED0 518 aaKnown RBP11.33□□□□□ -0.6
TPM1-216ENST00000558910 FAR2Q96K12 515 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 AGAP4Q96P64 663 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 SMAD5Q99717 465 aaKnown RBP11.33□□□□□ -0.6
TPM1-216ENST00000558910 GRIP2Q9C0E4 1043 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 AICDAQ9GZX7 198 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 ACSS3Q9H6R3 686 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 CNOT10Q9H9A5 744 aaKnown RBP11.33□□□□□ -0.6
TPM1-216ENST00000558910 MLXIPLQ9NP71 852 aa11.33□□□□□ -0.6
TPM1-216ENST00000558910 IGLV3-12A0A075B6K2 115 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 A0A087X1B8 175 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 IGHV1-45A0A0A0MS14 117 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 HMX2A2RU54 273 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 ANKDD1BA6NHY2 528 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 PSMD12O00232 456 aaPredicted RBP11.32□□□□□ -0.6
TPM1-216ENST00000558910 ERI3O43414 337 aaKnown RBP11.32□□□□□ -0.6
TPM1-216ENST00000558910 GALR3O60755 368 aaPredicted RBP11.32□□□□□ -0.6
TPM1-216ENST00000558910 PRAMEF4O60810 478 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 FAM153BP0C7A2 387 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 ITGAMP11215 1152 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 GNLYP22749 145 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 HNRNPH1P31943 449 aaKnown RBP11.32□□□□□ -0.6
TPM1-216ENST00000558910 SERPINB8P50452 374 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 BTG2P78543 158 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 PWP1Q13610 501 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 ABRAXAS2Q15018 415 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 PCOLCEQ15113 449 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 INPP5JQ15735 1006 aaPredicted RBP11.32□□□□□ -0.6
TPM1-216ENST00000558910 NSDHLQ15738 373 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 FAM83EQ2M2I3 478 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 BTBD16Q32M84 506 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 FAM153CQ494X1 144 aa11.32□□□□□ -0.6
TPM1-216ENST00000558910 GLE1Q53GS7 698 aaKnown RBP11.32□□□□□ -0.6
TPM1-216ENST00000558910 RNFT1Q5M7Z0 435 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms