RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 DIO3P55073 304 aa14.16□□□□□ -0.14
VPS18-202ENST00000558474 CLDN8P56748 225 aa14.16□□□□□ -0.14
VPS18-202ENST00000558474 VSX2P58304 361 aaPredicted RBP14.16□□□□□ -0.14
VPS18-202ENST00000558474 RAE1P78406 368 aaKnown RBP14.16□□□□□ -0.14
VPS18-202ENST00000558474 NHLH1Q02575 133 aa14.16□□□□□ -0.14
VPS18-202ENST00000558474 ZNF763Q0D2J5 394 aa14.16□□□□□ -0.14
VPS18-202ENST00000558474 KLF10Q13118 480 aa14.16□□□□□ -0.14
VPS18-202ENST00000558474 FAM53BQ14153 422 aa14.16□□□□□ -0.14
VPS18-202ENST00000558474 GRM7Q14831 915 aa14.16□□□□□ -0.14
VPS18-202ENST00000558474 HERC3Q15034 1050 aa14.16□□□□□ -0.14
VPS18-202ENST00000558474 FAM214AQ32MH5 1076 aa14.16□□□□□ -0.14
VPS18-202ENST00000558474 WASHC2DQ5SRD0 308 aa14.16□□□□□ -0.14
VPS18-202ENST00000558474 TLDC1Q6P9B6 456 aa14.16□□□□□ -0.14
VPS18-202ENST00000558474 RBM44Q6ZP01 1051 aaKnown RBP14.16□□□□□ -0.14
VPS18-202ENST00000558474 TMPRSS9Q7Z410 1059 aa14.16□□□□□ -0.14
VPS18-202ENST00000558474 UBE3DQ7Z6J8 389 aa14.16□□□□□ -0.14
VPS18-202ENST00000558474 LIX1Q8N485 282 aa14.16□□□□□ -0.14
VPS18-202ENST00000558474 UTP15Q8TED0 518 aaKnown RBP14.16□□□□□ -0.14
VPS18-202ENST00000558474 CMTM5Q96DZ9 223 aa14.16□□□□□ -0.14
VPS18-202ENST00000558474 CCDC74BQ96LY2 380 aa14.16□□□□□ -0.14
VPS18-202ENST00000558474 C1orf50Q9BV19 199 aa14.16□□□□□ -0.14
VPS18-202ENST00000558474 ZNF717Q9BY31 904 aaPredicted RBP14.16□□□□□ -0.14
VPS18-202ENST00000558474 SYNPO2LQ9H987 977 aa14.16□□□□□ -0.14
VPS18-202ENST00000558474 PRDM7Q9NQW5 492 aa14.16□□□□□ -0.14
VPS18-202ENST00000558474 SERTAD3Q9UJW9 196 aa14.16□□□□□ -0.14
VPS18-202ENST00000558474 POLR3HQ9Y535 204 aaPredicted RBP14.16□□□□□ -0.14
VPS18-202ENST00000558474 OTOGLQ3ZCN5 2332 aa14.16□□□□□ -0.14
VPS18-202ENST00000558474 COL27A1Q8IZC6 1860 aaPredicted RBP14.16□□□□□ -0.14
VPS18-202ENST00000558474 DMDP11532 3685 aa14.16□□□□□ -0.14
VPS18-202ENST00000558474 ASCC3Q8N3C0 2202 aaKnown RBP14.15□□□□□ -0.14
VPS18-202ENST00000558474 H3BMH7 237 aa14.15□□□□□ -0.14
VPS18-202ENST00000558474 ANKRD28O15084 1053 aa14.15□□□□□ -0.14
VPS18-202ENST00000558474 P2RX6O15547 441 aa14.15□□□□□ -0.14
VPS18-202ENST00000558474 GDF9O60383 454 aa14.15□□□□□ -0.14
VPS18-202ENST00000558474 EIF2S1P05198 315 aaKnown RBP14.15□□□□□ -0.14
VPS18-202ENST00000558474 DDX5P17844 614 aaKnown RBP14.15□□□□□ -0.14
VPS18-202ENST00000558474 ALOX12P18054 663 aa14.15□□□□□ -0.14
VPS18-202ENST00000558474 HIST1H1TP22492 207 aaPredicted RBP14.15□□□□□ -0.14
VPS18-202ENST00000558474 TPP2P29144 1249 aaPredicted RBP14.15□□□□□ -0.14
VPS18-202ENST00000558474 SSR2P43308 183 aa14.15□□□□□ -0.14
VPS18-202ENST00000558474 UBAP2LQ14157 1087 aaKnown RBP14.15□□□□□ -0.14
VPS18-202ENST00000558474 TRIP6Q15654 476 aaKnown RBP14.15□□□□□ -0.14
VPS18-202ENST00000558474 DPY19L1Q2PZI1 675 aa14.15□□□□□ -0.14
VPS18-202ENST00000558474 SNAP47Q5SQN1 464 aa14.15□□□□□ -0.14
VPS18-202ENST00000558474 CCNYL2Q5T2Q4 361 aa14.15□□□□□ -0.14
VPS18-202ENST00000558474 ASCL5Q7RTU5 278 aa14.15□□□□□ -0.14
VPS18-202ENST00000558474 YTHDF3Q7Z739 585 aaKnown RBP14.15□□□□□ -0.14
VPS18-202ENST00000558474 GPR135Q8IZ08 494 aa14.15□□□□□ -0.14
VPS18-202ENST00000558474 ARHGEF39Q8N4T4 335 aa14.15□□□□□ -0.14
VPS18-202ENST00000558474 TTC29Q8NA56 475 aaPredicted RBP14.15□□□□□ -0.14
VPS18-202ENST00000558474 KCT2Q8NC54 265 aa14.15□□□□□ -0.14
VPS18-202ENST00000558474 RP9Q8TA86 221 aaKnown RBP14.15□□□□□ -0.14
VPS18-202ENST00000558474 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.15□□□□□ -0.14
VPS18-202ENST00000558474 NETO1Q8TDF5 533 aa14.15□□□□□ -0.14
VPS18-202ENST00000558474 MTERF3Q96E29 417 aa14.15□□□□□ -0.14
VPS18-202ENST00000558474 SERINC2Q96SA4 455 aa14.15□□□□□ -0.14
VPS18-202ENST00000558474 ZBTB18Q99592 522 aa14.15□□□□□ -0.14
VPS18-202ENST00000558474 C17orf62Q9BQA9 187 aa14.15□□□□□ -0.14
VPS18-202ENST00000558474 NPLQ9BXD5 320 aaPredicted RBP14.15□□□□□ -0.14
VPS18-202ENST00000558474 DPY30Q9C005 99 aa14.15□□□□□ -0.14
VPS18-202ENST00000558474 AICDAQ9GZX7 198 aa14.15□□□□□ -0.14
VPS18-202ENST00000558474 KLHL31Q9H511 634 aa14.15□□□□□ -0.14
VPS18-202ENST00000558474 SYNDIG1Q9H7V2 258 aa14.15□□□□□ -0.14
VPS18-202ENST00000558474 COPS7BQ9H9Q2 264 aaPredicted RBP14.15□□□□□ -0.14
VPS18-202ENST00000558474 MYNNQ9NPC7 610 aa14.15□□□□□ -0.14
VPS18-202ENST00000558474 LHX9Q9NQ69 397 aa14.15□□□□□ -0.14
VPS18-202ENST00000558474 PRDM9Q9NQV7 894 aa14.15□□□□□ -0.14
VPS18-202ENST00000558474 LYARQ9NX58 379 aaKnown RBP14.15□□□□□ -0.14
VPS18-202ENST00000558474 DLGAP4Q9Y2H0 992 aa14.15□□□□□ -0.14
VPS18-202ENST00000558474 GPR179Q6PRD1 2367 aa14.15□□□□□ -0.14
VPS18-202ENST00000558474 A0A0A6YYD5 115 aa14.14□□□□□ -0.15
VPS18-202ENST00000558474 GNG14A0A1W2PPG7 69 aa14.14□□□□□ -0.15
VPS18-202ENST00000558474 A8MU76 341 aa14.14□□□□□ -0.15
VPS18-202ENST00000558474 SAP18O00422 153 aaKnown RBP14.14□□□□□ -0.15
VPS18-202ENST00000558474 HNRNPCL1O60812 293 aaKnown RBP14.14□□□□□ -0.15
VPS18-202ENST00000558474 ATP5HO75947 161 aa14.14□□□□□ -0.15
VPS18-202ENST00000558474 KLK1P06870 262 aa14.14□□□□□ -0.15
VPS18-202ENST00000558474 ZNF888P0CJ79 500 aaPredicted RBP14.14□□□□□ -0.15
VPS18-202ENST00000558474 ATP5A1P25705 553 aaKnown RBP14.14□□□□□ -0.15
VPS18-202ENST00000558474 PIK3R1P27986 724 aa14.14□□□□□ -0.15
VPS18-202ENST00000558474 CSTF2P33240 577 aaKnown RBP eCLIP14.14□□□□□ -0.15
VPS18-202ENST00000558474 MNAT1P51948 309 aa14.14□□□□□ -0.15
VPS18-202ENST00000558474 PLA2G16P53816 162 aa14.14□□□□□ -0.15
VPS18-202ENST00000558474 ARSFP54793 590 aa14.14□□□□□ -0.15
VPS18-202ENST00000558474 MTTPP55157 894 aa14.14□□□□□ -0.15
VPS18-202ENST00000558474 ITGA1P56199 1179 aa14.14□□□□□ -0.15
VPS18-202ENST00000558474 SLC9A5Q14940 896 aa14.14□□□□□ -0.15
VPS18-202ENST00000558474 HKDC1Q2TB90 917 aa14.14□□□□□ -0.15
VPS18-202ENST00000558474 DEFB110Q30KQ9 67 aa14.14□□□□□ -0.15
VPS18-202ENST00000558474 CDCP2Q5VXM1 449 aa14.14□□□□□ -0.15
VPS18-202ENST00000558474 MRM1Q6IN84 353 aaKnown RBP14.14□□□□□ -0.15
VPS18-202ENST00000558474 R3HCC1LQ7Z5L2 792 aaKnown RBP14.14□□□□□ -0.15
VPS18-202ENST00000558474 CACTIN-AS1Q8N1I8 211 aa14.14□□□□□ -0.15
VPS18-202ENST00000558474 AGBL5Q8NDL9 886 aa14.14□□□□□ -0.15
VPS18-202ENST00000558474 PROKR1Q8TCW9 393 aa14.14□□□□□ -0.15
VPS18-202ENST00000558474 TESCQ96BS2 214 aa14.14□□□□□ -0.15
VPS18-202ENST00000558474 ZNF501Q96CX3 271 aaPredicted RBP14.14□□□□□ -0.15
VPS18-202ENST00000558474 MVB12AQ96EY5 273 aa14.14□□□□□ -0.15
VPS18-202ENST00000558474 ZNF764Q96H86 408 aaPredicted RBP14.14□□□□□ -0.15
VPS18-202ENST00000558474 MS4A12Q9NXJ0 267 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms