RNA–Protein interactions for RNA: ENST00000558131.1

RPL28-205, Transcript of ribosomal protein L28, humanhuman

TSL 5 BASIC

Gene RPL28, Length 444 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-205ENST00000558131 RAB8AP61006 207 aa15.3■□□□□ 0.04
RPL28-205ENST00000558131 HSF1Q00613 529 aa15.3■□□□□ 0.04
RPL28-205ENST00000558131 RBPJQ06330 500 aa15.3■□□□□ 0.04
RPL28-205ENST00000558131 GTF3C1Q12789 2109 aa15.3■□□□□ 0.04
RPL28-205ENST00000558131 FASTKD3Q14CZ7 662 aaKnown RBP15.3■□□□□ 0.04
RPL28-205ENST00000558131 MORF4L2Q15014 288 aa15.3■□□□□ 0.04
RPL28-205ENST00000558131 TMPRSS11BQ86T26 416 aa15.3■□□□□ 0.04
RPL28-205ENST00000558131 THOC6Q86W42 341 aaKnown RBP15.3■□□□□ 0.04
RPL28-205ENST00000558131 KLHDC8AQ8IYD2 350 aa15.3■□□□□ 0.04
RPL28-205ENST00000558131 CA13Q8N1Q1 262 aa15.3■□□□□ 0.04
RPL28-205ENST00000558131 TMEM178AQ8NBL3 297 aa15.3■□□□□ 0.04
RPL28-205ENST00000558131 APCDD1LQ8NCL9 501 aa15.3■□□□□ 0.04
RPL28-205ENST00000558131 ANKRD49Q8WVL7 239 aa15.3■□□□□ 0.04
RPL28-205ENST00000558131 ATL1Q8WXF7 558 aa15.3■□□□□ 0.04
RPL28-205ENST00000558131 LRFN1Q9P244 771 aa15.3■□□□□ 0.04
RPL28-205ENST00000558131 ZNF223Q9UK11 482 aaPredicted RBP15.3■□□□□ 0.04
RPL28-205ENST00000558131 SLC22A14Q9Y267 594 aa15.3■□□□□ 0.04
RPL28-205ENST00000558131 ASB1Q9Y576 335 aa15.3■□□□□ 0.04
RPL28-205ENST00000558131 PCNX1Q96RV3 2341 aa15.29■□□□□ 0.04
RPL28-205ENST00000558131 NPEPPSL1A6NEC2 478 aa15.29■□□□□ 0.04
RPL28-205ENST00000558131 NPIPA5E9PKD4 350 aa15.29■□□□□ 0.04
RPL28-205ENST00000558131 FAM227AF5H4B4 570 aa15.29■□□□□ 0.04
RPL28-205ENST00000558131 ADAM10O14672 748 aa15.29■□□□□ 0.04
RPL28-205ENST00000558131 NDC80O14777 642 aa15.29■□□□□ 0.04
RPL28-205ENST00000558131 SLC25A12O75746 678 aa15.29■□□□□ 0.04
RPL28-205ENST00000558131 SERPIND1P05546 499 aa15.29■□□□□ 0.04
RPL28-205ENST00000558131 MYBL2P10244 700 aa15.29■□□□□ 0.04
RPL28-205ENST00000558131 CD46P15529 392 aa15.29■□□□□ 0.04
RPL28-205ENST00000558131 TRHRP34981 398 aaPredicted RBP15.29■□□□□ 0.04
RPL28-205ENST00000558131 SLC6A12P48065 614 aa15.29■□□□□ 0.04
RPL28-205ENST00000558131 MLF1P58340 268 aa15.29■□□□□ 0.04
RPL28-205ENST00000558131 ALDH6A1Q02252 535 aaKnown RBP15.29■□□□□ 0.04
RPL28-205ENST00000558131 ACTN3Q08043 901 aaPredicted RBP15.29■□□□□ 0.04
RPL28-205ENST00000558131 RGS1Q08116 209 aa15.29■□□□□ 0.04
RPL28-205ENST00000558131 CSHL1Q14406 222 aa15.29■□□□□ 0.04
RPL28-205ENST00000558131 C18orf21Q32NC0 220 aaPredicted RBP15.29■□□□□ 0.04
RPL28-205ENST00000558131 SLC25A25Q6KCM7 469 aa15.29■□□□□ 0.04
RPL28-205ENST00000558131 MTFR2Q6P444 385 aa15.29■□□□□ 0.04
RPL28-205ENST00000558131 NXPE4Q6UWF7 544 aa15.29■□□□□ 0.04
RPL28-205ENST00000558131 ABHD13Q7L211 337 aa15.29■□□□□ 0.04
RPL28-205ENST00000558131 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.29■□□□□ 0.04
RPL28-205ENST00000558131 ZC3HC1Q86WB0 502 aaKnown RBP15.29■□□□□ 0.04
RPL28-205ENST00000558131 RPS19BP1Q86WX3 136 aaKnown RBP15.29■□□□□ 0.04
RPL28-205ENST00000558131 SPPL2CQ8IUH8 684 aa15.29■□□□□ 0.04
RPL28-205ENST00000558131 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.29■□□□□ 0.04
RPL28-205ENST00000558131 CPSF7Q8N684 471 aaKnown RBP15.29■□□□□ 0.04
RPL28-205ENST00000558131 TMEM52Q8NDY8 209 aa15.29■□□□□ 0.04
RPL28-205ENST00000558131 GABPB2Q8TAK5 448 aaPredicted RBP15.29■□□□□ 0.04
RPL28-205ENST00000558131 PTCHD1Q96NR3 888 aa15.29■□□□□ 0.04
RPL28-205ENST00000558131 PPANQ9NQ55 473 aaKnown RBP15.29■□□□□ 0.04
RPL28-205ENST00000558131 NPIPA1Q9UND3 350 aa15.29■□□□□ 0.04
RPL28-205ENST00000558131 MEMO1Q9Y316 297 aa15.29■□□□□ 0.04
RPL28-205ENST00000558131 CDK2AP1O14519 115 aa15.28■□□□□ 0.04
RPL28-205ENST00000558131 PRMT3O60678 531 aa15.28■□□□□ 0.04
RPL28-205ENST00000558131 AGAP20933 346 aa15.28■□□□□ 0.04
RPL28-205ENST00000558131 HNRNPH1P31943 449 aaKnown RBP15.28■□□□□ 0.04
RPL28-205ENST00000558131 PTGER4P35408 488 aa15.28■□□□□ 0.04
RPL28-205ENST00000558131 HNF4AP41235 474 aa15.28■□□□□ 0.04
RPL28-205ENST00000558131 HNRNPFP52597 415 aaKnown RBP15.28■□□□□ 0.04
RPL28-205ENST00000558131 TAS2R39P59534 338 aa15.28■□□□□ 0.04
RPL28-205ENST00000558131 TAS2R50P59544 299 aa15.28■□□□□ 0.04
RPL28-205ENST00000558131 CDKL1Q00532 357 aa15.28■□□□□ 0.04
RPL28-205ENST00000558131 OC90Q02509 493 aaPredicted RBP15.28■□□□□ 0.04
RPL28-205ENST00000558131 KRTCAP3Q53RY4 240 aa15.28■□□□□ 0.04
RPL28-205ENST00000558131 NIPAL1Q6NVV3 410 aa15.28■□□□□ 0.04
RPL28-205ENST00000558131 CEP97Q8IW35 865 aa15.28■□□□□ 0.04
RPL28-205ENST00000558131 SCUBE1Q8IWY4 988 aa15.28■□□□□ 0.04
RPL28-205ENST00000558131 ZNF295-AS1Q8N0V1 137 aa15.28■□□□□ 0.04
RPL28-205ENST00000558131 PDIK1LQ8N165 341 aa15.28■□□□□ 0.04
RPL28-205ENST00000558131 ACBD4Q8NC06 268 aa15.28■□□□□ 0.04
RPL28-205ENST00000558131 ANKRD7Q92527 254 aa15.28■□□□□ 0.04
RPL28-205ENST00000558131 LRRC39Q96DD0 335 aa15.28■□□□□ 0.04
RPL28-205ENST00000558131 MAGED4Q96JG8 741 aa15.28■□□□□ 0.04
RPL28-205ENST00000558131 PHF12Q96QT6 1004 aa15.28■□□□□ 0.04
RPL28-205ENST00000558131 CLK4Q9HAZ1 481 aaKnown RBP15.28■□□□□ 0.04
RPL28-205ENST00000558131 PRDM9Q9NQV7 894 aa15.28■□□□□ 0.04
RPL28-205ENST00000558131 MOCS1Q9NZB8 636 aa15.28■□□□□ 0.04
RPL28-205ENST00000558131 ZFATQ9P243 1243 aa15.28■□□□□ 0.04
RPL28-205ENST00000558131 OARD1Q9Y530 152 aa15.28■□□□□ 0.04
RPL28-205ENST00000558131 FAM95CA0A1B0GW59 222 aa15.27■□□□□ 0.04
RPL28-205ENST00000558131 USP27XA6NNY8 438 aa15.27■□□□□ 0.04
RPL28-205ENST00000558131 E7ESA3 106 aa15.27■□□□□ 0.04
RPL28-205ENST00000558131 FANCGO15287 622 aa15.27■□□□□ 0.04
RPL28-205ENST00000558131 ASNA1O43681 348 aa15.27■□□□□ 0.04
RPL28-205ENST00000558131 PRAMEF4O60810 478 aa15.27■□□□□ 0.04
RPL28-205ENST00000558131 SEC31AO94979 1220 aaKnown RBP15.27■□□□□ 0.04
RPL28-205ENST00000558131 SERPINA6P08185 405 aa15.27■□□□□ 0.04
RPL28-205ENST00000558131 RNH1P13489 461 aaKnown RBP15.27■□□□□ 0.04
RPL28-205ENST00000558131 GPR143P51810 404 aa15.27■□□□□ 0.04
RPL28-205ENST00000558131 ITGA8P53708 1063 aa15.27■□□□□ 0.04
RPL28-205ENST00000558131 SKP1P63208 163 aa15.27■□□□□ 0.04
RPL28-205ENST00000558131 CBLBQ13191 982 aa15.27■□□□□ 0.04
RPL28-205ENST00000558131 TSNQ15631 228 aaKnown RBP15.27■□□□□ 0.04
RPL28-205ENST00000558131 TOR1AIP1Q5JTV8 583 aa15.27■□□□□ 0.04
RPL28-205ENST00000558131 PRAMEF9Q5VWM5 478 aa15.27■□□□□ 0.04
RPL28-205ENST00000558131 XKRXQ6PP77 449 aa15.27■□□□□ 0.04
RPL28-205ENST00000558131 VN1R5Q7Z5H4 357 aa15.27■□□□□ 0.04
RPL28-205ENST00000558131 CREG2Q8IUH2 290 aa15.27■□□□□ 0.04
RPL28-205ENST00000558131 ANKMY2Q8IV38 441 aa15.27■□□□□ 0.04
RPL28-205ENST00000558131 TRPV3Q8NET8 790 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms