RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 H0YIG0 161 aa13.58□□□□□ -0.24
USP3-205ENST00000557884 H0YIV9 168 aa13.58□□□□□ -0.24
USP3-205ENST00000557884 SAP18O00422 153 aaKnown RBP13.58□□□□□ -0.24
USP3-205ENST00000557884 GALR3O60755 368 aaPredicted RBP13.58□□□□□ -0.24
USP3-205ENST00000557884 OR4F21O95013 312 aa13.58□□□□□ -0.24
USP3-205ENST00000557884 ALBP02768 609 aa13.58□□□□□ -0.24
USP3-205ENST00000557884 UMODP07911 640 aa13.58□□□□□ -0.24
USP3-205ENST00000557884 ALDH3A1P30838 453 aa13.58□□□□□ -0.24
USP3-205ENST00000557884 DNAJB13P59910 316 aa13.58□□□□□ -0.24
USP3-205ENST00000557884 RPS13P62277 151 aaKnown RBP13.58□□□□□ -0.24
USP3-205ENST00000557884 BTN3A2P78410 334 aa13.58□□□□□ -0.24
USP3-205ENST00000557884 OCA2Q04671 838 aa13.58□□□□□ -0.24
USP3-205ENST00000557884 LCP2Q13094 533 aa13.58□□□□□ -0.24
USP3-205ENST00000557884 DEFB109BQ30KR1 87 aa13.58□□□□□ -0.24
USP3-205ENST00000557884 TNFAIP8L3Q5GJ75 292 aa13.58□□□□□ -0.24
USP3-205ENST00000557884 CFAP157Q5JU67 520 aa13.58□□□□□ -0.24
USP3-205ENST00000557884 LIPMQ5VYY2 423 aa13.58□□□□□ -0.24
USP3-205ENST00000557884 TTC19Q6DKK2 380 aaPredicted RBP13.58□□□□□ -0.24
USP3-205ENST00000557884 GPRIN3Q6ZVF9 776 aa13.58□□□□□ -0.24
USP3-205ENST00000557884 GPR155Q7Z3F1 870 aa13.58□□□□□ -0.24
USP3-205ENST00000557884 OR2Y1Q8NGV0 311 aa13.58□□□□□ -0.24
USP3-205ENST00000557884 OR51Q1Q8NH59 317 aa13.58□□□□□ -0.24
USP3-205ENST00000557884 STT3BQ8TCJ2 826 aa13.58□□□□□ -0.24
USP3-205ENST00000557884 GAL3ST3Q96A11 431 aa13.58□□□□□ -0.24
USP3-205ENST00000557884 MIEF2Q96C03 454 aa13.58□□□□□ -0.24
USP3-205ENST00000557884 REPS1Q96D71 796 aa13.58□□□□□ -0.24
USP3-205ENST00000557884 ZNF382Q96SR6 550 aa13.58□□□□□ -0.24
USP3-205ENST00000557884 SPSB2Q99619 263 aa13.58□□□□□ -0.24
USP3-205ENST00000557884 RBCK1Q9BYM8 510 aa13.58□□□□□ -0.24
USP3-205ENST00000557884 KCNK9Q9NPC2 374 aa13.58□□□□□ -0.24
USP3-205ENST00000557884 ZNF282Q9UDV7 671 aaPredicted RBP13.58□□□□□ -0.24
USP3-205ENST00000557884 ZNF225Q9UK10 706 aa13.58□□□□□ -0.24
USP3-205ENST00000557884 MAP4K5Q9Y4K4 846 aa13.58□□□□□ -0.24
USP3-205ENST00000557884 VSTM2BA6NLU5 285 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 RTCAO00442 366 aaKnown RBP13.57□□□□□ -0.24
USP3-205ENST00000557884 JRKO75564 520 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 MLYCDO95822 493 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 ZGLP1P0C6A0 271 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 SMIM10L1P0DMW3 83 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 SERPINB1P30740 379 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 PIK3CBP42338 1070 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 XCR1P46094 333 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 PHEXP78562 749 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 IFT88Q13099 833 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 UGT8Q16880 541 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 ADPRMQ3LIE5 342 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 GGTA1PQ4G0N0 100 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 TCHHL1Q5QJ38 904 aaPredicted RBP13.57□□□□□ -0.24
USP3-205ENST00000557884 FRG2Q64ET8 278 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 TRIM40Q6P9F5 258 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 ZC3H7AQ8IWR0 971 aaKnown RBP13.57□□□□□ -0.24
USP3-205ENST00000557884 CDYL2Q8N8U2 506 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 OR2L5Q8NG80 312 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 WDR20Q8TBZ3 569 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 CMTM7Q96FZ5 175 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 PEX11GQ96HA9 241 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 SMIM10Q96HG1 83 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 FAR2Q96K12 515 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 PKNOX2Q96KN3 472 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 FRG2BQ96QU4 278 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 CRB3Q9BUF7 120 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 GATA5Q9BWX5 397 aaPredicted RBP13.57□□□□□ -0.24
USP3-205ENST00000557884 SORBS1Q9BX66 1292 aaKnown RBP13.57□□□□□ -0.24
USP3-205ENST00000557884 SHCBP1LQ9BZQ2 653 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 FAM117AQ9C073 453 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 STMN4Q9H169 189 aaPredicted RBP13.57□□□□□ -0.24
USP3-205ENST00000557884 SLC26A1Q9H2B4 701 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 ELOVL6Q9H5J4 265 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 WDR54Q9H977 334 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 TMBIM4Q9HC24 238 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 MKKSQ9NPJ1 570 aaPredicted RBP13.57□□□□□ -0.24
USP3-205ENST00000557884 TRPS1Q9UHF7 1281 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 NXT1Q9UKK6 140 aaKnown RBP13.57□□□□□ -0.24
USP3-205ENST00000557884 LHX6Q9UPM6 363 aa13.57□□□□□ -0.24
USP3-205ENST00000557884 IGLV3-12A0A075B6K2 115 aa13.56□□□□□ -0.24
USP3-205ENST00000557884 WDR91A4D1P6 747 aa13.56□□□□□ -0.24
USP3-205ENST00000557884 MAGEB17A8MXT2 336 aa13.56□□□□□ -0.24
USP3-205ENST00000557884 AGPSO00116 658 aa13.56□□□□□ -0.24
USP3-205ENST00000557884 UBFD1O14562 309 aaKnown RBP13.56□□□□□ -0.24
USP3-205ENST00000557884 CHST10O43529 356 aa13.56□□□□□ -0.24
USP3-205ENST00000557884 TRIM13O60858 407 aa13.56□□□□□ -0.24
USP3-205ENST00000557884 CD63P08962 238 aa13.56□□□□□ -0.24
USP3-205ENST00000557884 CERS1P27544 350 aa13.56□□□□□ -0.24
USP3-205ENST00000557884 MAGOHP61326 146 aaKnown RBP13.56□□□□□ -0.24
USP3-205ENST00000557884 SKP1P63208 163 aa13.56□□□□□ -0.24
USP3-205ENST00000557884 KLC1Q07866 573 aa13.56□□□□□ -0.24
USP3-205ENST00000557884 TGM3Q08188 693 aa13.56□□□□□ -0.24
USP3-205ENST00000557884 MPP2Q14168 576 aa13.56□□□□□ -0.24
USP3-205ENST00000557884 MFSD4BQ5TF39 518 aa13.56□□□□□ -0.24
USP3-205ENST00000557884 ABHD17CQ6PCB6 329 aa13.56□□□□□ -0.24
USP3-205ENST00000557884 ZCCHC23Q6ZST2 131 aa13.56□□□□□ -0.24
USP3-205ENST00000557884 FRMD7Q6ZUT3 714 aa13.56□□□□□ -0.24
USP3-205ENST00000557884 HDXQ7Z353 690 aa13.56□□□□□ -0.24
USP3-205ENST00000557884 UBE3DQ7Z6J8 389 aa13.56□□□□□ -0.24
USP3-205ENST00000557884 LAPTM4BQ86VI4 370 aa13.56□□□□□ -0.24
USP3-205ENST00000557884 ANKRD42Q8N9B4 389 aa13.56□□□□□ -0.24
USP3-205ENST00000557884 SNRNP27Q8WVK2 155 aaKnown RBP13.56□□□□□ -0.24
USP3-205ENST00000557884 KCNA7Q96RP8 456 aa13.56□□□□□ -0.24
USP3-205ENST00000557884 HBEGFQ99075 208 aa13.56□□□□□ -0.24
USP3-205ENST00000557884 COPS7BQ9H9Q2 264 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms