RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 MYLK4Q86YV6 388 aaPredicted RBP11.8□□□□□ -0.52
SLIRP-209ENST00000557342 TMEM151BQ8IW70 566 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 LAS2Q8IYD9 372 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 GALNT16Q8N428 558 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 RIBC1Q8N443 379 aaPredicted RBP11.8□□□□□ -0.52
SLIRP-209ENST00000557342 FDCSPQ8NFU4 85 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 OR2L5Q8NG80 312 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 OR11G2Q8NGC1 345 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 AENQ8WTP8 325 aaKnown RBP11.8□□□□□ -0.52
SLIRP-209ENST00000557342 CAVIN3Q969G5 261 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 ATP6V1E2Q96A05 226 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 TBC1D20Q96BZ9 403 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 MS4A6EQ96DS6 147 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 PEX11GQ96HA9 241 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 NPLQ9BXD5 320 aaPredicted RBP11.8□□□□□ -0.52
SLIRP-209ENST00000557342 REXO4Q9GZR2 422 aaKnown RBP11.8□□□□□ -0.52
SLIRP-209ENST00000557342 IPPKQ9H8X2 491 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 ZNF71Q9NQZ8 489 aaPredicted RBP11.8□□□□□ -0.52
SLIRP-209ENST00000557342 GPR83Q9NYM4 423 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 TMEM216Q9P0N5 145 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 C19orf25Q9UFG5 118 aaPredicted RBP11.8□□□□□ -0.52
SLIRP-209ENST00000557342 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.8□□□□□ -0.52
SLIRP-209ENST00000557342 TP53TG5Q9Y2B4 290 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 TSC22D4Q9Y3Q8 395 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 ZNF451Q9Y4E5 1061 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 PCDHGA11Q9Y5H2 935 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 HEMK1Q9Y5R4 338 aaPredicted RBP11.8□□□□□ -0.52
SLIRP-209ENST00000557342 V9GYY5 206 aaPredicted RBP11.8□□□□□ -0.52
SLIRP-209ENST00000557342 LOC102723996A0A087X1L8 192 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 A0A1W2PQ72 361 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 ZNF860A6NHJ4 632 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 LRRC14BA6NHZ5 514 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 A6NL46 340 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 SMIM23A6NLE4 172 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 GOLGA8RI6L899 631 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 PSMD12O00232 456 aaPredicted RBP11.79□□□□□ -0.52
SLIRP-209ENST00000557342 ERI3O43414 337 aaKnown RBP11.79□□□□□ -0.52
SLIRP-209ENST00000557342 CHST10O43529 356 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 GLRA3O75311 464 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 CLDN9O95484 217 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 ALPPP05187 535 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 FHP07954 510 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 NUDT17P0C025 328 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 C8orf89P0DMQ9 161 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 RNH1P13489 461 aaKnown RBP11.79□□□□□ -0.52
SLIRP-209ENST00000557342 HNRNPH1P31943 449 aaKnown RBP11.79□□□□□ -0.52
SLIRP-209ENST00000557342 ARL1P40616 181 aaPredicted RBP11.79□□□□□ -0.52
SLIRP-209ENST00000557342 PIK3CBP42338 1070 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 CCNG1P51959 295 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 AP2B1P63010 937 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 BTN3A2P78410 334 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 IFFO1Q0D2I5 559 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 MYBPC3Q14896 1274 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 TMEM35AQ53FP2 167 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 TMEM205Q6UW68 189 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 ASB18Q6ZVZ8 466 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 CHSY3Q70JA7 882 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 VN1R5Q7Z5H4 357 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 SLC22A9Q8IVM8 553 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 TMEM151AQ8N4L1 468 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 L3MBTL4Q8NA19 623 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 PLPP5Q8NEB5 264 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 MYRIPQ8NFW9 859 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 OR7G3Q8NG95 312 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 OR5T3Q8NGG3 340 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 EPS8L3Q8TE67 593 aaKnown RBP11.79□□□□□ -0.52
SLIRP-209ENST00000557342 ZNF473Q8WTR7 871 aaKnown RBP11.79□□□□□ -0.52
SLIRP-209ENST00000557342 CMTM7Q96FZ5 175 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 MAGEB10Q96LZ2 347 aaPredicted RBP11.79□□□□□ -0.52
SLIRP-209ENST00000557342 CENPKQ9BS16 269 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 NTMT1Q9BV86 223 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 C1QTNF3Q9BXJ4 246 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 MS4A8Q9BY19 250 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 PARD6BQ9BYG5 372 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 ROGDIQ9GZN7 287 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 VN1R1Q9GZP7 353 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 NOL11Q9H8H0 719 aaKnown RBP11.79□□□□□ -0.52
SLIRP-209ENST00000557342 COPS7BQ9H9Q2 264 aaPredicted RBP11.79□□□□□ -0.52
SLIRP-209ENST00000557342 MLXIPLQ9NP71 852 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 RIC8BQ9NVN3 520 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 C5AR2Q9P296 337 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 PCTPQ9UKL6 214 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 ZFYVE26Q68DK2 2539 aa11.79□□□□□ -0.52
SLIRP-209ENST00000557342 ATMQ13315 3056 aa11.78□□□□□ -0.52
SLIRP-209ENST00000557342 NSG1A0A0A6YYJ2 146 aa11.78□□□□□ -0.52
SLIRP-209ENST00000557342 A0A1W2PPM1 405 aa11.78□□□□□ -0.52
SLIRP-209ENST00000557342 A8MT66 165 aa11.78□□□□□ -0.52
SLIRP-209ENST00000557342 H0YIV9 168 aa11.78□□□□□ -0.52
SLIRP-209ENST00000557342 B3GALT2O43825 422 aa11.78□□□□□ -0.52
SLIRP-209ENST00000557342 JRKO75564 520 aa11.78□□□□□ -0.52
SLIRP-209ENST00000557342 B3GALT4O96024 378 aa11.78□□□□□ -0.52
SLIRP-209ENST00000557342 RPS17P08708 135 aaKnown RBP11.78□□□□□ -0.52
SLIRP-209ENST00000557342 SBK3P0C264 359 aa11.78□□□□□ -0.52
SLIRP-209ENST00000557342 COX6A1P12074 109 aa11.78□□□□□ -0.52
SLIRP-209ENST00000557342 ICAM2P13598 275 aa11.78□□□□□ -0.52
SLIRP-209ENST00000557342 ITGA3P26006 1051 aa11.78□□□□□ -0.52
SLIRP-209ENST00000557342 CCT5P48643 541 aa11.78□□□□□ -0.52
SLIRP-209ENST00000557342 MTTPP55157 894 aa11.78□□□□□ -0.52
SLIRP-209ENST00000557342 OLR1P78380 273 aa11.78□□□□□ -0.52
SLIRP-209ENST00000557342 KLRB1Q12918 225 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms