RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 ELP5Q8TE02 316 aa13.3□□□□□ -0.28
SNX6-210ENST00000557341 ANKRD49Q8WVL7 239 aa13.3□□□□□ -0.28
SNX6-210ENST00000557341 ANP32BQ92688 251 aaKnown RBP13.3□□□□□ -0.28
SNX6-210ENST00000557341 SCMH1Q96GD3 660 aa13.3□□□□□ -0.28
SNX6-210ENST00000557341 PTCHD1Q96NR3 888 aa13.3□□□□□ -0.28
SNX6-210ENST00000557341 KRT12Q99456 494 aa13.3□□□□□ -0.28
SNX6-210ENST00000557341 KLHL1Q9NR64 748 aa13.3□□□□□ -0.28
SNX6-210ENST00000557341 EML6Q6ZMW3 1958 aa13.3□□□□□ -0.28
SNX6-210ENST00000557341 TRGV8A0A0C4DH27 118 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 CTAGE15A4D2H0 777 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 SAGE2PA6NJ88 616 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 CDK2AP1O14519 115 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 MAN1A2O60476 641 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 DNAJB6O75190 326 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 SERPINA6P08185 405 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 GSTM2P28161 218 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 CD96P40200 585 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 SLC6A12P48065 614 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 POU4F1Q01851 419 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 CALCOCO2Q13137 446 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 CBLBQ13191 982 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 MTFR2Q6P444 385 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 CTAGE6Q86UF2 777 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.29□□□□□ -0.281e-6■□□□□ 9.2
SNX6-210ENST00000557341 KLHDC8AQ8IYD2 350 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 CYP4X1Q8N118 509 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 TCAIMQ8N3R3 496 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 ARMC2Q8NEN0 867 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 TTLQ8NG68 377 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 CREB3L4Q8TEY5 395 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 PYROXD1Q8WU10 500 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 CDKL2Q92772 493 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 GAL3ST3Q96A11 431 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 RHBDF1Q96CC6 855 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 MCMBPQ9BTE3 642 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 HES7Q9BYE0 225 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 DERL2Q9GZP9 239 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 PRDM9Q9NQV7 894 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 TXNDC16Q9P2K2 825 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 COPG2Q9UBF2 871 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 SNX24Q9Y343 169 aa13.29□□□□□ -0.28
SNX6-210ENST00000557341 CREBBPQ92793 2442 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 IGKV3D-11A0A0A0MRZ8 115 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 TCRBV16S1A1N1A0A5B0 115 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 ASPDHA6ND91 283 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 NCF1BA6NI72 391 aaPredicted RBP13.28□□□□□ -0.28
SNX6-210ENST00000557341 NCF1CA8MVU1 366 aaPredicted RBP13.28□□□□□ -0.28
SNX6-210ENST00000557341 C4orf51C9J302 202 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 PRSS44E7EML9 344 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 CCL21O00585 134 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 SMIM10L1P0DMW3 83 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 C1GALT1C1LP0DN25 315 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 NCF1P14598 390 aaPredicted RBP13.28□□□□□ -0.28
SNX6-210ENST00000557341 MAOAP21397 527 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 CA7P43166 264 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 ST13P50502 369 aaKnown RBP13.28□□□□□ -0.28
SNX6-210ENST00000557341 CASP6P55212 293 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 BTG2P78543 158 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 SRSF11Q05519 484 aaKnown RBP13.28□□□□□ -0.28
SNX6-210ENST00000557341 SLBPQ14493 270 aaKnown RBP eCLIP13.28□□□□□ -0.28
SNX6-210ENST00000557341 TGFBIQ15582 683 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 SPINK14Q6IE38 97 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 TMIGD1Q6UXZ0 262 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 RPS19BP1Q86WX3 136 aaKnown RBP13.28□□□□□ -0.28
SNX6-210ENST00000557341 CA13Q8N1Q1 262 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 KIF2BQ8N4N8 673 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 TSPAN17Q96FV3 270 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 CCDC120Q96HB5 630 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 SMIM10Q96HG1 83 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 SEC16BQ96JE7 1060 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 MAGED4Q96JG8 741 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 FAR2Q96K12 515 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 FRMD6Q96NE9 622 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 RHBGQ9H310 441 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 KLHL31Q9H511 634 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 CDCP1Q9H5V8 836 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 CNOT10Q9H9A5 744 aaKnown RBP13.28□□□□□ -0.28
SNX6-210ENST00000557341 SMYD2Q9NRG4 433 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 WWOXQ9NZC7 414 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 LRFN1Q9P244 771 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 SH3BGRL2Q9UJC5 107 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 ENTPD4Q9Y227 616 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 MMACHCQ9Y4U1 282 aa13.28□□□□□ -0.28
SNX6-210ENST00000557341 DCHS2Q6V1P9 2916 aa13.27□□□□□ -0.28
SNX6-210ENST00000557341 A0A088AWK7 358 aa13.27□□□□□ -0.29
SNX6-210ENST00000557341 FAM187AA6NFU0 413 aa13.27□□□□□ -0.29
SNX6-210ENST00000557341 FAM227AF5H4B4 570 aa13.27□□□□□ -0.29
SNX6-210ENST00000557341 EIF3HO15372 352 aaKnown RBP eCLIP13.27□□□□□ -0.29
SNX6-210ENST00000557341 HNRNPRO43390 633 aaKnown RBP13.27□□□□□ -0.29
SNX6-210ENST00000557341 SLC19A2O60779 497 aa13.27□□□□□ -0.29
SNX6-210ENST00000557341 H2AFYO75367 372 aaKnown RBP13.27□□□□□ -0.29
SNX6-210ENST00000557341 PIAS1O75925 651 aa13.27□□□□□ -0.29
SNX6-210ENST00000557341 NEURL1O76050 574 aa13.27□□□□□ -0.29
SNX6-210ENST00000557341 ZNF10P21506 573 aaPredicted RBP13.27□□□□□ -0.29
SNX6-210ENST00000557341 TPP2P29144 1249 aaPredicted RBP13.27□□□□□ -0.29
SNX6-210ENST00000557341 SSTR1P30872 391 aa13.27□□□□□ -0.29
SNX6-210ENST00000557341 HPDP32754 393 aaPredicted RBP13.27□□□□□ -0.29
SNX6-210ENST00000557341 GDF5P43026 501 aa13.27□□□□□ -0.29
SNX6-210ENST00000557341 ALDH6A1Q02252 535 aaKnown RBP13.27□□□□□ -0.29
SNX6-210ENST00000557341 C18orf21Q32NC0 220 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms