RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 TMEM205Q6UW68 189 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 CHSY3Q70JA7 882 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 VN1R5Q7Z5H4 357 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 ZC3H7AQ8IWR0 971 aaKnown RBP10.1□□□□□ -0.79
LINC00239-201ENST00000556973 ZNF843Q8N446 348 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 MREGQ8N565 214 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 L3MBTL4Q8NA19 623 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 OR2L5Q8NG80 312 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 OR7G3Q8NG95 312 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 OR11G2Q8NGC1 345 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 ZNF473Q8WTR7 871 aaKnown RBP10.1□□□□□ -0.79
LINC00239-201ENST00000556973 REPS1Q96D71 796 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 CMTM7Q96FZ5 175 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 PEX11GQ96HA9 241 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 C1QTNF3Q9BXJ4 246 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 REXO4Q9GZR2 422 aaKnown RBP10.1□□□□□ -0.79
LINC00239-201ENST00000556973 NOL11Q9H8H0 719 aaKnown RBP10.1□□□□□ -0.79
LINC00239-201ENST00000556973 MLXIPLQ9NP71 852 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 PSD3Q9NYI0 1048 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 PCTPQ9UKL6 214 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 GRID1Q9ULK0 1009 aa10.1□□□□□ -0.79
LINC00239-201ENST00000556973 G3BP2Q9UN86 482 aaKnown RBP10.1□□□□□ -0.79
LINC00239-201ENST00000556973 PCDHGA9Q9Y5G4 932 aaKnown RBP10.1□□□□□ -0.79
LINC00239-201ENST00000556973 LOC102723996A0A087X1L8 192 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 A8MT66 165 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 ERI3O43414 337 aaKnown RBP10.09□□□□□ -0.79
LINC00239-201ENST00000556973 ALOX12BO75342 701 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 JRKO75564 520 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 DNAJB5O75953 348 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 B3GALT4O96024 378 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 HPP00738 406 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 TGFB1P01137 390 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 PRB1P04280 392 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 PCNAP12004 261 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 ACPPP15309 386 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 IMPDH1P20839 514 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 JAK1P23458 1154 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 ATP5F1P24539 256 aaPredicted RBP10.09□□□□□ -0.79
LINC00239-201ENST00000556973 PTX3P26022 381 aaPredicted RBP10.09□□□□□ -0.79
LINC00239-201ENST00000556973 CRHR1P34998 444 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 PIK3CBP42338 1070 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 CCNG1P51959 295 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 HERVK_113P63132 956 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 PHEXP78562 749 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 CPSF6Q16630 551 aaKnown RBP eCLIP10.09□□□□□ -0.79
LINC00239-201ENST00000556973 CCDC153Q494R4 210 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 TMEM35AQ53FP2 167 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 MFSD4BQ5TF39 518 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 ADNP2Q6IQ32 1131 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 NDUFAF7Q7L592 441 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 MILR1Q7Z6M3 343 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 MYLK4Q86YV6 388 aaPredicted RBP10.09□□□□□ -0.79
LINC00239-201ENST00000556973 SLC22A9Q8IVM8 553 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 PLPP5Q8NEB5 264 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 FDCSPQ8NFU4 85 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 OR5T3Q8NGG3 340 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 OR2W6PQ8NHA6 318 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 C9orf43Q8TAL5 461 aaPredicted RBP10.09□□□□□ -0.79
LINC00239-201ENST00000556973 METTL21AQ8WXB1 218 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 TBC1D20Q96BZ9 403 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 CCDC126Q96EE4 140 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 MAGEB10Q96LZ2 347 aaPredicted RBP10.09□□□□□ -0.79
LINC00239-201ENST00000556973 F2RL3Q96RI0 385 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 SERINC2Q96SA4 455 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 SLC25A23Q9BV35 468 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 ERVK-6Q9BXR3 956 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 ROGDIQ9GZN7 287 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 AICDAQ9GZX7 198 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 ZBTB26Q9HCK0 441 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 PRM3Q9NNZ6 103 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 PRDM7Q9NQW5 492 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 FBXL4Q9UKA2 621 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 RNF11Q9Y3C5 154 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 PCDHGB7Q9Y5F8 929 aa10.09□□□□□ -0.79
LINC00239-201ENST00000556973 IGHV1-45A0A0A0MS14 117 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 NSG1A0A0A6YYJ2 146 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 A0A1W2PQ72 361 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 ZNF860A6NHJ4 632 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 A6NL46 340 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 FOXO6A8MYZ6 492 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 B8ZZF3 427 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 C4orf51C9J302 202 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 FOXE1O00358 373 aaPredicted RBP10.08□□□□□ -0.8
LINC00239-201ENST00000556973 B3GALT2O43825 422 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 DLX3O60479 287 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 DNAJB6O75190 326 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 C1QL1O75973 258 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 SUPT7LO94864 414 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 OTCP00480 354 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 FHP07954 510 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 RPS17P08708 135 aaKnown RBP10.08□□□□□ -0.8
LINC00239-201ENST00000556973 C8orf89P0DMQ9 161 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 ICAM2P13598 275 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 KRT4P19013 534 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 ARL1P40616 181 aaPredicted RBP10.08□□□□□ -0.8
LINC00239-201ENST00000556973 TSFMP43897 325 aaKnown RBP10.08□□□□□ -0.8
LINC00239-201ENST00000556973 PGDP52209 483 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 ARFIP1P53367 373 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 PLA2G16P53816 162 aa10.08□□□□□ -0.8
LINC00239-201ENST00000556973 PRKAA2P54646 552 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms