RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 NFAM1Q8NET5 270 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-221ENST00000556571 MYRIPQ8NFW9 859 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 OR52N2Q8NGI0 321 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 CD200R1Q8TD46 325 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 NRGNQ92686 78 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 GPR21Q99679 349 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 HAUS8Q9BT25 410 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 SARGQ9BW04 601 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 ATG10Q9H0Y0 220 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 CCM2LQ9NUG4 571 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-221ENST00000556571 SH2B3Q9UQQ2 575 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 COMMD10Q9Y6G5 202 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 ZNF469Q96JG9 3925 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-221ENST00000556571 ZNF407Q9C0G0 2248 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 TCRBV16S1A1N1A0A5B0 115 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 MAGEB16A2A368 324 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 OR1F1O43749 312 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 CEP104O60308 925 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 DNAJB6O75190 326 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 CDH1P12830 882 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 NPPBP16860 134 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 CCR8P51685 355 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 CLCN2P51788 898 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 OLR1P78380 273 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 BTG2P78543 158 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 CTBP1Q13363 440 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 DHX34Q14147 1143 aaKnown RBP11.09□□□□□ -0.63
ACTN1-221ENST00000556571 GXYLT1Q4G148 440 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 LRRC8EQ6NSJ5 796 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 CASC4Q6P4E1 433 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 ZNF549Q6P9A3 640 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 ABHD13Q7L211 337 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 MDGA2Q7Z553 956 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 STRA8Q7Z7C7 330 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 PALM2Q8IXS6 379 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 CPNE9Q8IYJ1 553 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 MMP21Q8N119 569 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 TBC1D19Q8N5T2 526 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 ABHD11Q8NFV4 315 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 OR5M3Q8NGP4 307 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 ALKBH8Q96BT7 664 aaKnown RBP11.09□□□□□ -0.63
ACTN1-221ENST00000556571 SGPP1Q9BX95 441 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 SLC6A16Q9GZN6 736 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 DEFB127Q9H1M4 99 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 PARVBQ9HBI1 364 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 TIMMDC1Q9NPL8 285 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 PRDM9Q9NQV7 894 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 FBXO6Q9NRD1 293 aaPredicted RBP11.09□□□□□ -0.63
ACTN1-221ENST00000556571 DNAJB12Q9NXW2 375 aaKnown RBP11.09□□□□□ -0.63
ACTN1-221ENST00000556571 EDARQ9UNE0 448 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 PDE10AQ9Y233 779 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 HCFC1P51610 2035 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 DNHD1Q96M86 4753 aa11.09□□□□□ -0.63
ACTN1-221ENST00000556571 IGKV3D-11A0A0A0MRZ8 115 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 TRBV11-1A0A0K0K1C0 115 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 FAM237BA0A1B0GVD1 139 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 TCRBV7S3A2A0A539 114 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 A8MUA0 341 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 NPIPA2E9PIF3 369 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 NPIPA3F8WFD2 350 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 PSMD12O00232 456 aaPredicted RBP11.08□□□□□ -0.64
ACTN1-221ENST00000556571 AVILO75366 819 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 ITGA10O75578 1167 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 CTAG2O75638 210 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 TUBB4AP04350 444 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 SERPIND1P05546 499 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 C8GP07360 202 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 ZNF888P0CJ79 500 aaPredicted RBP11.08□□□□□ -0.64
ACTN1-221ENST00000556571 FOSL1P15407 271 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 MAOAP21397 527 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 GPR85P60893 370 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 RGS1Q08116 209 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 SP140Q13342 867 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 SIX1Q15475 284 aaPredicted RBP11.08□□□□□ -0.64
ACTN1-221ENST00000556571 TERF2Q15554 542 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 RGS9BPQ6ZS82 235 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 SPNS2Q8IVW8 549 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 DENND6AQ8IWF6 608 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 LMNTD2Q8IXW0 634 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.08□□□□□ -0.64
ACTN1-221ENST00000556571 APCDD1LQ8NCL9 501 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 B3GNT7Q8NFL0 401 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 OR4K1Q8NGD4 311 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 OR10Q1Q8NGQ4 319 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 CREB3L4Q8TEY5 395 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 MAIP1Q8WWC4 291 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 SAMD15Q9P1V8 674 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 ZFP69BQ9UJL9 534 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 ADAMTS6Q9UKP5 1117 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 FBXW2Q9UKT8 454 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 ERVK-11Q9UQG0 969 aa11.08□□□□□ -0.64
ACTN1-221ENST00000556571 YARS2Q9Y2Z4 477 aaKnown RBP11.08□□□□□ -0.64
ACTN1-221ENST00000556571 FLNAP21333 2647 aaKnown RBP11.08□□□□□ -0.64
ACTN1-221ENST00000556571 TRBC2A0A5B9 178 aa11.07□□□□□ -0.64
ACTN1-221ENST00000556571 OR14I1A6ND48 311 aa11.07□□□□□ -0.64
ACTN1-221ENST00000556571 URADA6NGE7 173 aa11.07□□□□□ -0.64
ACTN1-221ENST00000556571 FIGNL2A6NMB9 653 aa11.07□□□□□ -0.64
ACTN1-221ENST00000556571 ACOT7O00154 380 aa11.07□□□□□ -0.64
ACTN1-221ENST00000556571 BCKDKO14874 412 aa11.07□□□□□ -0.64
ACTN1-221ENST00000556571 SLC16A5O15375 505 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms