RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 UBDO15205 165 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 HSPA12AO43301 675 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 CYTIPO60759 359 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 FMO6PO60774 539 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 NDUFS3O75489 264 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 TRBC1P01850 177 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 CKMP06732 381 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 CTSOP43234 321 aaPredicted RBP4.91□□□□□ -1.62
TMEM260-210ENST00000556422 OMPP47874 163 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 PSMD8P48556 350 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 AP2S1P53680 142 aaPredicted RBP4.91□□□□□ -1.62
TMEM260-210ENST00000556422 CBX2Q14781 532 aaPredicted RBP4.91□□□□□ -1.62
TMEM260-210ENST00000556422 IL27RAQ6UWB1 636 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 NXPE4Q6UWF7 544 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 OTOP2Q7RTS6 562 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 PIWIL3Q7Z3Z3 882 aaKnown RBP4.91□□□□□ -1.62
TMEM260-210ENST00000556422 SNX20Q7Z614 316 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 CPNE9Q8IYJ1 553 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 CLYBLQ8N0X4 340 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 FAM156AQ8NDB6 213 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 HIPK4Q8NE63 616 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 TTC16Q8NEE8 873 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 STAG3L4Q8TBR4 150 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 ZNF596Q8TC21 504 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 LKAAEAR1Q8TD35 194 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 TWIST2Q8WVJ9 160 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 JADE3Q92613 823 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 ESAMQ96AP7 390 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 TESCQ96BS2 214 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 MYO19Q96H55 970 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 QRFPRQ96P65 431 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 BOCQ9BWV1 1114 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 SLC46A2Q9BY10 475 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 AKTIPQ9H8T0 292 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 MID1IP1Q9NPA3 183 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 SLC52A3Q9NQ40 469 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 PCTPQ9UKL6 214 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 DMRT1Q9Y5R6 373 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 PMF1-BGLAPU3KQ54 211 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 C2orf16Q68DN1 1984 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 TCF20Q9UGU0 1960 aaKnown RBP4.91□□□□□ -1.62
TMEM260-210ENST00000556422 PRUNE2Q8WUY3 3088 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 A8MUA0 341 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 STX7O15400 261 aaKnown RBP4.91□□□□□ -1.62
TMEM260-210ENST00000556422 RGS5O15539 181 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 SCO1O75880 301 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 COX5BP10606 129 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 ENO3P13929 434 aaPredicted RBP4.91□□□□□ -1.62
TMEM260-210ENST00000556422 GPX3P22352 226 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 PEX2P28328 305 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 ZFP36L2P47974 494 aaKnown RBP4.91□□□□□ -1.62
TMEM260-210ENST00000556422 STK19P49842 368 aaPredicted RBP4.91□□□□□ -1.62
TMEM260-210ENST00000556422 ATP6V0D1P61421 351 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 AP1S1P61966 158 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 CLCQ05315 142 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 LCP2Q13094 533 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 ITGADQ13349 1161 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 FASTKQ14296 549 aaKnown RBP4.91□□□□□ -1.62
TMEM260-210ENST00000556422 GRB7Q14451 532 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 ZRANB3Q5FWF4 1079 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 FAM69AQ5T7M9 428 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 SBSNQ6UWP8 590 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 C16orf89Q6UX73 402 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 TPGS1Q6ZTW0 290 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 ZNF765Q7L2R6 523 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 TRMT11Q7Z4G4 463 aaKnown RBP4.91□□□□□ -1.62
TMEM260-210ENST00000556422 RETREG3Q86VR2 466 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 THNSL2Q86YJ6 484 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 BBS1Q8NFJ9 593 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 FBXW5Q969U6 566 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 ACDQ96AP0 544 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 ZNF597Q96LX8 424 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 ZNF578Q96N58 590 aaPredicted RBP4.91□□□□□ -1.62
TMEM260-210ENST00000556422 KLHL32Q96NJ5 620 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 TRNT1Q96Q11 434 aaKnown RBP4.91□□□□□ -1.62
TMEM260-210ENST00000556422 PARD6GQ9BYG4 376 aaPredicted RBP4.91□□□□□ -1.62
TMEM260-210ENST00000556422 SEMA4CQ9C0C4 833 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 MFFQ9GZY8 342 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 SEMA4BQ9NPR2 832 aaPredicted RBP4.91□□□□□ -1.62
TMEM260-210ENST00000556422 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.91□□□□□ -1.62
TMEM260-210ENST00000556422 HCFC1R1Q9NWW0 138 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 IMPAD1Q9NX62 359 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 KCND3Q9UK17 655 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 SLC6A14Q9UN76 642 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 GMPPBQ9Y5P6 360 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 PRSS21Q9Y6M0 314 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 NUP210Q8TEM1 1887 aaPredicted RBP4.91□□□□□ -1.62
TMEM260-210ENST00000556422 TRBV5-4A0A0C4DH59 114 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 hCG_1809904A0A1W2PP81 198 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 A0A1W2PPE2 198 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 A0A1W2PR64 198 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 B4E171 279 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 SUPT3HB4E1H0 165 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 E7ENX8 843 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 PSMD12O00232 456 aaPredicted RBP4.91□□□□□ -1.62
TMEM260-210ENST00000556422 AZIN1O14977 448 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 TRIM24O15164 1050 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 MOSPD3O75425 235 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 CLDN7O95471 211 aa4.91□□□□□ -1.62
TMEM260-210ENST00000556422 PRAMEF1O95521 474 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms