RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 TMEM205Q6UW68 189 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 GSPT2Q8IYD1 628 aaKnown RBP10.9□□□□□ -0.66
SLIRP-205ENST00000556310 TEX19Q8NA77 164 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 UTP15Q8TED0 518 aaKnown RBP10.9□□□□□ -0.66
SLIRP-205ENST00000556310 C8orf44Q96CB5 159 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 PTCD3Q96EY7 689 aaKnown RBP10.9□□□□□ -0.66
SLIRP-205ENST00000556310 OR1F2PQ96R84 312 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 MESP1Q9BRJ9 268 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 VN1R1Q9GZP7 353 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 EPN3Q9H201 632 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 CLK4Q9HAZ1 481 aaKnown RBP10.9□□□□□ -0.66
SLIRP-205ENST00000556310 RIC8BQ9NVN3 520 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 C5AR2Q9P296 337 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 OPTCQ9UBM4 332 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 MKL2Q9ULH7 1088 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 NBASA2RRP1 2371 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 CPAMD8Q8IZJ3 1885 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 LOC102723996A0A087X1L8 192 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 NSG1A0A0A6YYJ2 146 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 C4orf51C9J302 202 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 MASP2O00187 686 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 KLK8O60259 260 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 DPM1O60762 260 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 CLEC3AO75596 197 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 SNRPAP09012 282 aaKnown RBP10.89□□□□□ -0.67
SLIRP-205ENST00000556310 C8orf89P0DMQ9 161 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 SMIM10L1P0DMW3 83 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 COL6A2P12110 1019 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 CD22P20273 847 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 ITGA3P26006 1051 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 GCAP28676 217 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 TNFRSF8P28908 595 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 HPDP32754 393 aaPredicted RBP10.89□□□□□ -0.67
SLIRP-205ENST00000556310 CASP2P42575 452 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 EFNA3P52797 238 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 ALDH18A1P54886 795 aaKnown RBP10.89□□□□□ -0.67
SLIRP-205ENST00000556310 IRF8Q02556 426 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 EEF1A2Q05639 463 aaKnown RBP10.89□□□□□ -0.67
SLIRP-205ENST00000556310 PCDH1Q08174 1060 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 CHIT1Q13231 466 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 DOC2AQ14183 400 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 PFKFB4Q16877 469 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 MINDY4Q4G0A6 757 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 C4orf48Q5BLP8 95 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 TOR1AIP1Q5JTV8 583 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 MFSD4BQ5TF39 518 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 IRAK1BP1Q5VVH5 260 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 CNPY4Q8N129 248 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 PLD6Q8N2A8 252 aaKnown RBP10.89□□□□□ -0.67
SLIRP-205ENST00000556310 OR5T3Q8NGG3 340 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 GAL3ST3Q96A11 431 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 MTBPQ96DY7 904 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 SMIM10Q96HG1 83 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 AICDAQ9GZX7 198 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 LHPPQ9H008 270 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 EPB41L4BQ9H329 900 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 ZNF552Q9H707 407 aaPredicted RBP10.89□□□□□ -0.67
SLIRP-205ENST00000556310 ZNF160Q9HCG1 818 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 FETUBQ9UGM5 382 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 SCN2AQ99250 2005 aa10.89□□□□□ -0.67
SLIRP-205ENST00000556310 IGHV1-45A0A0A0MS14 117 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 ANKDD1BA6NHY2 528 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 WFS1O76024 890 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 B3GALT4O96024 378 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 FHP07954 510 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 RBP1P09455 135 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 MYBL2P10244 700 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 EPB42P16452 691 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 JAK1P23458 1154 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 SOX11P35716 441 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 HNF4AP41235 474 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 RAB8AP61006 207 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 TLE1Q04724 770 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 PCOLCEQ15113 449 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 PCBP2Q15366 365 aaKnown RBP eCLIP10.88□□□□□ -0.67
SLIRP-205ENST00000556310 ADPRMQ3LIE5 342 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 LGSNQ5TDP6 509 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 FAAH2Q6GMR7 532 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 METTL2BQ6P1Q9 378 aaKnown RBP10.88□□□□□ -0.67
SLIRP-205ENST00000556310 NDUFAF7Q7L592 441 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 VN1R5Q7Z5H4 357 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 CNTRLQ7Z7A1 2325 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 SHISA5Q8N114 240 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 METTL21AQ8WXB1 218 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.88□□□□□ -0.67
SLIRP-205ENST00000556310 CCT6BQ92526 530 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 TM9SF4Q92544 642 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 UBE2E3Q969T4 207 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 TBC1D20Q96BZ9 403 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 PEX11GQ96HA9 241 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 RBCK1Q9BYM8 510 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 ZNF700Q9H0M5 742 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 RHBGQ9H310 441 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 KLHL31Q9H511 634 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 LANCL2Q9NS86 450 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 ZNF358Q9NW07 568 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 CPSF2Q9P2I0 782 aaKnown RBP10.88□□□□□ -0.67
SLIRP-205ENST00000556310 PSMC3IPQ9P2W1 217 aaPredicted RBP10.88□□□□□ -0.67
SLIRP-205ENST00000556310 XPR1Q9UBH6 696 aa10.88□□□□□ -0.67
SLIRP-205ENST00000556310 C19orf25Q9UFG5 118 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms