RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 NECTIN3Q9NQS3 549 aa12.45□□□□□ -0.42
TGFB3-204ENST00000556285 LRFN1Q9P244 771 aa12.45□□□□□ -0.42
TGFB3-204ENST00000556285 ZFP69BQ9UJL9 534 aa12.45□□□□□ -0.42
TGFB3-204ENST00000556285 SLC22A14Q9Y267 594 aa12.45□□□□□ -0.42
TGFB3-204ENST00000556285 POLQO75417 2590 aa12.45□□□□□ -0.42
TGFB3-204ENST00000556285 HIVEP1P15822 2718 aa12.44□□□□□ -0.42
TGFB3-204ENST00000556285 IGKV3D-11A0A0A0MRZ8 115 aa12.44□□□□□ -0.42
TGFB3-204ENST00000556285 A0A0G2JN53 185 aa12.44□□□□□ -0.42
TGFB3-204ENST00000556285 GOLGA6L10A0A0M3HER8 536 aa12.44□□□□□ -0.42
TGFB3-204ENST00000556285 PRMT3O60678 531 aa12.44□□□□□ -0.42
TGFB3-204ENST00000556285 SMIM10L1P0DMW3 83 aa12.44□□□□□ -0.42
TGFB3-204ENST00000556285 SAT1P21673 171 aa12.44□□□□□ -0.42
TGFB3-204ENST00000556285 RGS1Q08116 209 aa12.44□□□□□ -0.42
TGFB3-204ENST00000556285 NAA30Q147X3 362 aaPredicted RBP12.44□□□□□ -0.42
TGFB3-204ENST00000556285 MAPKAPK3Q16644 382 aa12.44□□□□□ -0.42
TGFB3-204ENST00000556285 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.44□□□□□ -0.42
TGFB3-204ENST00000556285 TOR1AIP1Q5JTV8 583 aa12.44□□□□□ -0.42
TGFB3-204ENST00000556285 STEAP4Q687X5 459 aa12.44□□□□□ -0.42
TGFB3-204ENST00000556285 SLC25A25Q6KCM7 469 aa12.44□□□□□ -0.42
TGFB3-204ENST00000556285 FAM45BPQ6NSW5 357 aa12.44□□□□□ -0.42
TGFB3-204ENST00000556285 NXPE4Q6UWF7 544 aa12.44□□□□□ -0.42
TGFB3-204ENST00000556285 C3P1Q6ZMU1 363 aa12.44□□□□□ -0.42
TGFB3-204ENST00000556285 Q6ZPB1 254 aaPredicted RBP12.44□□□□□ -0.42
TGFB3-204ENST00000556285 FGD2Q7Z6J4 655 aa12.44□□□□□ -0.42
TGFB3-204ENST00000556285 STRA8Q7Z7C7 330 aa12.44□□□□□ -0.42
TGFB3-204ENST00000556285 SPPL2CQ8IUH8 684 aa12.44□□□□□ -0.42
TGFB3-204ENST00000556285 ANKMY2Q8IV38 441 aa12.44□□□□□ -0.42
TGFB3-204ENST00000556285 CPSF7Q8N684 471 aaKnown RBP12.44□□□□□ -0.42
TGFB3-204ENST00000556285 FAM45AQ8TCE6 357 aa12.44□□□□□ -0.42
TGFB3-204ENST00000556285 THAP3Q8WTV1 239 aaPredicted RBP12.44□□□□□ -0.42
TGFB3-204ENST00000556285 SLCO2A1Q92959 643 aa12.44□□□□□ -0.42
TGFB3-204ENST00000556285 SMIM10Q96HG1 83 aa12.44□□□□□ -0.42
TGFB3-204ENST00000556285 MAGED4Q96JG8 741 aa12.44□□□□□ -0.42
TGFB3-204ENST00000556285 LURAP1Q96LR2 239 aa12.44□□□□□ -0.42
TGFB3-204ENST00000556285 TRIM51Q9BSJ1 452 aa12.44□□□□□ -0.42
TGFB3-204ENST00000556285 NAT9Q9BTE0 207 aa12.44□□□□□ -0.42
TGFB3-204ENST00000556285 TRIM54Q9BYV2 358 aa12.44□□□□□ -0.42
TGFB3-204ENST00000556285 TRMT1Q9NXH9 659 aaKnown RBP12.44□□□□□ -0.42
TGFB3-204ENST00000556285 TEX264Q9Y6I9 313 aa12.44□□□□□ -0.42
TGFB3-204ENST00000556285 TCRBV16S1A1N1A0A5B0 115 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 SAGE2PA6NJ88 616 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 TP73O15350 636 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 ASNA1O43681 348 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 SLC25A12O75746 678 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 PIAS1O75925 651 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 ESRRAP11474 423 aaPredicted RBP12.43□□□□□ -0.42
TGFB3-204ENST00000556285 ZNF37AP17032 561 aaPredicted RBP12.43□□□□□ -0.42
TGFB3-204ENST00000556285 JAK1P23458 1154 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 AHRP35869 848 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 GDF5P43026 501 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 KIR3DL1P43629 444 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 MLF1P58340 268 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 TAS2R50P59544 299 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 RUNX2Q13950 521 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 FASTKD3Q14CZ7 662 aaKnown RBP12.43□□□□□ -0.42
TGFB3-204ENST00000556285 RBBP5Q15291 538 aaKnown RBP12.43□□□□□ -0.42
TGFB3-204ENST00000556285 KRTCAP3Q53RY4 240 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 MTFR2Q6P444 385 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 RPTNQ6XPR3 784 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 QSOX2Q6ZRP7 698 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 ABHD13Q7L211 337 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 TMPRSS11BQ86T26 416 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 KLHL7Q8IXQ5 586 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 LGI4Q8N135 537 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 CA13Q8N1Q1 262 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 TMEM178AQ8NBL3 297 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 GABPB2Q8TAK5 448 aaPredicted RBP12.43□□□□□ -0.42
TGFB3-204ENST00000556285 CREB3L4Q8TEY5 395 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 ANKRD49Q8WVL7 239 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 ATL1Q8WXF7 558 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 PDLIM5Q96HC4 596 aaKnown RBP12.43□□□□□ -0.42
TGFB3-204ENST00000556285 PELI2Q9HAT8 420 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 ZFATQ9P243 1243 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 MEMO1Q9Y316 297 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 DYRK1BQ9Y463 629 aa12.43□□□□□ -0.42
TGFB3-204ENST00000556285 PABPN1LA6NDY0 278 aaKnown RBP12.42□□□□□ -0.42
TGFB3-204ENST00000556285 TGFBR3LH3BV60 316 aa12.42□□□□□ -0.42
TGFB3-204ENST00000556285 CES2O00748 559 aa12.42□□□□□ -0.42
TGFB3-204ENST00000556285 NME2P1O60361 137 aa12.42□□□□□ -0.42
TGFB3-204ENST00000556285 ENO2P09104 434 aaPredicted RBP12.42□□□□□ -0.42
TGFB3-204ENST00000556285 COX6B1P14854 86 aa12.42□□□□□ -0.42
TGFB3-204ENST00000556285 NME2P22392 152 aa12.42□□□□□ -0.42
TGFB3-204ENST00000556285 PPP2R1BP30154 601 aa12.42□□□□□ -0.42
TGFB3-204ENST00000556285 PTGER1P34995 402 aa12.42□□□□□ -0.42
TGFB3-204ENST00000556285 RFC3P40938 356 aa12.42□□□□□ -0.42
TGFB3-204ENST00000556285 NR0B1P51843 470 aaKnown RBP12.42□□□□□ -0.42
TGFB3-204ENST00000556285 HNRNPFP52597 415 aaKnown RBP12.42□□□□□ -0.42
TGFB3-204ENST00000556285 ITGA8P53708 1063 aa12.42□□□□□ -0.42
TGFB3-204ENST00000556285 CASP6P55212 293 aa12.42□□□□□ -0.42
TGFB3-204ENST00000556285 TAS2R39P59534 338 aa12.42□□□□□ -0.42
TGFB3-204ENST00000556285 BTN3A2P78410 334 aa12.42□□□□□ -0.42
TGFB3-204ENST00000556285 TSNQ15631 228 aaKnown RBP12.42□□□□□ -0.42
TGFB3-204ENST00000556285 XKRXQ6PP77 449 aa12.42□□□□□ -0.42
TGFB3-204ENST00000556285 ZC3HC1Q86WB0 502 aaKnown RBP12.42□□□□□ -0.42
TGFB3-204ENST00000556285 CEP97Q8IW35 865 aa12.42□□□□□ -0.42
TGFB3-204ENST00000556285 PDIK1LQ8N165 341 aa12.42□□□□□ -0.42
TGFB3-204ENST00000556285 TBC1D19Q8N5T2 526 aa12.42□□□□□ -0.42
TGFB3-204ENST00000556285 TMEM52Q8NDY8 209 aa12.42□□□□□ -0.42
TGFB3-204ENST00000556285 CAPZA3Q96KX2 299 aa12.42□□□□□ -0.42
TGFB3-204ENST00000556285 AIF1LQ9BQI0 150 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms