RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 FHP07954 510 aa19.32■□□□□ 0.68
VTI1B-205ENST00000555543 CYC1P08574 325 aa19.32■□□□□ 0.68
VTI1B-205ENST00000555543 ABHD2P08910 425 aa19.32■□□□□ 0.68
VTI1B-205ENST00000555543 GCAP28676 217 aa19.32■□□□□ 0.68
VTI1B-205ENST00000555543 MSH2P43246 934 aa19.32■□□□□ 0.68
VTI1B-205ENST00000555543 SERPINB9P50453 376 aa19.32■□□□□ 0.68
VTI1B-205ENST00000555543 SKP1P63208 163 aa19.32■□□□□ 0.68
VTI1B-205ENST00000555543 IRF8Q02556 426 aa19.32■□□□□ 0.68
VTI1B-205ENST00000555543 KCNC4Q03721 635 aa19.32■□□□□ 0.68
VTI1B-205ENST00000555543 E2F2Q14209 437 aa19.32■□□□□ 0.68
VTI1B-205ENST00000555543 SETDB1Q15047 1291 aa19.32■□□□□ 0.68
VTI1B-205ENST00000555543 PLEKHN1Q494U1 663 aaPredicted RBP19.32■□□□□ 0.68
VTI1B-205ENST00000555543 TECRLQ5HYJ1 363 aa19.32■□□□□ 0.68
VTI1B-205ENST00000555543 IRAK1BP1Q5VVH5 260 aa19.32■□□□□ 0.68
VTI1B-205ENST00000555543 IGFL2Q6UWQ7 119 aa19.32■□□□□ 0.68
VTI1B-205ENST00000555543 CPEB2Q7Z5Q1 589 aaKnown RBP19.32■□□□□ 0.68
VTI1B-205ENST00000555543 BRIX1Q8TDN6 353 aaKnown RBP19.32■□□□□ 0.68
VTI1B-205ENST00000555543 METTL21AQ8WXB1 218 aa19.32■□□□□ 0.68
VTI1B-205ENST00000555543 GAL3ST3Q96A11 431 aa19.32■□□□□ 0.68
VTI1B-205ENST00000555543 TBC1D20Q96BZ9 403 aa19.32■□□□□ 0.68
VTI1B-205ENST00000555543 MS4A6EQ96DS6 147 aa19.32■□□□□ 0.68
VTI1B-205ENST00000555543 IMMP1LQ96LU5 166 aa19.32■□□□□ 0.68
VTI1B-205ENST00000555543 WDR77Q9BQA1 342 aaPredicted RBP19.32■□□□□ 0.68
VTI1B-205ENST00000555543 EFCAB11Q9BUY7 163 aa19.32■□□□□ 0.68
VTI1B-205ENST00000555543 TXLNGYQ9BZA5 131 aa19.32■□□□□ 0.68
VTI1B-205ENST00000555543 CLMPQ9H6B4 373 aa19.32■□□□□ 0.68
VTI1B-205ENST00000555543 OPTCQ9UBM4 332 aa19.32■□□□□ 0.68
VTI1B-205ENST00000555543 ZNF180Q9UJW8 692 aa19.32■□□□□ 0.68
VTI1B-205ENST00000555543 IKBKGQ9Y6K9 419 aa19.32■□□□□ 0.68
VTI1B-205ENST00000555543 EXOC1LA0A1B0GW35 172 aa19.31■□□□□ 0.68
VTI1B-205ENST00000555543 CCDC189A1A4V9 331 aa19.31■□□□□ 0.68
VTI1B-205ENST00000555543 LRIT2A6NDA9 550 aa19.31■□□□□ 0.68
VTI1B-205ENST00000555543 ESPNB1AK53 854 aa19.31■□□□□ 0.68
VTI1B-205ENST00000555543 TRIM49D1C9J1S8 452 aa19.31■□□□□ 0.68
VTI1B-205ENST00000555543 RIPK2O43353 540 aa19.31■□□□□ 0.68
VTI1B-205ENST00000555543 ERI3O43414 337 aaKnown RBP19.31■□□□□ 0.68
VTI1B-205ENST00000555543 CLEC3AO75596 197 aa19.31■□□□□ 0.68
VTI1B-205ENST00000555543 KRT38O76015 456 aa19.31■□□□□ 0.68
VTI1B-205ENST00000555543 WFS1O76024 890 aa19.31■□□□□ 0.68
VTI1B-205ENST00000555543 SERPINA7P05543 415 aa19.31■□□□□ 0.68
VTI1B-205ENST00000555543 MYBL2P10244 700 aa19.31■□□□□ 0.68
VTI1B-205ENST00000555543 GFAPP14136 432 aa19.31■□□□□ 0.68
VTI1B-205ENST00000555543 IL10P22301 178 aa19.31■□□□□ 0.68
VTI1B-205ENST00000555543 GSTM2P28161 218 aa19.31■□□□□ 0.68
VTI1B-205ENST00000555543 CASP2P42575 452 aa19.31■□□□□ 0.68
VTI1B-205ENST00000555543 STXBP1P61764 594 aaKnown RBP19.31■□□□□ 0.68
VTI1B-205ENST00000555543 ABRAXAS2Q15018 415 aa19.31■□□□□ 0.68
VTI1B-205ENST00000555543 TBCCQ15814 346 aa19.31■□□□□ 0.68
VTI1B-205ENST00000555543 PFKFB4Q16877 469 aa19.31■□□□□ 0.68
VTI1B-205ENST00000555543 ADPRMQ3LIE5 342 aa19.31■□□□□ 0.68
VTI1B-205ENST00000555543 NIPAL1Q6NVV3 410 aa19.31■□□□□ 0.68
VTI1B-205ENST00000555543 KLC3Q6P597 504 aa19.31■□□□□ 0.68
VTI1B-205ENST00000555543 TAOK1Q7L7X3 1001 aa19.31■□□□□ 0.68
VTI1B-205ENST00000555543 ZADH2Q8N4Q0 377 aa19.31■□□□□ 0.68
VTI1B-205ENST00000555543 CPT1CQ8TCG5 803 aa19.31■□□□□ 0.68
VTI1B-205ENST00000555543 TM9SF4Q92544 642 aa19.31■□□□□ 0.68
VTI1B-205ENST00000555543 TUBB6Q9BUF5 446 aa19.31■□□□□ 0.68
VTI1B-205ENST00000555543 EPB41L4BQ9H329 900 aa19.31■□□□□ 0.68
VTI1B-205ENST00000555543 L2HGDHQ9H9P8 463 aa19.31■□□□□ 0.68
VTI1B-205ENST00000555543 B3GNT3Q9Y2A9 372 aa19.31■□□□□ 0.68
VTI1B-205ENST00000555543 ANKDD1BA6NHY2 528 aa19.3■□□□□ 0.68
VTI1B-205ENST00000555543 KLK8O60259 260 aa19.3■□□□□ 0.68
VTI1B-205ENST00000555543 ITGAMP11215 1152 aa19.3■□□□□ 0.68
VTI1B-205ENST00000555543 SOX11P35716 441 aa19.3■□□□□ 0.68
VTI1B-205ENST00000555543 BTN3A2P78410 334 aa19.3■□□□□ 0.68
VTI1B-205ENST00000555543 NAA30Q147X3 362 aaPredicted RBP19.3■□□□□ 0.68
VTI1B-205ENST00000555543 LINC00696Q6ZRV3 163 aa19.3■□□□□ 0.68
VTI1B-205ENST00000555543 Q6ZS92 163 aa19.3■□□□□ 0.68
VTI1B-205ENST00000555543 TRMT10CQ7L0Y3 403 aaKnown RBP19.3■□□□□ 0.68
VTI1B-205ENST00000555543 CA13Q8N1Q1 262 aa19.3■□□□□ 0.68
VTI1B-205ENST00000555543 SIRT6Q8N6T7 355 aa19.3■□□□□ 0.68
VTI1B-205ENST00000555543 TEX9Q8N6V9 391 aa19.3■□□□□ 0.68
VTI1B-205ENST00000555543 PLPP5Q8NEB5 264 aa19.3■□□□□ 0.68
VTI1B-205ENST00000555543 SEC16BQ96JE7 1060 aa19.3■□□□□ 0.68
VTI1B-205ENST00000555543 RHBGQ9H310 441 aa19.3■□□□□ 0.68
VTI1B-205ENST00000555543 SLAMF7Q9NQ25 335 aa19.3■□□□□ 0.68
VTI1B-205ENST00000555543 PTGFRNQ9P2B2 879 aa19.3■□□□□ 0.68
VTI1B-205ENST00000555543 CPSF2Q9P2I0 782 aaKnown RBP19.3■□□□□ 0.68
VTI1B-205ENST00000555543 C19orf25Q9UFG5 118 aaPredicted RBP19.3■□□□□ 0.68
VTI1B-205ENST00000555543 ASH1LQ9NR48 2969 aaKnown RBP19.3■□□□□ 0.68
VTI1B-205ENST00000555543 SCN2AQ99250 2005 aa19.29■□□□□ 0.68
VTI1B-205ENST00000555543 MAGEB17A8MXT2 336 aa19.29■□□□□ 0.68
VTI1B-205ENST00000555543 FAM227AF5H4B4 570 aa19.29■□□□□ 0.68
VTI1B-205ENST00000555543 B4GALT2O60909 372 aa19.29■□□□□ 0.68
VTI1B-205ENST00000555543 CNTFP26441 200 aa19.29■□□□□ 0.68
VTI1B-205ENST00000555543 PLA2G16P53816 162 aa19.29■□□□□ 0.68
VTI1B-205ENST00000555543 ALDH18A1P54886 795 aaKnown RBP19.29■□□□□ 0.68
VTI1B-205ENST00000555543 BTG2P78543 158 aa19.29■□□□□ 0.68
VTI1B-205ENST00000555543 PCDH1Q08174 1060 aa19.29■□□□□ 0.68
VTI1B-205ENST00000555543 MFAP5Q13361 173 aa19.29■□□□□ 0.68
VTI1B-205ENST00000555543 LAPTM5Q13571 262 aa19.29■□□□□ 0.68
VTI1B-205ENST00000555543 RUNX2Q13950 521 aa19.29■□□□□ 0.68
VTI1B-205ENST00000555543 INPP5JQ15735 1006 aaPredicted RBP19.29■□□□□ 0.68
VTI1B-205ENST00000555543 NSDHLQ15738 373 aa19.29■□□□□ 0.68
VTI1B-205ENST00000555543 PAGE2BQ5JRK9 111 aa19.29■□□□□ 0.68
VTI1B-205ENST00000555543 ISLR2Q6UXK2 745 aa19.29■□□□□ 0.68
VTI1B-205ENST00000555543 RIPOR1Q6ZS17 1223 aa19.29■□□□□ 0.68
VTI1B-205ENST00000555543 CUZD1Q86UP6 607 aa19.29■□□□□ 0.68
VTI1B-205ENST00000555543 PPP4R1Q8TF05 950 aa19.29■□□□□ 0.68
VTI1B-205ENST00000555543 QRFPRQ96P65 431 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms