RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 PCDHGA8Q9Y5G5 932 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 ZFHX4Q86UP3 3567 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 CFAP47Q6ZTR5 3102 aa9.43□□□□□ -0.9
PSEN1-213ENST00000555386 ANKRD11Q6UB99 2663 aaPredicted RBP9.42□□□□□ -0.9
PSEN1-213ENST00000555386 IGKV1-8A0A0C4DH67 115 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 TEX51A0A1B0GUA7 166 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 FEZF1A0PJY2 475 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 LRRC14BA6NHZ5 514 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 UBFD1O14562 309 aaKnown RBP9.42□□□□□ -0.9
PSEN1-213ENST00000555386 HAT1O14929 419 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 CLGNO14967 610 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 TAPBPO15533 448 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 KLK8O60259 260 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 CTSVO60911 334 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 TIAF1O95411 115 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 NTRK1P04629 796 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 SNRPB2P08579 225 aaKnown RBP9.42□□□□□ -0.9
PSEN1-213ENST00000555386 PIM1P11309 404 aaPredicted RBP9.42□□□□□ -0.9
PSEN1-213ENST00000555386 MTHFD2P13995 350 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 NPPBP16860 134 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 VSX2P58304 361 aaPredicted RBP9.42□□□□□ -0.9
PSEN1-213ENST00000555386 STX1BP61266 288 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 PSME3P61289 254 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 ACY1Q03154 408 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 PRDX1Q06830 199 aaKnown RBP9.42□□□□□ -0.9
PSEN1-213ENST00000555386 CEACAM7Q14002 265 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 SPATS1Q496A3 300 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 CATSPEREQ5SY80 951 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 IRAK1BP1Q5VVH5 260 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 KANK2Q63ZY3 851 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 SULT1C3Q6IMI6 304 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 PWWP2BQ6NUJ5 590 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 TMEM154Q6P9G4 183 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 CEACAM20Q6UY09 585 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 RNF111Q6ZNA4 994 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 TMPRSS11BQ86T26 416 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 PPP1R3BQ86XI6 285 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 KMT5CQ86Y97 462 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 MCATQ8IVS2 390 aaKnown RBP9.42□□□□□ -0.9
PSEN1-213ENST00000555386 PTGR2Q8N8N7 351 aaPredicted RBP9.42□□□□□ -0.9
PSEN1-213ENST00000555386 OR56A3Q8NH54 315 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 OR1L3Q8NH93 324 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 ROPN1LQ96C74 230 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 ASB9Q96DX5 294 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 OR4K3Q96R72 315 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 CCT7Q99832 543 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 TMEM79Q9BSE2 394 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 SGPP1Q9BX95 441 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 ULBP3Q9BZM4 244 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 SPRTNQ9H040 489 aaPredicted RBP9.42□□□□□ -0.9
PSEN1-213ENST00000555386 ASCL3Q9NQ33 180 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 PFDN4Q9NQP4 134 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 THSD1Q9NS62 852 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 TMEM45AQ9NWC5 275 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 NUDT4Q9NZJ9 180 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 G3BP2Q9UN86 482 aaKnown RBP9.42□□□□□ -0.9
PSEN1-213ENST00000555386 ASB1Q9Y576 335 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 FER1L5A0AVI2 2057 aa9.42□□□□□ -0.9
PSEN1-213ENST00000555386 B4E171 279 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 ACOT8O14734 319 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 AZIN1O14977 448 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 STK16O75716 305 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 SORBS2O94875 1100 aaKnown RBP9.41□□□□□ -0.9
PSEN1-213ENST00000555386 SIX3O95343 332 aaPredicted RBP9.41□□□□□ -0.9
PSEN1-213ENST00000555386 CAPNS1P04632 268 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 SERPIND1P05546 499 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 RPS17P08708 135 aaKnown RBP9.41□□□□□ -0.9
PSEN1-213ENST00000555386 UQCRBP14927 111 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 ZNF28P17035 718 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 ARL1P40616 181 aaPredicted RBP9.41□□□□□ -0.9
PSEN1-213ENST00000555386 TSPAN7P41732 249 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 HNMTP50135 292 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 ITGA1P56199 1179 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 RAB15P59190 212 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 CDKL1Q00532 357 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 LCP2Q13094 533 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 TGIF1Q15583 401 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 TRIP10Q15642 601 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 TBC1D25Q3MII6 688 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 MMEL1Q495T6 779 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 AGKQ53H12 422 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 COQ5Q5HYK3 327 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 REP15Q6BDI9 236 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 FRMPD2BQ6IN97 320 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 PRMT9Q6P2P2 845 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 GK5Q6ZS86 529 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 ZNF655Q8N720 491 aaPredicted RBP9.41□□□□□ -0.9
PSEN1-213ENST00000555386 PCYOX1LQ8NBM8 494 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 PDPRQ8NCN5 879 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 ADCY4Q8NFM4 1077 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 TSPEARQ8WU66 669 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 SLC5A11Q8WWX8 675 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 ZCCHC14Q8WYQ9 949 aaKnown RBP9.41□□□□□ -0.9
PSEN1-213ENST00000555386 NEIL2Q969S2 332 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 ZUFSPQ96AP4 578 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 ZNF501Q96CX3 271 aaPredicted RBP9.41□□□□□ -0.9
PSEN1-213ENST00000555386 DUS3LQ96G46 650 aaKnown RBP9.41□□□□□ -0.9
PSEN1-213ENST00000555386 MARK4Q96L34 752 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 MACROD1Q9BQ69 325 aa9.41□□□□□ -0.9
PSEN1-213ENST00000555386 HAUS8Q9BT25 410 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms